Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040900.1 Olea europaea HOM05D006792 ORTHO05D008489 2.2e-83 312.4 171 100.0
MSTRG.1327 Avicennia marina HOM05D006792 ORTHO05D008489 7.6e-52 207.6 148 68.9
Dinv35992 Davidia involucrata HOM05D006792 ORTHO05D008489 2.2e-51 206.1 155 65.8
Thecc.08G014600 Theobroma cacao HOM05D006792 ORTHO05D008489 5.4e-50 201.4 156 64.1
Actinidia15267 Actinidia chinensis HOM05D006792 ORTHO05D008489 4.6e-49 198.4 145 64.8
Cfa018502 Carpinus fangiana HOM05D006792 ORTHO05D008489 6.0e-49 198.0 149 64.4
CSS0036769 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 1.0e-48 197.2 157 60.5
Haze_17574 Corylus avellana HOM05D006792 ORTHO05D008489 3.0e-48 195.7 156 61.5
CSS0036679 Camellia sinensis var. sinensis HOM05D006792 ORTHO05D008489 3.9e-48 195.3 157 59.9
Gohir.A06G015700 Gossypium hirsutum HOM05D006792 ORTHO05D008489 6.6e-48 194.5 153 63.4
Duzib041G0477 Durio zibethinus HOM05D006792 ORTHO05D008489 8.6e-48 194.1 156 62.8
TAR381G0050 Trochodendron aralioides HOM05D006792 ORTHO05D008489 8.6e-48 194.1 153 61.4
TAR625G1025 Trochodendron aralioides HOM05D006792 ORTHO05D008489 3.3e-47 192.2 158 60.1
Nn5g30170 Nelumbo nucifera HOM05D006792 ORTHO05D008489 7.3e-47 191.0 159 60.4
Gorai.010G016600 Gossypium raimondii HOM05D006792 ORTHO05D008489 9.6e-47 190.7 147 64.6
ClCG08G015590 Citrullus lanatus HOM05D006792 ORTHO05D008489 1.6e-46 189.9 156 61.5
Gohir.D06G013900 Gossypium hirsutum HOM05D006792 ORTHO05D008489 2.1e-46 189.5 153 62.1
GSVIVG01009569001 Vitis vinifera HOM05D006792 ORTHO05D008489 4.7e-46 188.3 143 64.3
Cpa.g.sc376.3 Carica papaya HOM05D006792 ORTHO05D008489 6.2e-46 188.0 156 59.0
MELO3C010894.2 Cucumis melo HOM05D006792 ORTHO05D008489 8.1e-46 187.6 154 61.0
Lj4A777T61 Lonicera japonica HOM05D006792 ORTHO05D008489 1.1e-45 187.2 150 62.7
QL02p006151 Quercus lobata HOM05D006792 ORTHO05D008489 1.1e-45 187.2 156 57.1
Manes.10G083100 Manihot esculenta HOM05D006792 ORTHO05D008489 1.8e-45 186.4 156 60.3
CANSAT56G4245 Cannabis sativa HOM05D006792 ORTHO05D008489 2.4e-45 186.0 158 60.1
CiPaw.15G064100 Carya illinoinensis HOM05D006792 ORTHO05D008489 3.1e-45 185.7 155 58.7
SGA_v2.0_scaffold217G42431 Striga asiatica HOM05D006792 ORTHO05D008489 3.1e-45 185.7 152 59.9
CsaV3_2G028180 Cucumis sativus L. HOM05D006792 ORTHO05D008489 6.8e-45 184.5 154 59.1
Atru.chr13.615 Acer truncatum HOM05D006792 ORTHO05D008489 2.6e-44 182.6 149 61.7
Migut.C00611 Erythranthe guttata HOM05D006792 ORTHO05D008489 2.6e-44 182.6 156 58.3
Potri.014G035300 Populus trichocarpa HOM05D006792 ORTHO05D008489 4.4e-44 181.8 156 55.8
