Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040958.1 Olea europaea HOM05D000001 ORTHO05D004986 1.3e-123 446.4 230 100.0
Oeu052385.1 Olea europaea HOM05D000001 ORTHO05D004986 1.8e-101 372.9 230 83.5
CAN.G638.28 Capsicum annuum HOM05D000001 ORTHO05D004986 9.1e-93 344.0 225 79.6
PGSC0003DMG400013419 Solanum tuberosum HOM05D000001 ORTHO05D004986 1.2e-92 343.6 225 78.2
Solyc03g005800.4 Solanum lycopersicum HOM05D000001 ORTHO05D004986 2.0e-92 342.8 225 78.2
Migut.M00942 Erythranthe guttata HOM05D000001 ORTHO05D004986 1.3e-91 340.1 223 76.7
Sopen03g001840 Solanum pennellii HOM05D000001 ORTHO05D004986 1.3e-91 340.1 225 76.4
SalBow8G4638 Salvia bowleyana HOM05D000001 ORTHO05D004986 1.9e-90 336.3 223 74.4
SalBow8G5585 Salvia bowleyana HOM05D000001 ORTHO05D004986 1.9e-90 336.3 223 74.4
MSTRG.16212 Avicennia marina HOM05D000001 ORTHO05D004986 5.5e-90 334.7 225 75.6
Manes.17G066600 Manihot esculenta HOM05D000001 ORTHO05D004986 1.0e-88 330.5 225 74.2
SGA_v2.0_scaffold333G49009 Striga asiatica HOM05D000001 ORTHO05D004986 3.0e-88 328.9 224 75.0
Dinv32284 Davidia involucrata HOM05D000001 ORTHO05D009595 5.7e-87 324.7 225 73.8
Dinv05246 Davidia involucrata HOM05D000001 ORTHO05D004986 7.4e-87 324.3 224 74.1
QL12p004541 Quercus lobata HOM05D000001 ORTHO05D004986 9.7e-87 323.9 215 76.3
Nitab4.5_0020993g0010 Nicotiana tabacum HOM05D000001 ORTHO05D004986 1.3e-86 323.6 223 73.1
Cc06_g17960 Coffea canephora HOM05D000001 ORTHO05D004986 2.8e-86 322.4 224 74.6
GSVIVG01021402001 Vitis vinifera HOM05D000001 ORTHO05D004986 4.8e-86 321.6 223 72.2
CiPaw.10G094900 Carya illinoinensis HOM05D000001 ORTHO05D004986 1.1e-85 320.5 216 73.6
QL08p032320 Quercus lobata HOM05D000001 ORTHO05D004986 4.1e-85 318.5 222 73.0
vmacro17922 Vaccinium macrocarpon HOM05D000001 ORTHO05D004986 5.3e-85 318.2 225 72.4
VMungo1215G3010 Vigna mungo HOM05D000001 ORTHO05D004986 2.0e-84 316.2 217 72.8
Hma1.2p1_0835F.1_g225806 Hydrangea macrophylla HOM05D000001 ORTHO05D004986 2.6e-84 315.8 226 70.8
Lj2g0023818 Lotus japonicus HOM05D000001 ORTHO05D004986 3.5e-84 315.5 226 73.0
COL.COLO4_07499 Corchorus olitorius HOM05D000001 ORTHO05D004986 4.5e-84 315.1 227 70.5
vmacro13003 Vaccinium macrocarpon HOM05D000001 ORTHO05D004986 7.7e-84 314.3 225 71.1
Atru.chr10.1353 Acer truncatum HOM05D000001 ORTHO05D004986 1.0e-83 313.9 220 70.9
Gohir.A10G038800 Gossypium hirsutum HOM05D000001 ORTHO05D004986 1.3e-83 313.5 228 71.1
Gorai.011G041800 Gossypium raimondii HOM05D000001 ORTHO05D004986 1.3e-83 313.5 228 70.6
