Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040969.1 Olea europaea HOM05D004756 ORTHO05D005793 4.0e-93 344.7 174 100.0
Nitab4.5_0001402g0150 Nicotiana tabacum HOM05D004756 ORTHO05D005793 2.8e-30 136.0 65 98.5
Lj7A537T48 Lonicera japonica HOM05D004756 ORTHO05D005793 4.8e-30 135.2 64 100.0
unitig_62.g23111 Utricularia gibba HOM05D004756 ORTHO05D005793 4.8e-30 135.2 64 100.0
Hund00823 Selenicereus undatus HOM05D004756 ORTHO05D005793 6.3e-30 134.8 96 74.0
Atru.chr2.885 Acer truncatum HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Actinidia12823 Actinidia chinensis HOM05D000054 ORTHO05D005793 1.1e-29 134.0 65 98.5
Ah.15g093660 Amaranthus hybridus HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
arahy.Tifrunner.gnm1.ann1.2YXN00 Arachis hypogaea HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
MSTRG.15061 Avicennia marina HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
EL10Ac9g21026 Beta vulgaris HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
CSS0029039 Camellia sinensis var. sinensis HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
CAN.G449.74 Capsicum annuum HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
CAN.G577.1 Capsicum annuum HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
AUR62024000 Chenopodium quinoa HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Ca_02704_v3 Cicer arietinum L. HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Cc05_g09050 Coffea canephora HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Migut.M00214 Erythranthe guttata HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Glyma.06G217200 Glycine max HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
HanXRQChr01g0015131 Helianthus annuus HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
MD04G1227700 Malus domestica HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Manes.07G069500 Manihot esculenta HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Medtr2g058550 Medicago truncatula HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Oeu011324.1 Olea europaea HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Peaxi162Scf00035g03127 Petunia axillaris HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Phvul.011G079900 Phaseolus vulgaris HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Psat0s4043g0080 Pisum sativum HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Potri.019G014000 Populus trichocarpa HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
PGR142G3409 Punica granatum HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
RcHm_v2.0_Chr3g0450151 Rosa chinensis HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Sabra19G0016400 Salix brachista HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Sabra19G0026700 Salix brachista HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Sc21g0004350 Simmondsia chinensis HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
TWI56G0480 Tripterygium wilfordii HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
TAR636G3098 Trochodendron aralioides HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
VMungo1127G1235 Vigna mungo HOM05D000724 ORTHO05D000755 1.1e-29 134.0 65 98.5
GSVIVG01036218001 Vitis vinifera HOM05D004756 ORTHO05D005793 1.1e-29 134.0 65 98.5
Aa31LG8G10570 Aethionema arabicum HOM05D004756 ORTHO05D005793 1.8e-29 133.3 69 89.9
CANSAT54G2478 Cannabis sativa HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
Cfa006386 Carpinus fangiana HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
CiPaw.07G070600 Carya illinoinensis HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
Ciclev10020437m.g Citrus clementina HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
Ciclev10020741m.g Citrus clementina HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
Haze_04391 Corylus avellana HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
Dinv06277 Davidia involucrata HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
Eucgr.H00259 Eucalyptus grandis HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