Cc10_g03850 Coffea canephora HOM05D006792 ORTHO05D008489 7.6e-44 181.0 155 61.9
Sed0017537 Sechium edule HOM05D006792 ORTHO05D008489 7.6e-44 181.0 161 59.0
vmacro21565 Vaccinium macrocarpon HOM05D006792 ORTHO05D008489 1.7e-43 179.9 158 58.9
PGSC0003DMG400014433 Solanum tuberosum HOM05D006792 ORTHO05D008489 2.2e-43 179.5 153 60.8
CAN.G1110.13 Capsicum annuum HOM05D006792 ORTHO05D008489 3.8e-43 178.7 156 60.3
Rhsim06G0045800 Rhododendron simsii HOM05D006792 ORTHO05D008489 3.8e-43 178.7 159 59.1
RcHm_v2.0_Chr6g0299831 Rosa chinensis HOM05D006792 ORTHO05D008489 3.8e-43 178.7 152 57.2
Sabra14G0025200 Salix brachista HOM05D006792 ORTHO05D008489 4.9e-43 178.3 156 55.1
SGA_v2.0_scaffold127G34009 Striga asiatica HOM05D006792 ORTHO05D008489 4.9e-43 178.3 152 58.6
TWI36G0635 Tripterygium wilfordii HOM05D006792 ORTHO05D008489 4.9e-43 178.3 155 58.7
FAN15G1697 Fragaria x ananassa HOM05D006792 ORTHO05D008489 1.9e-42 176.4 156 55.8
Eucgr.L00645 Eucalyptus grandis HOM05D006792 ORTHO05D008489 2.4e-42 176.0 156 56.4
FvH4_2g40760 Fragaria vesca HOM05D006792 ORTHO05D008489 3.2e-42 175.6 157 55.4
MD15G1036100 Malus domestica HOM05D006792 ORTHO05D008489 3.2e-42 175.6 148 57.4
Prupe.1G390300 Prunus persica HOM05D006792 ORTHO05D008489 4.2e-42 175.3 157 57.3
Solyc10g006520.3 Solanum lycopersicum HOM05D006792 ORTHO05D008489 4.2e-42 175.3 155 59.4
Sopen10g002470 Solanum pennellii HOM05D006792 ORTHO05D008489 4.2e-42 175.3 155 59.4
Aqoxy5G01393 Aquilegia oxysepala HOM05D006792 ORTHO05D008489 1.6e-41 173.3 166 54.2
Ciclev10002498m.g Citrus clementina HOM05D006792 ORTHO05D008489 1.6e-41 173.3 156 56.4
Hund23634 Selenicereus undatus HOM05D006792 ORTHO05D008489 1.6e-41 173.3 169 54.4
Nitab4.5_0000074g0180 Nicotiana tabacum HOM05D006792 ORTHO05D008489 2.1e-41 172.9 155 58.7
Peaxi162Scf00324g00610 Petunia axillaris HOM05D006792 ORTHO05D008489 2.1e-41 172.9 155 58.1
HanXRQChr09g0268121 Helianthus annuus HOM05D006792 ORTHO05D008489 4.6e-41 171.8 139 61.9
FAN27G1218 Fragaria x ananassa HOM05D006792 ORTHO05D008489 7.8e-41 171.0 155 54.8
Nitab4.5_0009129g0010 Nicotiana tabacum HOM05D006792 ORTHO05D008489 3.9e-40 168.7 155 57.4
PGR031G1590 Punica granatum HOM05D006792 ORTHO05D008489 3.9e-40 168.7 148 54.1
PSO170G4587 Papaver somniferum HOM05D006792 ORTHO05D008489 5.1e-40 168.3 157 54.1
Aa31LG5G9340 Aethionema arabicum HOM05D006792 ORTHO05D008489 6.6e-40 167.9 145 57.2
Carub.0006s0578 Capsella rubella HOM05D006792 ORTHO05D008489 8.7e-40 167.5 141 58.2
Sp6g36430 Schrenkiella parvula HOM05D006792 ORTHO05D008489 1.5e-39 166.8 140 57.9