Cfa000981 Carpinus fangiana HOM05D000001 ORTHO05D004986 1.7e-83 313.2 219 74.9
Glyma.09G206400 Glycine max HOM05D000001 ORTHO05D004986 2.2e-83 312.8 213 73.7
Peaxi162Scf00778g00312 Petunia axillaris HOM05D000001 ORTHO05D004986 2.2e-83 312.8 255 65.5
Gohir.D10G039700 Gossypium hirsutum HOM05D000001 ORTHO05D004986 2.9e-83 312.4 228 70.2
Phvul.002G139300 Phaseolus vulgaris HOM05D000001 ORTHO05D004986 3.8e-83 312.0 217 71.9
TPR.G8082 Trifolium pratense HOM05D000001 ORTHO05D004986 1.1e-82 310.5 220 73.2
FAN16G0100 Fragaria x ananassa HOM05D000001 ORTHO05D004986 1.5e-82 310.1 239 67.4
FvH4_3g06150 Fragaria vesca HOM05D000001 ORTHO05D004986 1.9e-82 309.7 239 66.9
FAN21G2879 Fragaria x ananassa HOM05D000001 ORTHO05D004986 1.9e-82 309.7 239 66.9
Glyma.06G034800 Glycine max HOM05D000001 ORTHO05D004986 1.9e-82 309.7 217 72.8
unitig_32.g11435 Utricularia gibba HOM05D000001 ORTHO05D004986 1.9e-82 309.7 225 70.2
HanXRQChr09g0248611 Helianthus annuus HOM05D000001 ORTHO05D004986 2.5e-82 309.3 230 70.9
Medtr2g103770 Medicago truncatula HOM05D000001 ORTHO05D004986 2.5e-82 309.3 210 74.8
Glyma.01G016400 Glycine max HOM05D000001 ORTHO05D004986 3.2e-82 308.9 219 71.7
Lsat_1_v5_gn_0_21141 Lactuca sativa HOM05D002527 ORTHO05D004986 7.2e-82 307.8 224 71.0
Lalb_Chr22g0354111 Lupinus albus HOM05D000001 ORTHO05D004986 7.2e-82 307.8 222 72.5
FAN11G3616 Fragaria x ananassa HOM05D000001 ORTHO05D004986 9.4e-82 307.4 223 69.1
Haze_05536 Corylus avellana HOM05D000001 ORTHO05D004986 1.2e-81 307.0 233 69.1
Nitab4.5_0002814g0060 Nicotiana tabacum HOM05D000001 ORTHO05D004986 1.2e-81 307.0 225 69.8
TPR.G37137 Trifolium pratense HOM05D000001 ORTHO05D004986 1.6e-81 306.6 210 74.3
Cpa.g.sc116.50 Carica papaya HOM05D000001 ORTHO05D004986 2.1e-81 306.2 221 68.8
TAR624G0170 Trochodendron aralioides HOM05D000001 ORTHO05D004986 2.1e-81 306.2 222 70.7
Ah.14g088450 Amaranthus hybridus HOM05D000001 ORTHO05D004986 2.7e-81 305.8 223 70.9
Rhsim01G0128700 Rhododendron simsii HOM05D000001 ORTHO05D004986 2.7e-81 305.8 240 66.7
CARHR224980 Cardamine hirsuta HOM05D000001 ORTHO05D004986 4.7e-81 305.1 224 68.8
Eucgr.E02385 Eucalyptus grandis HOM05D000001 ORTHO05D004986 6.1e-81 304.7 221 71.0
THA.LOC104807170 Tarenaya hassleriana HOM05D000001 ORTHO05D004986 6.1e-81 304.7 228 70.6
AT4G18230 Arabidopsis thaliana HOM05D000001 ORTHO05D004986 8.0e-81 304.3 223 70.0
CsaV3_3G001520 Cucumis sativus L. HOM05D000001 ORTHO05D004986 8.0e-81 304.3 225 69.8