Eucgr.L01375 Eucalyptus grandis HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
FvH4_5g04770 Fragaria vesca HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
FvH4_6g02380 Fragaria vesca HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
FAN02G1286 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
FAN04G1391 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
FAN05G2727 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
FAN05G3615 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
FAN08G1019 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
FAN13G2410 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
FAN14G0694 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
FAN14G4094 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
FAN18G1570 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
Lsat_1_v5_gn_5_179521 Lactuca sativa HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
Nn2g12710 Nelumbo nucifera HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
Nitab4.5_0002027g0100 Nicotiana tabacum HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
QL03p029131 Quercus lobata HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
SGA_v2.0_scaffold130G34203 Striga asiatica HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
TPR.G15315 Trifolium pratense HOM05D004756 ORTHO05D005793 2.4e-29 132.9 65 96.9
vmacro12429 Vaccinium macrocarpon HOM05D004756 ORTHO05D005793 2.4e-29 132.9 73 89.0
Ciclev10021567m.g Citrus clementina HOM05D004756 ORTHO05D005793 3.1e-29 132.5 65 95.4
Duzib128G2034 Durio zibethinus HOM05D004756 ORTHO05D005793 3.1e-29 132.5 65 96.9
Gohir.A11G250480 Gossypium hirsutum HOM05D004756 ORTHO05D005793 3.1e-29 132.5 65 96.9
Gohir.A11G250600 Gossypium hirsutum HOM05D004756 ORTHO05D005793 3.1e-29 132.5 65 96.9
Gorai.007G279800 Gossypium raimondii HOM05D004756 ORTHO05D005793 3.1e-29 132.5 65 96.9
Solyc10g007850.3 Solanum lycopersicum HOM05D004756 ORTHO05D005793 3.1e-29 132.5 65 96.9
Sopen10g003750 Solanum pennellii HOM05D004756 ORTHO05D005793 3.1e-29 132.5 65 96.9
PGSC0003DMG400021238 Solanum tuberosum HOM05D004756 ORTHO05D005793 3.1e-29 132.5 65 96.9
THA.LOC104808029 Tarenaya hassleriana HOM05D004756 ORTHO05D005793 3.1e-29 132.5 65 96.9
Thecc.05G277000 Theobroma cacao HOM05D004756 ORTHO05D005793 3.1e-29 132.5 65 96.9
Aqoxy2G03592 Aquilegia oxysepala HOM05D004756 ORTHO05D005793 5.4e-29 131.7 65 95.4
DCAR_010735 Daucus carota HOM05D004756 ORTHO05D005793 5.4e-29 131.7 65 96.9
Lj7A536T7 Lonicera japonica HOM05D004756 ORTHO05D005793 5.4e-29 131.7 64 98.4
Rhsim06G0122800 Rhododendron simsii HOM05D004756 ORTHO05D005793 5.4e-29 131.7 63 98.4
AL1G19180 Arabidopsis lyrata HOM05D004756 ORTHO05D005793 7.0e-29 131.3 65 95.4
AT1G08750 Arabidopsis thaliana HOM05D004756 ORTHO05D005793 7.0e-29 131.3 65 95.4
Carub.0001s0809 Capsella rubella HOM05D004756 ORTHO05D005793 7.0e-29 131.3 65 95.4
CARHR008670 Cardamine hirsuta HOM05D004756 ORTHO05D005793 7.0e-29 131.3 65 95.4
Thhalv10007907m.g Eutrema salsugineum HOM05D004756 ORTHO05D005793 7.0e-29 131.3 65 95.4
Lj6g0025011 Lotus japonicus HOM05D004756 ORTHO05D005793 7.0e-29 131.3 65 95.4
Lalb_Chr08g0234301 Lupinus albus HOM05D004756 ORTHO05D005793 7.0e-29 131.3 65 95.4
arahy.Tifrunner.gnm1.ann1.N732CA Arachis hypogaea HOM05D004756 ORTHO05D005793 9.1e-29 131.0 65 96.9
PSO528G0135 Papaver somniferum HOM05D004756 ORTHO05D005793 1.2e-28 130.6 65 95.4
BcaB03g13316 Brassica carinata HOM05D004756 ORTHO05D005793 1.6e-28 130.2 65 93.8
BcaNung06265 Brassica carinata HOM05D000200 ORTHO05D005793 1.6e-28 130.2 64 93.8
Ciclev10024315m.g Citrus clementina HOM05D004756 ORTHO05D005793 1.6e-28 130.2 65 93.8
Sp1g07390 Schrenkiella parvula HOM05D004756 ORTHO05D005793 1.6e-28 130.2 65 93.8
PGSC0003DMG400011666 Solanum tuberosum HOM05D004756 ORTHO05D005793 1.6e-28 130.2 65 93.8
Ciclev10023432m.g Citrus clementina HOM05D004756 ORTHO05D005793 2.0e-28 129.8 65 95.4
SEGI_24335 Sequoiadendron giganteum HOM05D004756 ORTHO05D005793 2.0e-28 129.8 65 93.8
HPP92_018816 Vanilla planifolia HOM05D004756 ORTHO05D005793 2.7e-28 129.4 65 93.8