THA.LOC104803789 Tarenaya hassleriana HOM05D006792 ORTHO05D008489 2.5e-39 166.0 155 52.3
Lalb_Chr06g0172721 Lupinus albus HOM05D006792 ORTHO05D008489 3.3e-39 165.6 162 54.3
Carub.0006s0531 Capsella rubella HOM05D006792 ORTHO05D008489 4.3e-39 165.2 141 56.7
BolC9t59782H Brassica oleracea HOM05D006792 ORTHO05D008489 7.3e-39 164.5 142 57.7
Thhalv10014748m.g Eutrema salsugineum HOM05D006792 ORTHO05D008489 9.6e-39 164.1 142 57.0
Lsat_1_v5_gn_4_124401 Lactuca sativa HOM05D006792 ORTHO05D008489 9.6e-39 164.1 142 57.7
PGR031G1503 Punica granatum HOM05D006792 ORTHO05D008489 1.3e-38 163.7 148 53.4
Sc02g0006830 Simmondsia chinensis HOM05D006792 ORTHO05D008489 1.6e-38 163.3 157 56.1
BcaC06g32375 Brassica carinata HOM05D006792 ORTHO05D008489 2.1e-38 162.9 142 57.0
C09p70370 Brassica napus HOM05D006792 ORTHO05D008489 2.1e-38 162.9 142 57.0
A10p29960 Brassica napus HOM05D006792 ORTHO05D008489 4.8e-38 161.8 140 57.1
AT5G06430 Arabidopsis thaliana HOM05D006792 ORTHO05D008489 1.1e-37 160.6 142 56.3
BraA10t45035Z Brassica rapa HOM05D006792 ORTHO05D008489 1.1e-37 160.6 140 56.4
AL6G16520 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 1.4e-37 160.2 141 54.6
AL6G16990 Arabidopsis lyrata HOM05D006792 ORTHO05D008489 2.4e-37 159.5 141 54.6
CDE07G1453 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 2.4e-37 159.5 146 56.2
EL10Ac3g05711 Beta vulgaris HOM05D006792 ORTHO05D008489 4.0e-37 158.7 167 52.7
BcaC06g32576 Brassica carinata HOM05D006792 ORTHO05D008489 6.9e-37 157.9 138 60.1
AUR62021223 Chenopodium quinoa HOM05D006792 ORTHO05D008489 6.9e-37 157.9 176 51.7
AUR62016018 Chenopodium quinoa HOM05D006792 ORTHO05D008489 9.0e-37 157.5 173 50.9
TPR.G28895 Trifolium pratense HOM05D006792 ORTHO05D008489 9.0e-37 157.5 159 52.2
arahy.Tifrunner.gnm1.ann1.LP5K48 Arachis hypogaea HOM05D006792 ORTHO05D008489 1.2e-36 157.1 149 54.4
arahy.Tifrunner.gnm1.ann1.LDJ6K5 Arachis hypogaea HOM05D006792 ORTHO05D008489 2.0e-36 156.4 149 54.4
Duzib093G1402 Durio zibethinus HOM05D006792 ORTHO05D008489 2.6e-36 156.0 138 60.9
Eucgr.E03397 Eucalyptus grandis HOM05D006792 ORTHO05D008489 2.6e-36 156.0 143 53.8
Glyma.20G204600 Glycine max HOM05D006792 ORTHO05D008489 2.6e-36 156.0 141 55.3
SalBow1G1949 Salvia bowleyana HOM05D006792 ORTHO05D008489 2.6e-36 156.0 143 53.1
Medtr1g075100 Medicago truncatula HOM05D006792 ORTHO05D008489 3.4e-36 155.6 148 56.8
SalBow6G5080 Salvia bowleyana HOM05D006792 ORTHO05D008489 3.4e-36 155.6 143 53.1
HPP92_009608 Vanilla planifolia HOM05D006792 ORTHO05D008489 3.4e-36 155.6 152 52.6
