Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041181.1 Olea europaea HOM05D004897 ORTHO05D005928 3.1e-111 405.2 215 100.0
Oeu014377.2 Olea europaea HOM05D004897 ORTHO05D005928 5.8e-49 198.4 300 46.7
Migut.D01558 Erythranthe guttata HOM05D004897 ORTHO05D005928 2.4e-39 166.4 299 42.1
Hma1.2p1_0669F.1_g200180 Hydrangea macrophylla HOM05D004897 ORTHO05D005928 1.2e-38 164.1 298 41.6
CAN.G1129.49 Capsicum annuum HOM05D004897 ORTHO05D005928 3.9e-37 159.1 300 40.3
Peaxi162Scf00683g00441 Petunia axillaris HOM05D004897 ORTHO05D005928 3.9e-37 159.1 300 41.0
CSS0030961 Camellia sinensis var. sinensis HOM05D004897 ORTHO05D005928 6.6e-37 158.3 300 42.3
SalBow1G4576 Salvia bowleyana HOM05D004897 ORTHO05D005928 1.5e-36 157.1 300 40.3
Lj9C421G3 Lonicera japonica HOM05D004897 ORTHO05D005928 2.1e-35 153.3 296 39.9
Cc04_g06380 Coffea canephora HOM05D004897 ORTHO05D005928 2.8e-35 152.9 301 39.9
Actinidia18901 Actinidia chinensis HOM05D004897 ORTHO05D005928 8.1e-35 151.4 300 38.7
COL.COLO4_16135 Corchorus olitorius HOM05D004897 ORTHO05D005928 1.8e-34 150.2 266 42.9
PGSC0003DMG400005743 Solanum tuberosum HOM05D004897 ORTHO05D005928 1.8e-34 150.2 300 40.3
MSTRG.4571 Avicennia marina HOM05D004897 ORTHO05D005928 2.3e-34 149.8 300 38.3
Hund02326 Selenicereus undatus HOM05D004897 ORTHO05D005928 2.3e-34 149.8 303 39.6
Actinidia35124 Actinidia chinensis HOM05D004897 ORTHO05D005928 3.1e-34 149.4 301 38.2
TAR622G0961 Trochodendron aralioides HOM05D004897 ORTHO05D005928 4.0e-34 149.1 303 39.3
SGA_v2.0_scaffold168G38498 Striga asiatica HOM05D004897 ORTHO05D005928 2.0e-33 146.7 300 39.0
DCAR_014009 Daucus carota HOM05D004897 ORTHO05D005928 4.4e-33 145.6 300 36.3
Glyma.05G244800 Glycine max HOM05D004897 ORTHO05D005928 4.4e-33 145.6 301 38.9
Psat7g002120 Pisum sativum HOM05D004897 ORTHO05D005928 4.4e-33 145.6 302 39.4
Glyma.08G053300 Glycine max HOM05D004897 ORTHO05D005928 1.3e-32 144.1 302 38.4
MBI12_g30398_MAGBIO Magnolia biondii HOM05D004897 ORTHO05D005928 1.7e-32 143.7 303 35.6
Lalb_Chr16g0387081 Lupinus albus HOM05D004897 ORTHO05D005928 2.9e-32 142.9 302 38.1
QL10p028331 Quercus lobata HOM05D004897 ORTHO05D005928 2.9e-32 142.9 302 39.4
Duzib084G0246 Durio zibethinus HOM05D004897 ORTHO05D005928 3.8e-32 142.5 300 38.7
Medtr8g107060 Medicago truncatula HOM05D004897 ORTHO05D005928 4.9e-32 142.1 299 37.1
Nn4g24194 Nelumbo nucifera HOM05D004897 ORTHO05D005928 6.4e-32 141.7 303 37.3
QL10p028216 Quercus lobata HOM05D004897 ORTHO05D005928 6.4e-32 141.7 302 39.1
