Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu041059.3 Olea europaea HOM05D004576 ORTHO05D005321 1.1e-254 882.9 464 100.0
Oeu023658.2 Olea europaea HOM05D004576 ORTHO05D005321 7.7e-184 647.5 489 75.3
Rhsim09G0206100 Rhododendron simsii HOM05D004576 ORTHO05D005321 3.1e-164 582.4 444 71.4
CSS0008628 Camellia sinensis var. sinensis HOM05D004576 ORTHO05D005321 4.0e-164 582.0 443 71.8
SGA_v2.0_scaffold192G40533 Striga asiatica HOM05D004576 ORTHO05D005321 5.2e-164 581.6 440 72.3
CAN.G140.19 Capsicum annuum HOM05D004576 ORTHO05D005321 6.8e-164 581.3 443 69.8
Cc02_g01450 Coffea canephora HOM05D004576 ORTHO05D005321 1.2e-163 580.5 443 73.4
vmacro10126 Vaccinium macrocarpon HOM05D004576 ORTHO05D005321 9.8e-163 577.4 444 73.0
Nitab4.5_0003555g0040 Nicotiana tabacum HOM05D004576 ORTHO05D005321 1.9e-161 573.2 443 69.8
GSVIVG01038559001 Vitis vinifera HOM05D004576 ORTHO05D005321 1.6e-160 570.1 443 71.6
Dinv35342 Davidia involucrata HOM05D004576 ORTHO05D005321 4.6e-160 568.5 443 70.9
CAN.G575.13 Capsicum annuum HOM05D004576 ORTHO05D005321 1.7e-159 566.6 443 69.3
Sopen01g002110 Solanum pennellii HOM05D004576 ORTHO05D005321 2.3e-159 566.2 444 69.6
PGSC0003DMG400032187 Solanum tuberosum HOM05D004576 ORTHO05D005321 1.1e-158 563.9 444 69.4
Solyc01g006110.3 Solanum lycopersicum HOM05D004576 ORTHO05D005321 1.9e-158 563.1 444 69.1
Actinidia06144 Actinidia chinensis HOM05D004576 ORTHO05D005321 5.6e-158 561.6 438 70.5
Hund11655 Selenicereus undatus HOM05D004576 ORTHO05D005321 1.2e-157 560.5 443 68.4
CSS0016084 Camellia sinensis var. sinensis HOM05D004576 ORTHO05D005321 1.4e-156 557.0 443 70.4
Peaxi162Scf00441g00115 Petunia axillaris HOM05D004576 ORTHO05D005321 3.1e-156 555.8 443 68.8
COL.COLO4_16771 Corchorus olitorius HOM05D004576 ORTHO05D005321 4.0e-156 555.4 456 66.7
Migut.F00204 Erythranthe guttata HOM05D004576 ORTHO05D005321 5.2e-156 555.1 443 70.4
CiPaw.06G045600 Carya illinoinensis HOM05D004576 ORTHO05D005321 4.4e-155 552.0 438 70.3
SalBow4G0465 Salvia bowleyana HOM05D004576 ORTHO05D005321 7.6e-155 551.2 488 63.1
Prupe.2G309200 Prunus persica HOM05D004576 ORTHO05D005321 1.7e-154 550.1 444 68.0
Gohir.A05G415000 Gossypium hirsutum HOM05D004576 ORTHO05D005321 2.9e-154 549.3 443 67.7
Gohir.D04G001200 Gossypium hirsutum HOM05D004576 ORTHO05D005321 6.4e-154 548.1 443 67.5
Gorai.012G002200 Gossypium raimondii HOM05D004576 ORTHO05D005321 6.4e-154 548.1 443 67.5
MSTRG.27022 Avicennia marina HOM05D004576 ORTHO05D005321 3.2e-153 545.8 441 68.5
Nn1g00276 Nelumbo nucifera HOM05D004576 ORTHO05D005321 3.2e-153 545.8 443 67.5
Phvul.009G051900 Phaseolus vulgaris HOM05D004576 ORTHO05D005321 5.4e-153 545.0 438 68.9
