Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040885.1 Olea europaea HOM05D007802 ORTHO05D009879 6.7e-39 163.7 91 100.0
Dinv42589 Davidia involucrata HOM05D007802 ORTHO05D009879 1.2e-16 89.7 90 61.1
Manes.18G057100 Manihot esculenta HOM05D007802 ORTHO05D009879 4.6e-16 87.8 96 57.3
TAR628G0546 Trochodendron aralioides HOM05D007802 ORTHO05D009879 3.0e-15 85.1 69 69.6
Cpa.g.sc21.44 Carica papaya HOM05D007802 ORTHO05D009879 5.1e-15 84.3 91 54.9
Nn5g29812 Nelumbo nucifera HOM05D007802 ORTHO05D009879 5.1e-15 84.3 89 53.9
Cfa013816 Carpinus fangiana HOM05D007802 ORTHO05D009879 6.7e-15 84.0 74 66.2
QL09p018673 Quercus lobata HOM05D007802 ORTHO05D009879 6.7e-15 84.0 82 62.2
Haze_22490 Corylus avellana HOM05D007802 ORTHO05D009879 1.1e-14 83.2 87 60.9
TWI56G1155 Tripterygium wilfordii HOM05D007802 ORTHO05D009879 1.9e-14 82.4 74 66.2
Ciclev10002961m.g Citrus clementina HOM05D007802 ORTHO05D009879 7.4e-14 80.5 90 54.4
Sabra02G0086800 Salix brachista HOM05D007802 ORTHO05D009879 9.7e-14 80.1 69 63.8
MBI16_g07278_MAGBIO Magnolia biondii HOM05D007802 ORTHO05D009879 2.2e-13 79.0 73 61.6
FvH4_5g34160 Fragaria vesca HOM05D007802 ORTHO05D009879 3.7e-13 78.2 78 56.4
GSVIVG01009214001 Vitis vinifera HOM05D007802 ORTHO05D009879 3.7e-13 78.2 76 59.2
CSS0046125 Camellia sinensis var. sinensis HOM05D007802 ORTHO05D009879 4.8e-13 77.8 68 66.2
Cc10_g08360 Coffea canephora HOM05D007802 ORTHO05D009879 4.8e-13 77.8 88 54.5
Eucgr.F00437 Eucalyptus grandis HOM05D007802 ORTHO05D009879 6.3e-13 77.4 62 67.7
TPR.G38823 Trifolium pratense HOM05D007802 ORTHO05D009879 6.3e-13 77.4 71 63.4
MD08G1204900 Malus domestica HOM05D007802 ORTHO05D009879 8.2e-13 77.0 66 66.7
Glyma.02G216200 Glycine max HOM05D007802 ORTHO05D009879 1.1e-12 76.6 81 53.1
RcHm_v2.0_Chr7g0233751 Rosa chinensis HOM05D007802 ORTHO05D009879 1.1e-12 76.6 77 55.8
C07p40270 Brassica napus HOM05D007802 ORTHO05D009879 1.4e-12 76.3 74 59.5
BolC7t44562H Brassica oleracea HOM05D007802 ORTHO05D009879 1.8e-12 75.9 74 59.5
CARHR133150 Cardamine hirsuta HOM05D007802 ORTHO05D009879 1.8e-12 75.9 66 65.2
Prupe.1G536500 Prunus persica HOM05D007802 ORTHO05D009879 1.8e-12 75.9 89 55.1
MD08G1204300 Malus domestica HOM05D007802 ORTHO05D009879 2.4e-12 75.5 66 63.6
Psat2g064360 Pisum sativum HOM05D007802 ORTHO05D009879 2.4e-12 75.5 86 53.5
BcaB02g09173 Brassica carinata HOM05D007802 ORTHO05D009879 3.1e-12 75.1 68 63.2