Psat6g128400 Pisum sativum HOM05D006792 ORTHO05D008489 9.9e-36 154.1 161 54.0
CDE04G1657 Ceratophyllum demersum HOM05D006792 ORTHO05D008489 1.3e-35 153.7 151 51.7
Lj5g0003340 Lotus japonicus HOM05D006792 ORTHO05D008489 1.7e-35 153.3 156 54.5
Ah.07g209080 Amaranthus hybridus HOM05D006792 ORTHO05D008489 2.2e-35 152.9 153 53.6
Phvul.L001959 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 2.9e-35 152.5 139 53.2
VMungo0720G1195 Vigna mungo HOM05D006792 ORTHO05D008489 5.4e-34 148.3 143 53.8
ATR0225G026 Amborella trichopoda HOM05D006792 ORTHO05D008489 1.0e-32 144.1 151 49.7
ECA232G0465 Erigeron canadensis HOM05D006792 ORTHO05D008489 1.0e-32 144.1 137 51.1
DCAR_008785 Daucus carota HOM05D006792 ORTHO05D008489 2.3e-32 142.9 150 50.7
COL.COLO4_26447 Corchorus olitorius HOM05D006792 ORTHO05D008489 3.0e-32 142.5 116 66.4
unitig_19.g30007 Utricularia gibba HOM05D006792 ORTHO05D008489 4.3e-31 138.7 149 49.0
unitig_8.g5015 Utricularia gibba HOM05D006792 ORTHO05D008489 5.6e-31 138.3 148 49.3
CARHR285910 Cardamine hirsuta HOM05D006792 ORTHO05D008489 7.6e-28 127.9 118 55.1
CARHR206180 Cardamine hirsuta HOM05D006792 ORTHO05D008489 1.2e-25 120.6 111 55.0
Ca_09830_v3 Cicer arietinum L. HOM05D002720 ORTHO05D002901 2.3e-24 116.3 92 64.1
Phvul.004G112200 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 1.9e-23 113.2 114 50.9
Zm00001eb167650 Zea mays HOM05D006792 ORTHO05D008489 6.2e-22 108.2 151 45.0
Rhsim06G0045400 Rhododendron simsii HOM05D000500 ORTHO05D000367 6.9e-21 104.8 64 75.0
SMO184G0001 Selaginella moellendorffii HOM05D006792 ORTHO05D008489 5.8e-20 101.7 71 66.2
Glyma.09G029200 Glycine max HOM05D006792 ORTHO05D008489 7.6e-20 101.3 113 49.6
QL03p014147 Quercus lobata HOM05D006792 ORTHO05D008489 1.0e-19 100.9 112 51.8
Pp3c14_7090 Physcomitrium patens HOM05D006792 ORTHO05D008489 3.2e-18 95.9 72 56.9
Os11g0592900 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 2.7e-17 92.8 159 38.4
Mapoly0072s0021 Marchantia polymorpha HOM05D006792 ORTHO05D008489 1.0e-16 90.9 71 59.2
Phvul.008G161700 Phaseolus vulgaris HOM05D006792 ORTHO05D008489 6.7e-16 88.2 59 71.2
Rhsim06G0045200 Rhododendron simsii HOM05D000500 ORTHO05D000367 1.1e-15 87.4 58 74.1
Os11g0597500 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 2.0e-12 76.6 140 37.1
CBR_g61518 Chara braunii HOM05D006792 ORTHO05D008489 1.7e-11 73.6 88 43.2
Os11g0597601 Oryza sativa ssp. japonica HOM05D006792 ORTHO05D008489 1.5e-07 60.5 68 47.1


User provided reference genes

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