arahy.Tifrunner.gnm1.ann1.EHU7FT Arachis hypogaea HOM05D004576 ORTHO05D005321 7.1e-153 544.7 444 66.9
arahy.Tifrunner.gnm1.ann1.S03LBS Arachis hypogaea HOM05D004576 ORTHO05D005321 7.1e-153 544.7 444 66.9
Ca_16714_v3 Cicer arietinum L. HOM05D004576 ORTHO05D005321 1.2e-152 543.9 443 66.6
Manes.07G095000 Manihot esculenta HOM05D004576 ORTHO05D005321 1.2e-152 543.9 443 68.6
RcHm_v2.0_Chr1g0380451 Rosa chinensis HOM05D004576 ORTHO05D005321 1.2e-152 543.9 447 67.8
Hma1.2p1_1587F.1_g292290 Hydrangea macrophylla HOM05D004576 ORTHO05D005321 2.1e-152 543.1 447 68.7
FAN06G0548 Fragaria x ananassa HOM05D004576 ORTHO05D005321 6.0e-152 541.6 447 67.6
Hma1.2p1_0404F.1_g145290 Hydrangea macrophylla HOM05D004576 ORTHO05D005321 7.8e-152 541.2 447 68.5
FvH4_7g31380 Fragaria vesca HOM05D004576 ORTHO05D005321 1.0e-151 540.8 447 67.3
FAN06G1560 Fragaria x ananassa HOM05D004576 ORTHO05D005321 1.7e-151 540.0 447 67.6
Psat5g076560 Pisum sativum HOM05D004576 ORTHO05D005321 6.6e-151 538.1 443 67.7
Hma1.2p1_1507F.1_g287630 Hydrangea macrophylla HOM05D004576 ORTHO05D005321 1.1e-150 537.3 444 69.4
Manes.10G051900 Manihot esculenta HOM05D004576 ORTHO05D005321 1.1e-150 537.3 443 66.4
Sc25g0000910 Simmondsia chinensis HOM05D004576 ORTHO05D005321 1.5e-150 537.0 446 67.9
MD01G1217800 Malus domestica HOM05D004576 ORTHO05D005321 1.9e-150 536.6 445 66.3
Thecc.03G200200 Theobroma cacao HOM05D004576 ORTHO05D005321 1.9e-150 536.6 443 66.8
PGR042G3016 Punica granatum HOM05D004576 ORTHO05D005321 7.3e-150 534.6 441 66.7
Glyma.04G234900 Glycine max HOM05D004576 ORTHO05D005321 2.1e-149 533.1 438 66.7
EL10Ac3g05272 Beta vulgaris HOM05D004576 ORTHO05D005321 3.6e-149 532.3 443 65.0
FAN01G2495 Fragaria x ananassa HOM05D004576 ORTHO05D005321 3.6e-149 532.3 447 66.4
FAN03G3343 Fragaria x ananassa HOM05D004576 ORTHO05D005321 4.7e-149 531.9 447 66.9
VMungo1309G0981 Vigna mungo HOM05D005525 ORTHO05D005321 4.7e-149 531.9 438 67.6
MD07G1287100 Malus domestica HOM05D004576 ORTHO05D005321 6.2e-149 531.6 445 66.3
MD07G1287400 Malus domestica HOM05D004576 ORTHO05D005321 6.2e-149 531.6 445 66.3
Potri.012G016500 Populus trichocarpa HOM05D004576 ORTHO05D005321 6.2e-149 531.6 444 67.1
Ah.07g205540 Amaranthus hybridus HOM05D004576 ORTHO05D005321 1.4e-148 530.4 443 65.5
Medtr3g091640 Medicago truncatula HOM05D004576 ORTHO05D005321 3.1e-148 529.3 444 67.1
Duzib068G0175 Durio zibethinus HOM05D004576 ORTHO05D005321 8.9e-148 527.7 438 66.0
TWI39G0751 Tripterygium wilfordii HOM05D004576 ORTHO05D005321 2.0e-147 526.6 447 65.1
Haze_00204 Corylus avellana HOM05D004576 ORTHO05D005321 2.6e-147 526.2 443 66.4
Atru.chr12.2224 Acer truncatum HOM05D004576 ORTHO05D005321 3.4e-147 525.8 440 66.4