TAR626G1778 Trochodendron aralioides HOM05D000001 ORTHO05D004986 8.0e-81 304.3 222 69.8
HanXRQChr11g0348471 Helianthus annuus HOM05D000001 ORTHO05D004986 1.0e-80 303.9 228 69.3
PSO210G2371 Papaver somniferum HOM05D000001 ORTHO05D004986 2.3e-80 302.8 223 67.7
Ciclev10016572m.g Citrus clementina HOM05D000001 ORTHO05D004986 3.0e-80 302.4 223 68.6
Gohir.A09G078100 Gossypium hirsutum HOM05D000001 ORTHO05D004986 3.0e-80 302.4 222 70.7
PGR042G2866 Punica granatum HOM05D000001 ORTHO05D004986 4.0e-80 302.0 216 70.8
Gorai.006G093500 Gossypium raimondii HOM05D000001 ORTHO05D004986 5.2e-80 301.6 222 70.7
Duzib235G0686 Durio zibethinus HOM05D000001 ORTHO05D004986 8.8e-80 300.8 216 70.4
RcHm_v2.0_Chr5g0013201 Rosa chinensis HOM05D000001 ORTHO05D004986 8.8e-80 300.8 227 68.7
TWI75G1193 Tripterygium wilfordii HOM05D000001 ORTHO05D004986 8.8e-80 300.8 222 70.3
AL7G36180 Arabidopsis lyrata HOM05D000001 ORTHO05D004986 1.2e-79 300.4 223 69.1
Carub.0007s2310 Capsella rubella HOM05D000001 ORTHO05D004986 1.2e-79 300.4 222 69.4
Thhalv10026141m.g Eutrema salsugineum HOM05D000001 ORTHO05D004986 1.2e-79 300.4 222 69.4
PSO210G1957 Papaver somniferum HOM05D000001 ORTHO05D004986 1.5e-79 300.1 224 67.9
CDE04G3124 Ceratophyllum demersum HOM05D000001 ORTHO05D004986 2.0e-79 299.7 224 69.6
MD05G1289800 Malus domestica HOM05D000001 ORTHO05D004986 2.0e-79 299.7 227 67.8
Aqoxy3G02543 Aquilegia oxysepala HOM05D000001 ORTHO05D004986 4.4e-79 298.5 227 68.7
EL10Ac7g17433 Beta vulgaris HOM05D000001 ORTHO05D004986 4.4e-79 298.5 221 69.7
PSO541G0137 Papaver somniferum HOM05D000001 ORTHO05D004986 4.4e-79 298.5 224 68.3
THA.LOC104812842 Tarenaya hassleriana HOM05D000001 ORTHO05D004986 4.4e-79 298.5 221 66.5
Potri.001G352000 Populus trichocarpa HOM05D000001 ORTHO05D004986 5.7e-79 298.1 225 68.4
Sabra16G0231400 Salix brachista HOM05D000001 ORTHO05D004986 5.7e-79 298.1 226 68.6
Sp7g15880 Schrenkiella parvula HOM05D000001 ORTHO05D004986 5.7e-79 298.1 222 68.5
TWI09G1546 Tripterygium wilfordii HOM05D000001 ORTHO05D004986 5.7e-79 298.1 222 69.8
Carub.0004s0792 Capsella rubella HOM05D000001 ORTHO05D004986 9.7e-79 297.4 222 68.5
PSO675G0445 Papaver somniferum HOM05D000001 ORTHO05D004986 9.7e-79 297.4 227 68.3
Gohir.D09G078500 Gossypium hirsutum HOM05D000001 ORTHO05D004986 1.3e-78 297.0 222 70.7
A03p51120 Brassica napus HOM05D000001 ORTHO05D004986 1.7e-78 296.6 224 68.8
Prupe.4G075900 Prunus persica HOM05D000001 ORTHO05D004986 3.7e-78 295.4 231 65.8
C07p49550 Brassica napus HOM05D000001 ORTHO05D004986 6.3e-78 294.7 221 69.2