A06p05660 Brassica napus HOM05D004756 ORTHO05D005793 3.5e-28 129.0 65 92.3
C05p06830 Brassica napus HOM05D004756 ORTHO05D005793 3.5e-28 129.0 65 92.3
BolC5t29441H Brassica oleracea HOM05D004756 ORTHO05D005793 3.5e-28 129.0 65 92.3
BraA06t23775Z Brassica rapa HOM05D004756 ORTHO05D005793 3.5e-28 129.0 65 92.3
PSO170G6485 Papaver somniferum HOM05D004756 ORTHO05D005793 3.5e-28 129.0 65 93.8
CDE06G0731 Ceratophyllum demersum HOM05D004756 ORTHO05D005793 4.5e-28 128.6 65 93.8
Os02g0219400 Oryza sativa ssp. japonica HOM05D004756 ORTHO05D005793 4.5e-28 128.6 65 93.8
Zm00001eb205610 Zea mays HOM05D004756 ORTHO05D005793 4.5e-28 128.6 65 93.8
ATR0665G165 Amborella trichopoda HOM05D004756 ORTHO05D005793 5.9e-28 128.3 63 95.2
Mapoly0092s0030 Marchantia polymorpha HOM05D004756 ORTHO05D005793 5.9e-28 128.3 63 95.2
C08p49840 Brassica napus HOM05D000239 ORTHO05D000484 1.7e-27 126.7 62 93.5
ClCG06G009440 Citrullus lanatus HOM05D004756 ORTHO05D005793 1.7e-27 126.7 63 92.1
MELO3C024666.2 Cucumis melo HOM05D004756 ORTHO05D005793 1.7e-27 126.7 63 92.1
CsaV3_1G045570 Cucumis sativus L. HOM05D004756 ORTHO05D005793 1.7e-27 126.7 63 92.1
Sed0006035 Sechium edule HOM05D004756 ORTHO05D005793 1.7e-27 126.7 84 75.0
SHI31380 Sapria himalayana HOM05D004756 ORTHO05D005793 2.3e-27 126.3 63 93.7
Sed0000709 Sechium edule HOM05D004756 ORTHO05D005793 2.3e-27 126.3 63 92.1
Sed0007432 Sechium edule HOM05D004756 ORTHO05D005793 2.3e-27 126.3 63 92.1
Sed0019802 Sechium edule HOM05D004756 ORTHO05D005793 2.3e-27 126.3 63 92.1
Sed0025298 Sechium edule HOM05D004756 ORTHO05D005793 2.3e-27 126.3 63 92.1
Prupe.6G347300 Prunus persica HOM05D004756 ORTHO05D005793 9.5e-26 120.9 58 100.0
Pp3c9_23730 Physcomitrium patens HOM05D004756 ORTHO05D005793 1.2e-25 120.6 63 88.9
AagrBONN_evm.TU.Sc2ySwM_228.4219 Anthoceros agrestis HOM05D004756 ORTHO05D005793 2.1e-25 119.8 63 88.9
Ciclev10021087m.g Citrus clementina HOM05D004756 ORTHO05D005793 2.1e-25 119.8 58 98.3
COL.COLO4_15415 Corchorus olitorius HOM05D004756 ORTHO05D005793 2.1e-25 119.8 58 98.3
ECA248G2407 Erigeron canadensis HOM05D004756 ORTHO05D005793 2.1e-25 119.8 58 98.3
CBR_g39523 Chara braunii HOM05D004756 ORTHO05D005793 4.7e-25 118.6 63 88.9
Glyma.04G156000 Glycine max HOM05D004756 ORTHO05D005793 8.0e-25 117.9 58 98.3
Medtr1g085630 Medicago truncatula HOM05D004756 ORTHO05D005793 1.0e-24 117.5 65 83.1
SMO356G0549 Selaginella moellendorffii HOM05D004756 ORTHO05D005793 1.8e-24 116.7 63 84.1
Mapoly0069s0027 Marchantia polymorpha HOM05D004756 ORTHO05D005793 3.0e-24 115.9 58 94.8
BraA09t41921Z Brassica rapa HOM05D000239 ORTHO05D000484 1.5e-23 113.6 62 87.1
MCO16G186 Micromonas commoda HOM05D004756 ORTHO05D005793 8.3e-22 107.8 74 67.6
AUR62031783 Chenopodium quinoa HOM05D004756 ORTHO05D005793 7.0e-21 104.8 53 94.3
Cfa024521 Carpinus fangiana HOM05D004756 ORTHO05D005793 9.2e-21 104.4 65 72.3
FAN09G0888 Fragaria x ananassa HOM05D004756 ORTHO05D005793 2.7e-20 102.8 49 98.0
Rhsim09G0040000 Rhododendron simsii HOM05D004756 ORTHO05D005793 4.5e-20 102.1 53 92.5
FvH4_6g02400 Fragaria vesca HOM05D004756 ORTHO05D005793 1.3e-19 100.5 67 74.6
A09p65770 Brassica napus HOM05D000239 ORTHO05D001037 1.7e-19 100.1 54 87.0
Cre03.g153800 Chlamydomonas reinhardtii HOM05D004756 ORTHO05D005793 7.3e-18 94.7 65 64.6
FvH4_6g02430 Fragaria vesca HOM05D004756 ORTHO05D005793 1.6e-12 77.0 40 92.5
CDE07G1473 Ceratophyllum demersum HOM05D004756 ORTHO05D005793 4.6e-12 75.5 35 97.1
Lsat_1_v5_gn_8_58941 Lactuca sativa HOM05D004756 ORTHO05D005793 1.7e-11 73.6 44 79.5
BolC8t52512H Brassica oleracea HOM05D004756 ORTHO05D005793 3.9e-11 72.4 35 88.6
Mapoly0092s0019 Marchantia polymorpha HOM05D004756 ORTHO05D005793 1.9e-10 70.1 34 91.2
TPR.G3069 Trifolium pratense HOM05D004756 ORTHO05D005793 3.4e-07 59.3 58 55.2
Haze_27491 Corylus avellana HOM05D004756 ORTHO05D005793 9.8e-07 57.8 35 68.6
Lj1g0017410 Lotus japonicus HOM05D000927 ORTHO05D000850 9.8e-07 57.8 51 45.1
Lj1g0016562 Lotus japonicus HOM05D000927 ORTHO05D000850 2.2e-06 56.6 50 46.0


User provided reference genes

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