Cfa016237 Carpinus fangiana HOM05D004576 ORTHO05D005321 4.4e-147 525.4 443 65.7
Lalb_Chr11g0066931 Lupinus albus HOM05D004576 ORTHO05D005321 4.4e-147 525.4 443 65.2
Cpa.g.sc3.95 Carica papaya HOM05D004576 ORTHO05D005321 2.2e-146 523.1 443 65.7
AUR62019411 Chenopodium quinoa HOM05D004576 ORTHO05D005321 4.9e-146 521.9 443 64.3
TPR.G18754 Trifolium pratense HOM05D004576 ORTHO05D005321 8.4e-146 521.2 430 66.5
TAR633G0881 Trochodendron aralioides HOM05D004576 ORTHO05D005321 8.4e-146 521.2 439 66.1
TAR629G2734 Trochodendron aralioides HOM05D004576 ORTHO05D005321 1.9e-145 520.0 443 67.0
Nitab4.5_0005477g0060 Nicotiana tabacum HOM05D004576 ORTHO05D005321 9.3e-145 517.7 443 64.1
CANSAT21G1766 Cannabis sativa HOM05D004576 ORTHO05D005321 1.6e-144 516.9 446 64.6
Eucgr.A01454 Eucalyptus grandis HOM05D004576 ORTHO05D005321 1.6e-144 516.9 443 65.2
Lj4g0015379 Lotus japonicus HOM05D004576 ORTHO05D005321 1.3e-143 513.8 440 65.7
MELO3C021489.2 Cucumis melo HOM05D004576 ORTHO05D005321 8.7e-143 511.1 439 64.9
HanXRQChr07g0206441 Helianthus annuus HOM05D004576 ORTHO05D005321 1.5e-142 510.4 448 64.5
QL09p008710 Quercus lobata HOM05D004576 ORTHO05D005321 3.3e-142 509.2 477 60.2
THA.LOC104799972 Tarenaya hassleriana HOM05D004576 ORTHO05D005321 5.6e-142 508.4 438 66.7
ClCG09G018570 Citrullus lanatus HOM05D004576 ORTHO05D005321 3.6e-141 505.8 439 64.5
unitig_748.g7294 Utricularia gibba HOM05D004576 ORTHO05D005321 3.6e-141 505.8 443 64.1
Aqoxy7G00528 Aquilegia oxysepala HOM05D004576 ORTHO05D005321 8.1e-141 504.6 443 63.7
Aa31LG9G16760 Aethionema arabicum HOM05D004576 ORTHO05D005321 1.4e-140 503.8 440 64.8
Sed0009575 Sechium edule HOM05D004576 ORTHO05D005321 3.1e-140 502.7 440 64.1
Gohir.D12G250200 Gossypium hirsutum HOM05D004576 ORTHO05D005321 2.0e-139 500.0 443 61.9
Gorai.008G268300 Gossypium raimondii HOM05D004576 ORTHO05D005321 2.0e-139 500.0 443 61.9
DCAR_020325 Daucus carota HOM05D004576 ORTHO05D005321 3.4e-139 499.2 444 66.4
Ciclev10020388m.g Citrus clementina HOM05D004576 ORTHO05D005321 5.8e-139 498.4 449 62.1
CsaV3_5G037660 Cucumis sativus L. HOM05D004576 ORTHO05D005321 1.3e-138 497.3 439 62.2
ECA238G3082 Erigeron canadensis HOM05D004576 ORTHO05D005321 1.7e-138 496.9 444 63.7
Potri.015G012200 Populus trichocarpa HOM05D004576 ORTHO05D005321 8.4e-138 494.6 440 64.3
Thhalv10013705m.g Eutrema salsugineum HOM05D004576 ORTHO05D005321 1.4e-137 493.8 444 64.0
PSO063G4456 Papaver somniferum HOM05D004576 ORTHO05D005321 5.4e-137 491.9 444 60.4
AUR62006083 Chenopodium quinoa HOM05D004576 ORTHO05D005321 1.6e-136 490.3 443 61.4
Os12g0137500 Oryza sativa ssp. japonica HOM05D004576 ORTHO05D005321 4.6e-136 488.8 436 61.0