DCAR_003945 Daucus carota HOM05D000001 ORTHO05D004986 8.2e-78 294.3 226 66.4
Sed0013949 Sechium edule HOM05D000001 ORTHO05D004986 1.1e-77 293.9 230 67.0
Aa31LG6G920 Aethionema arabicum HOM05D000001 ORTHO05D004986 1.4e-77 293.5 222 65.8
BcaNung00022 Brassica carinata HOM05D000001 ORTHO05D004986 1.4e-77 293.5 220 67.7
MD10G1265600 Malus domestica HOM05D000001 ORTHO05D004986 2.4e-77 292.7 233 64.8
BolC7t45459H Brassica oleracea HOM05D000001 ORTHO05D004986 5.3e-77 291.6 221 67.4
FAN12G3749 Fragaria x ananassa HOM05D000001 ORTHO05D004986 5.3e-77 291.6 239 64.9
BolC1t01175H Brassica oleracea HOM05D000001 ORTHO05D004986 9.1e-77 290.8 220 66.4
FAN12G0199 Fragaria x ananassa HOM05D000001 ORTHO05D004986 9.1e-77 290.8 239 64.9
BcaC09g51544 Brassica carinata HOM05D000001 ORTHO05D004986 1.2e-76 290.4 220 66.4
C01p12010 Brassica napus HOM05D000001 ORTHO05D004986 1.2e-76 290.4 220 66.4
DCAR_007902 Daucus carota HOM05D000001 ORTHO05D004986 1.2e-76 290.4 228 66.7
ECA232G3011 Erigeron canadensis HOM05D000001 ORTHO05D000003 1.2e-76 290.4 224 67.4
BraA03t14197Z Brassica rapa HOM05D000001 ORTHO05D004986 1.6e-76 290.0 225 66.2
BcaNung05675 Brassica carinata HOM05D000001 ORTHO05D004986 4.5e-76 288.5 223 67.7
EL10Ac8g19918 Beta vulgaris HOM05D000001 ORTHO05D004986 1.0e-75 287.3 216 68.5
BraA01t00965Z Brassica rapa HOM05D000001 ORTHO05D004986 1.0e-75 287.3 220 65.0
Nitab4.5_0000982g0180 Nicotiana tabacum HOM05D000001 ORTHO05D004986 1.3e-75 287.0 224 67.0
Duzib192G0828 Durio zibethinus HOM05D000001 ORTHO05D004986 2.2e-75 286.2 277 57.8
PSO782G3580 Papaver somniferum HOM05D000001 ORTHO05D004986 2.2e-75 286.2 233 64.8
HPP92_001019 Vanilla planifolia HOM05D000001 ORTHO05D004986 6.5e-75 284.6 221 64.3
Hund08913 Selenicereus undatus HOM05D000001 ORTHO05D004986 4.2e-74 282.0 309 52.1
A01p10190 Brassica napus HOM05D000001 ORTHO05D004986 5.5e-74 281.6 208 67.3
ATR0598G080 Amborella trichopoda HOM05D000001 ORTHO05D004986 7.2e-74 281.2 222 66.2
Lj2g0013388 Lotus japonicus HOM05D000001 ORTHO05D004986 7.2e-74 281.2 235 64.3
Lj1A1183G70 Lonicera japonica HOM05D000001 ORTHO05D004986 6.1e-73 278.1 221 67.9
Zm00001eb138940 Zea mays HOM05D000001 ORTHO05D004986 2.0e-71 273.1 217 64.1
arahy.Tifrunner.gnm1.ann1.KEGW9P Arachis hypogaea HOM05D000001 ORTHO05D004986 3.4e-71 272.3 220 66.4
arahy.Tifrunner.gnm1.ann1.RU8LWF Arachis hypogaea HOM05D000001 ORTHO05D004986 4.4e-71 271.9 220 66.4
Ca_08155_v3 Cicer arietinum L. HOM05D000001 ORTHO05D004986 5.4e-69 265.0 217 65.9