Lalb_Chr05g0221751 Lupinus albus HOM05D004897 ORTHO05D005928 1.1e-31 141.0 300 38.3
Nitab4.5_0001456g0120 Nicotiana tabacum HOM05D004897 ORTHO05D005928 1.9e-31 140.2 323 37.2
Ca_17200_v3 Cicer arietinum L. HOM05D004897 ORTHO05D005928 2.4e-31 139.8 302 37.7
VMungo0251G1788 Vigna mungo HOM05D004897 ORTHO05D005928 3.2e-31 139.4 301 37.9
Dinv18253 Davidia involucrata HOM05D004897 ORTHO05D005928 4.1e-31 139.0 332 36.1
Manes.14G170400 Manihot esculenta HOM05D004897 ORTHO05D005928 2.1e-30 136.7 306 37.6
Potri.015G039800 Populus trichocarpa HOM05D004897 ORTHO05D005928 2.1e-30 136.7 302 38.4
Rhsim12G0138900 Rhododendron simsii HOM05D004897 ORTHO05D005928 2.1e-30 136.7 298 38.3
Lj4g0010445 Lotus japonicus HOM05D004897 ORTHO05D005928 2.7e-30 136.3 301 37.5
Sabra15G0057300 Salix brachista HOM05D004897 ORTHO05D005928 4.6e-30 135.6 301 37.5
Phvul.002G329100 Phaseolus vulgaris HOM05D004897 ORTHO05D005928 6.0e-30 135.2 302 37.1
TWI81G0456 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 6.0e-30 135.2 301 37.5
MD14G1235400 Malus domestica HOM05D004897 ORTHO05D005928 7.8e-30 134.8 303 38.0
Gorai.008G289400 Gossypium raimondii HOM05D004897 ORTHO05D005928 1.7e-29 133.7 299 37.5
arahy.Tifrunner.gnm1.ann1.Y8NJDB Arachis hypogaea HOM05D004897 ORTHO05D005928 2.3e-29 133.3 302 36.1
AUR62042935 Chenopodium quinoa HOM05D004897 ORTHO05D005928 2.3e-29 133.3 300 36.0
Nitab4.5_0006894g0040 Nicotiana tabacum HOM05D004897 ORTHO05D005928 2.3e-29 133.3 327 35.2
TWI60G0918 Tripterygium wilfordii HOM05D004897 ORTHO05D005928 2.3e-29 133.3 301 38.5
Ciclev10007731m.g Citrus clementina HOM05D004897 ORTHO05D005928 3.0e-29 132.9 303 37.3
Cfa019677 Carpinus fangiana HOM05D004897 ORTHO05D005928 3.9e-29 132.5 304 38.2
Gohir.D12G269100 Gossypium hirsutum HOM05D004897 ORTHO05D005928 3.9e-29 132.5 299 37.1
arahy.Tifrunner.gnm1.ann1.QTT902 Arachis hypogaea HOM05D004897 ORTHO05D005928 5.1e-29 132.1 302 35.4
Gohir.A12G268700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 8.6e-29 131.3 299 37.1
ECA233G2541 Erigeron canadensis HOM05D004897 ORTHO05D005928 1.1e-28 131.0 299 37.5
Atru.chr9.1748 Acer truncatum HOM05D004897 ORTHO05D005928 1.5e-28 130.6 296 37.2
Prupe.5G232100 Prunus persica HOM05D004897 ORTHO05D005928 1.9e-28 130.2 303 38.3
RcHm_v2.0_Chr7g0178571 Rosa chinensis HOM05D004897 ORTHO05D005928 1.9e-28 130.2 304 37.2
Ah.11g045250 Amaranthus hybridus HOM05D004897 ORTHO05D005928 2.5e-28 129.8 261 38.7
Thecc.03G053700 Theobroma cacao HOM05D004897 ORTHO05D005928 2.5e-28 129.8 303 38.0
ClCG06G014390 Citrullus lanatus HOM05D004897 ORTHO05D005928 3.3e-28 129.4 300 36.3