HPP92_010727 Vanilla planifolia HOM05D004576 ORTHO05D005321 6.0e-136 488.4 440 61.8
MBI06_g10867_MAGBIO Magnolia biondii HOM05D004576 ORTHO05D005321 7.9e-136 488.0 469 58.4
CARHR265990 Cardamine hirsuta HOM05D004576 ORTHO05D005321 1.7e-135 486.9 444 62.6
AT5G53000 Arabidopsis thaliana HOM05D004576 ORTHO05D005321 3.9e-135 485.7 444 63.1
A10p10480 Brassica napus HOM05D004576 ORTHO05D005321 5.1e-135 485.3 444 63.1
C09p42710 Brassica napus HOM05D004576 ORTHO05D005321 5.1e-135 485.3 444 63.1
ATR0763G025 Amborella trichopoda HOM05D004576 ORTHO05D005321 6.6e-135 485.0 444 61.0
Sed0014456 Sechium edule HOM05D004576 ORTHO05D005321 6.6e-135 485.0 440 62.5
BolC9t57147H Brassica oleracea HOM05D004576 ORTHO05D005321 1.1e-134 484.2 444 63.1
Sp6g15160 Schrenkiella parvula HOM05D004576 ORTHO05D005321 3.3e-134 482.6 439 63.6
BraA10t43131Z Brassica rapa HOM05D004576 ORTHO05D005321 4.3e-134 482.3 444 62.6
AL8G27600 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 4.8e-133 478.8 450 62.2
AL4G21090 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 6.2e-133 478.4 444 62.4
Zm00001eb093250 Zea mays HOM05D004576 ORTHO05D005321 6.2e-133 478.4 436 58.9
Lj3C903T12 Lonicera japonica HOM05D004576 ORTHO05D005321 1.1e-132 477.6 445 63.1
Lsat_1_v5_gn_2_136141 Lactuca sativa HOM05D004576 ORTHO05D005321 3.1e-132 476.1 443 61.6
PSO170G5996 Papaver somniferum HOM05D004576 ORTHO05D005321 4.5e-131 472.2 444 58.6
CDE02G4477 Ceratophyllum demersum HOM05D004576 ORTHO05D005321 3.2e-129 466.1 443 58.5
BcaC04g20518 Brassica carinata HOM05D004576 ORTHO05D005321 4.2e-129 465.7 443 61.9
Gohir.A12G249400 Gossypium hirsutum HOM05D004576 ORTHO05D005321 1.0e-127 461.1 443 58.7
Carub.0008s1320 Capsella rubella HOM05D004576 ORTHO05D005321 1.3e-127 460.7 444 59.7
Lsat_1_v5_gn_3_139541 Lactuca sativa HOM05D004576 ORTHO05D005321 3.9e-127 459.1 447 59.5
Sabra15G0009800 Salix brachista HOM05D004576 ORTHO05D005321 5.1e-127 458.8 411 64.7
Zm00001eb196410 Zea mays HOM05D004576 ORTHO05D005321 9.0e-124 448.0 437 56.3
SEGI_39808 Sequoiadendron giganteum HOM05D004576 ORTHO05D005321 2.9e-122 443.0 443 54.2
PSO170G4165 Papaver somniferum HOM05D004576 ORTHO05D005321 1.9e-121 440.3 409 59.2
Nitab4.5_0001620g0020 Nicotiana tabacum HOM05D004576 ORTHO05D005321 1.3e-114 417.5 478 55.6
Medtr1g050518 Medicago truncatula HOM05D004576 ORTHO05D005321 1.9e-113 413.7 368 64.7
AL8G27540 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 5.1e-111 405.6 512 51.6
PGSC0003DMG400004286 Solanum tuberosum HOM05D004576 ORTHO05D005321 5.1e-111 405.6 331 67.1
Glyma.06G129650 Glycine max HOM05D005525 ORTHO05D006341 2.8e-109 399.8 384 58.9
Os11g0141000 Oryza sativa ssp. japonica HOM05D004576 ORTHO05D005321 1.5e-107 394.0 353 62.0