Actinidia19506 Actinidia chinensis HOM05D000001 ORTHO05D004986 5.9e-68 261.5 175 74.9
Lalb_Chr22g0354091 Lupinus albus HOM05D000001 ORTHO05D004986 1.7e-67 260.0 175 75.4
Thecc.06G155100 Theobroma cacao HOM05D000001 ORTHO05D004986 2.9e-67 259.2 220 63.6
Zm00001eb405440 Zea mays HOM05D000001 ORTHO05D004986 5.0e-67 258.5 203 64.0
Peaxi162Scf00242g00511 Petunia axillaris HOM05D000001 ORTHO05D004986 1.5e-63 246.9 222 60.8
FAN25G0129 Fragaria x ananassa HOM05D000001 ORTHO05D004986 2.6e-63 246.1 169 71.6
Sc05g0008440 Simmondsia chinensis HOM05D000001 ORTHO05D004986 5.7e-63 245.0 221 62.0
Hund23532 Selenicereus undatus HOM05D000001 ORTHO05D004986 7.5e-63 244.6 234 60.7
Atru.chr10.1362 Acer truncatum HOM05D000001 ORTHO05D004986 3.9e-59 232.3 220 57.3
Pp3c16_16970 Physcomitrium patens HOM05D000001 ORTHO05D004986 5.0e-59 231.9 231 53.7
SMO111G0079 Selaginella moellendorffii HOM05D000001 ORTHO05D004986 4.7e-57 225.3 181 58.6
AagrBONN_evm.TU.Sc2ySwM_344.5328 Anthoceros agrestis HOM05D000001 ORTHO05D004986 8.0e-57 224.6 232 51.7
CAN.G157.25 Capsicum annuum HOM05D000001 ORTHO05D004986 8.0e-57 224.6 166 70.5
Eucgr.G01712 Eucalyptus grandis HOM05D000001 ORTHO05D004986 8.9e-56 221.1 172 67.4
FAN07G0177 Fragaria x ananassa HOM05D000001 ORTHO05D009595 9.8e-55 217.6 212 55.2
Mapoly0083s0035 Marchantia polymorpha HOM05D000001 ORTHO05D004986 2.2e-54 216.5 229 52.0
Nitab4.5_0004171g0030 Nicotiana tabacum HOM05D000001 ORTHO05D004986 1.1e-53 214.2 117 87.2
AUR62012587 Chenopodium quinoa HOM05D000001 ORTHO05D004986 4.1e-53 212.2 165 66.7
Psat2g137640 Pisum sativum HOM05D000001 ORTHO05D004986 5.4e-53 211.8 127 80.3
PSO675G6216 Papaver somniferum HOM05D000001 ORTHO05D004986 2.0e-52 209.9 150 70.7
FvH4_4g17080 Fragaria vesca HOM05D000001 ORTHO05D004986 2.7e-52 209.5 175 64.6
ClCG10G001450 Citrullus lanatus HOM05D000001 ORTHO05D004986 4.6e-52 208.8 126 80.2
CBR_g20308 Chara braunii HOM05D000001 ORTHO05D004986 3.3e-50 202.6 250 46.4
SEGI_41604 Sequoiadendron giganteum HOM05D000001 ORTHO05D004986 3.4e-47 192.6 120 74.2
SGA_v2.0_scaffold44G16546 Striga asiatica HOM05D000001 ORTHO05D004986 2.9e-46 189.5 223 50.7
Cre16.g669950 Chlamydomonas reinhardtii HOM05D000001 ORTHO05D004986 3.2e-45 186.0 227 48.5
BcaNung05673 Brassica carinata HOM05D000001 ORTHO05D004986 1.7e-43 180.3 104 80.8
Nn6g33671 Nelumbo nucifera HOM05D000001 ORTHO05D004986 1.2e-41 174.1 183 53.6
MELO3C013839.2 Cucumis melo HOM05D000001 ORTHO05D004986 2.6e-39 166.4 299 37.8