CiPaw.15G140900 Carya illinoinensis HOM05D004897 ORTHO05D005928 4.3e-28 129.0 303 36.0
Haze_18817 Corylus avellana HOM05D004897 ORTHO05D005928 4.3e-28 129.0 304 37.5
PSO017G1741 Papaver somniferum HOM05D004897 ORTHO05D005928 5.6e-28 128.6 302 35.4
PSO478G0546 Papaver somniferum HOM05D004897 ORTHO05D005928 9.6e-28 127.9 302 35.8
PGR083G0946 Punica granatum HOM05D004897 ORTHO05D005928 1.2e-27 127.5 294 36.1
MD06G1230800 Malus domestica HOM05D004897 ORTHO05D005928 2.1e-27 126.7 303 37.3
THA.LOC104812165 Tarenaya hassleriana HOM05D004897 ORTHO05D005928 6.2e-27 125.2 300 35.3
Eucgr.B00942 Eucalyptus grandis HOM05D004897 ORTHO05D005928 1.1e-26 124.4 300 34.7
FAN04G2242 Fragaria x ananassa HOM05D004897 ORTHO05D005928 1.1e-26 124.4 303 37.0
Sc10g0009320 Simmondsia chinensis HOM05D004897 ORTHO05D005928 1.4e-26 124.0 260 39.6
Gohir.A09G175700 Gossypium hirsutum HOM05D004897 ORTHO05D005928 3.1e-26 122.9 259 37.8
Aqoxy3G00106 Aquilegia oxysepala HOM05D004897 ORTHO05D005928 1.5e-25 120.6 300 36.7
BcaB07g31825 Brassica carinata HOM05D004897 ORTHO05D005928 1.5e-25 120.6 301 34.6
Sed0018128 Sechium edule HOM05D004897 ORTHO05D005928 2.0e-25 120.2 296 35.1
AT1G18190 Arabidopsis thaliana HOM05D004897 ORTHO05D005928 2.6e-25 119.8 301 35.2
FAN13G1819 Fragaria x ananassa HOM05D004897 ORTHO05D005928 2.6e-25 119.8 304 36.5
Carub.0001s1783 Capsella rubella HOM05D004897 ORTHO05D005928 3.4e-25 119.4 301 34.9
Thhalv10007004m.g Eutrema salsugineum HOM05D004897 ORTHO05D005928 3.4e-25 119.4 301 35.2
AL1G30560 Arabidopsis lyrata HOM05D004897 ORTHO05D005928 4.4e-25 119.0 301 34.9
BraA06t24553Z Brassica rapa HOM05D004897 ORTHO05D005928 7.6e-25 118.2 301 34.6
FAN18G0124 Fragaria x ananassa HOM05D004897 ORTHO05D005928 7.6e-25 118.2 304 35.9
A06p14220 Brassica napus HOM05D004897 ORTHO05D005928 1.7e-24 117.1 300 34.3
BcaC05g25714 Brassica carinata HOM05D004897 ORTHO05D005928 2.9e-24 116.3 301 33.9
C05p16500 Brassica napus HOM05D004897 ORTHO05D005928 2.9e-24 116.3 301 33.9
BolC5t30347H Brassica oleracea HOM05D004897 ORTHO05D005928 2.9e-24 116.3 301 33.9
FAN08G3076 Fragaria x ananassa HOM05D004897 ORTHO05D005928 2.9e-24 116.3 304 35.9
Sp1g16170 Schrenkiella parvula HOM05D004897 ORTHO05D005928 1.4e-23 114.0 301 34.2
TPR.G1406 Trifolium pratense HOM05D004897 ORTHO05D005928 5.4e-23 112.1 242 38.4
Aa31LG7G2880 Aethionema arabicum HOM05D004897 ORTHO05D005928 1.6e-22 110.5 331 31.1
CsaV3_1G004270 Cucumis sativus L. HOM05D004897 ORTHO05D005928 1.6e-22 110.5 295 35.3