SHI02368 Sapria himalayana HOM05D004576 ORTHO05D005321 2.2e-101 373.6 473 50.5
BolC2t08029H Brassica oleracea HOM05D004576 ORTHO05D005321 5.5e-97 359.0 440 52.5
SMO118G0543 Selaginella moellendorffii HOM05D004576 ORTHO05D005321 2.3e-95 353.6 443 47.2
Pp3c27_2200 Physcomitrium patens HOM05D004576 ORTHO05D005321 6.1e-88 328.9 444 45.5
Pp3c27_2230 Physcomitrium patens HOM05D004576 ORTHO05D005321 6.1e-88 328.9 444 45.5
CiPaw.05G197500 Carya illinoinensis HOM05D004576 ORTHO05D005321 1.3e-85 321.2 439 50.8
AagrBONN_evm.TU.Sc2ySwM_368.1428 Anthoceros agrestis HOM05D004576 ORTHO05D005321 1.2e-78 298.1 437 43.0
Mapoly0036s0077 Marchantia polymorpha HOM05D004576 ORTHO05D005321 1.4e-76 291.2 448 40.4
Dinv29270 Davidia involucrata HOM05D004576 ORTHO05D005321 1.7e-74 284.3 193 80.3
BcaC03g14466 Brassica carinata HOM05D004576 ORTHO05D005321 9.2e-68 261.9 441 42.9
MBI07_g24780_MAGBIO Magnolia biondii HOM05D004576 ORTHO05D005321 2.1e-64 250.8 403 41.7
MBI07_g45568_MAGBIO Magnolia biondii HOM05D004576 ORTHO05D005321 2.3e-58 230.7 350 43.7
CBR_g54194 Chara braunii HOM05D004576 ORTHO05D005321 7.8e-51 205.7 460 35.7
AL4G21010 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 3.0e-50 203.8 153 73.2
C02p18880 Brassica napus HOM05D004576 ORTHO05D005321 3.6e-48 196.8 306 45.4
AL4G21000 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 1.8e-39 167.9 149 65.1
SGA_v2.0_scaffold44G16809 Striga asiatica HOM05D004576 ORTHO05D005321 1.1e-33 148.7 104 76.9
Lj1g0016726 Lotus japonicus HOM05D004576 ORTHO05D005321 2.5e-25 120.9 128 51.6
ATR0602G017 Amborella trichopoda HOM05D004576 ORTHO05D005321 9.0e-23 112.5 95 56.8
CSS0039200 Camellia sinensis var. sinensis HOM05D004576 ORTHO05D005321 3.4e-22 110.5 73 74.0
Actinidia08655 Actinidia chinensis HOM05D004576 ORTHO05D005321 2.2e-21 107.8 94 61.7
TAR636G2906 Trochodendron aralioides HOM05D004576 ORTHO05D005321 4.6e-19 100.1 78 74.4
AL4G21040 Arabidopsis lyrata HOM05D004576 ORTHO05D005321 6.0e-19 99.8 189 40.7
CAN.G140.18 Capsicum annuum HOM05D004576 ORTHO05D005321 1.3e-16 92.0 60 73.3
TPR.G19381 Trifolium pratense HOM05D000003 ORTHO05D000004 4.8e-16 90.1 59 72.9
ATR0602G122 Amborella trichopoda HOM05D004576 ORTHO05D005321 1.8e-15 88.2 68 60.3
MCO15G223 Micromonas commoda HOM05D004576 ORTHO05D005321 1.0e-10 72.4 458 25.8
BcaB05g21998 Brassica carinata HOM05D004576 ORTHO05D005321 8.7e-10 69.3 76 56.6
CDE08G1665 Ceratophyllum demersum HOM05D004576 ORTHO05D005321 1.9e-09 68.2 70 57.1
PRCOL_00002440 Prasinoderma coloniale HOM05D004576 ORTHO05D005321 2.1e-08 64.7 491 23.8


User provided reference genes

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