Potri.002G170700 Populus trichocarpa HOM05D000001 ORTHO05D004986 9.9e-39 164.5 195 50.8
MCO07G420 Micromonas commoda HOM05D000001 ORTHO05D004986 1.7e-35 153.7 187 46.5
FAN22G1785 Fragaria x ananassa HOM05D000001 ORTHO05D009595 4.4e-31 139.0 184 45.1
FAN17G2209 Fragaria x ananassa HOM05D000001 ORTHO05D004986 2.1e-28 130.2 129 57.4
RcHm_v2.0_Chr7g0219921 Rosa chinensis HOM05D005182 ORTHO05D006631 1.7e-27 127.1 81 75.3
Atru.chr10.1359 Acer truncatum HOM05D000001 ORTHO05D004986 3.1e-24 116.3 86 67.4
CDE04G2877 Ceratophyllum demersum HOM05D000001 ORTHO05D004986 1.5e-23 114.0 166 44.0
MD05G1092100 Malus domestica HOM05D000001 ORTHO05D004986 4.4e-23 112.5 75 70.7
Sabra01G0122300 Salix brachista HOM05D000001 ORTHO05D004986 4.4e-23 112.5 98 59.2
Glyma.01G062700 Glycine max HOM05D000001 ORTHO05D004986 1.7e-22 110.5 92 66.3
CAN.G45.3 Capsicum annuum HOM05D000001 ORTHO05D004986 1.4e-21 107.5 67 83.6
Glyma.17G172800 Glycine max HOM05D000001 ORTHO05D004986 5.4e-21 105.5 92 63.0
MD10G1065300 Malus domestica HOM05D000001 ORTHO05D004986 1.2e-20 104.4 173 38.2
arahy.Tifrunner.gnm1.ann1.T5CDEI Arachis hypogaea HOM05D000001 ORTHO05D005257 1.0e-19 101.3 178 38.2
arahy.Tifrunner.gnm1.ann1.WQ0UR5 Arachis hypogaea HOM05D000001 ORTHO05D083426 2.5e-18 96.7 137 43.1
A08p13600 Brassica napus HOM05D000001 ORTHO05D004986 4.3e-18 95.9 92 57.6
Os03g0423200 Oryza sativa ssp. japonica HOM05D000001 ORTHO05D004986 1.6e-17 94.0 59 78.0
Ciclev10013445m.g Citrus clementina HOM05D000001 ORTHO05D004986 2.1e-17 93.6 72 65.3
Cfa022018 Carpinus fangiana HOM05D000001 ORTHO05D004986 2.0e-15 87.0 201 34.3
ClCG10G001440 Citrullus lanatus HOM05D000001 ORTHO05D004986 3.4e-15 86.3 91 53.8
SEGI_40748 Sequoiadendron giganteum HOM05D000001 ORTHO05D004986 3.8e-14 82.8 97 52.6
Glyma.08G299100 Glycine max HOM05D000001 ORTHO05D002756 1.9e-13 80.5 72 62.5
arahy.Tifrunner.gnm1.ann1.9TS7X7 Arachis hypogaea HOM05D000025 ORTHO05D000040 4.6e-12 75.9 46 78.3
Medtr5g029710 Medicago truncatula HOM05D000001 ORTHO05D004986 3.0e-11 73.2 55 65.5
arahy.Tifrunner.gnm1.ann1.A1RXRR Arachis hypogaea HOM05D000001 ORTHO05D004986 7.4e-10 68.6 51 66.7
BolC8t48554H Brassica oleracea HOM05D000001 ORTHO05D004986 6.2e-09 65.5 52 65.4
arahy.Tifrunner.gnm1.ann1.X21LXD Arachis hypogaea HOM05D000001 ORTHO05D085495 4.9e-06 55.8 122 36.9
Nitab4.5_0000001g0510 Nicotiana tabacum HOM05D000001 ORTHO05D004986 6.4e-06 55.5 34 61.8


User provided reference genes

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