A08p30510 Brassica napus HOM05D004897 ORTHO05D005928 2.1e-22 110.2 301 33.9
Sed0002019 Sechium edule HOM05D004897 ORTHO05D005928 3.5e-22 109.4 290 33.8
Os04g0652500 Oryza sativa ssp. japonica HOM05D004897 ORTHO05D005928 1.7e-21 107.1 300 31.7
HanXRQChr08g0227441 Helianthus annuus HOM05D004897 ORTHO05D005928 3.0e-21 106.3 297 34.7
MELO3C017351.2 Cucumis melo HOM05D004897 ORTHO05D005928 3.9e-21 105.9 294 34.4
BcaNung05436 Brassica carinata HOM05D004897 ORTHO05D005928 6.6e-21 105.1 260 36.2
vmacro16414 Vaccinium macrocarpon HOM05D004897 ORTHO05D005928 1.9e-20 103.6 166 44.6
Lsat_1_v5_gn_8_144040 Lactuca sativa HOM05D004897 ORTHO05D005928 2.5e-20 103.2 253 35.6
GSVIVG01008417001 Vitis vinifera HOM05D004897 ORTHO05D005928 2.5e-20 103.2 148 46.6
CDE05G2998 Ceratophyllum demersum HOM05D004897 ORTHO05D005928 3.3e-20 102.8 260 34.2
BraA08t34983Z Brassica rapa HOM05D004897 ORTHO05D005928 5.6e-20 102.1 260 33.5
HPP92_013368 Vanilla planifolia HOM05D004897 ORTHO05D005928 3.6e-19 99.4 301 31.9
C08p18450 Brassica napus HOM05D004897 ORTHO05D005928 4.8e-19 99.0 300 32.0
BcaC07g38902 Brassica carinata HOM05D004897 ORTHO05D005928 2.4e-18 96.7 300 32.3
Zm00001eb068130 Zea mays HOM05D004897 ORTHO05D005928 2.0e-17 93.6 259 32.4
CARHR018760 Cardamine hirsuta HOM05D004897 ORTHO05D005928 7.6e-17 91.7 158 40.5
BcaB03g12969 Brassica carinata HOM05D004897 ORTHO05D005928 8.4e-16 88.2 116 47.4
Gohir.D09G170550 Gossypium hirsutum HOM05D004897 ORTHO05D005928 1.2e-14 84.3 123 43.9
Gorai.006G192100 Gossypium raimondii HOM05D004897 ORTHO05D005928 1.2e-14 84.3 123 43.9
BolC8t49476H Brassica oleracea HOM05D004897 ORTHO05D005928 1.0e-13 81.3 163 37.4
Cpa.g.sc3.408 Carica papaya HOM05D004897 ORTHO05D005928 1.8e-13 80.5 189 39.2
Oeu041185.1 Olea europaea HOM05D004897 ORTHO05D005928 8.7e-13 78.2 56 78.6
Dinv10174 Davidia involucrata HOM05D004897 ORTHO05D005928 2.4e-10 70.1 75 56.0
GSVIVG01008418001 Vitis vinifera HOM05D004897 ORTHO05D005928 2.4e-10 70.1 51 74.5
ATR1102G018 Amborella trichopoda HOM05D004897 ORTHO05D005928 3.1e-10 69.7 242 28.5
FvH4_5g17221 Fragaria vesca HOM05D004897 ORTHO05D005928 2.0e-09 67.0 51 72.5
unitig_0.g806 Utricularia gibba HOM05D004897 ORTHO05D005928 2.9e-08 63.2 102 38.2
ATR1102G065 Amborella trichopoda HOM05D004897 ORTHO05D005928 1.4e-07 60.8 51 64.7
CARHR018770 Cardamine hirsuta HOM05D004897 ORTHO05D005928 1.4e-07 60.8 51 64.7
PGSC0003DMG403005669 Solanum tuberosum HOM05D004897 ORTHO05D005928 2.4e-07 60.1 54 61.1


User provided reference genes

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