Thhalv10017501m.g Eutrema salsugineum HOM05D007802 ORTHO05D009879 4.1e-12 74.7 66 62.1
Atru.chr13.972 Acer truncatum HOM05D007802 ORTHO05D009879 5.3e-12 74.3 69 62.3
Ca_05474_v3 Cicer arietinum L. HOM05D007802 ORTHO05D009879 5.3e-12 74.3 81 53.1
AL4G35740 Arabidopsis lyrata HOM05D007802 ORTHO05D009879 6.9e-12 73.9 74 58.1
THA.LOC104806901 Tarenaya hassleriana HOM05D007802 ORTHO05D009879 6.9e-12 73.9 69 62.3
AT2G38465 Arabidopsis thaliana HOM05D007802 ORTHO05D009879 9.1e-12 73.6 74 58.1
ClCG08G011540 Citrullus lanatus HOM05D007802 ORTHO05D009879 9.1e-12 73.6 70 60.0
Medtr5g066760 Medicago truncatula HOM05D007802 ORTHO05D009879 9.1e-12 73.6 81 54.3
BcaC02g11998 Brassica carinata HOM05D007802 ORTHO05D009879 1.2e-11 73.2 76 56.6
BcaNung02098 Brassica carinata HOM05D007802 ORTHO05D009879 1.2e-11 73.2 74 58.1
BolC4t22496H Brassica oleracea HOM05D007802 ORTHO05D009879 1.2e-11 73.2 76 56.6
BraA05t19725Z Brassica rapa HOM05D007802 ORTHO05D009879 1.5e-11 72.8 76 56.6
A05p07580 Brassica napus HOM05D007802 ORTHO05D009879 2.6e-11 72.0 76 56.6
C04p09060 Brassica napus HOM05D007802 ORTHO05D009879 2.6e-11 72.0 76 55.3
A04p29410 Brassica napus HOM05D007802 ORTHO05D009879 3.4e-11 71.6 66 62.1
Carub.0004s2044 Capsella rubella HOM05D007802 ORTHO05D009879 3.4e-11 71.6 76 56.6
Sed0007651 Sechium edule HOM05D007802 ORTHO05D009879 4.5e-11 71.2 83 53.0
FvH4_4g29130 Fragaria vesca HOM05D007802 ORTHO05D009879 5.9e-11 70.9 74 56.8
FAN12G4209 Fragaria x ananassa HOM05D007802 ORTHO05D009879 5.9e-11 70.9 74 56.8
Thecc.08G074100 Theobroma cacao HOM05D007802 ORTHO05D009879 5.9e-11 70.9 66 60.6
arahy.Tifrunner.gnm1.ann1.6VNW8E Arachis hypogaea HOM05D007802 ORTHO05D009879 7.7e-11 70.5 90 47.8
CiPaw.08G057300 Carya illinoinensis HOM05D007802 ORTHO05D009879 1.0e-10 70.1 70 58.6
Gorai.009G227900 Gossypium raimondii HOM05D007802 ORTHO05D009879 2.2e-10 68.9 92 50.0
MELO3C011071.2 Cucumis melo HOM05D007802 ORTHO05D009879 2.9e-10 68.6 82 51.2
Gohir.D05G220800 Gossypium hirsutum HOM05D007802 ORTHO05D009879 2.9e-10 68.6 92 50.0
Lalb_Chr17g0344631 Lupinus albus HOM05D007802 ORTHO05D009879 3.8e-10 68.2 81 48.1
Gohir.A05G216600 Gossypium hirsutum HOM05D007802 ORTHO05D009879 6.5e-10 67.4 91 51.6
Phvul.008G183400 Phaseolus vulgaris HOM05D007802 ORTHO05D009879 6.5e-10 67.4 71 54.9
ATR0767G120 Amborella trichopoda HOM05D007802 ORTHO05D009879 1.1e-09 66.6 71 54.9
BcaB06g29053 Brassica carinata HOM05D007802 ORTHO05D009879 1.1e-09 66.6 66 54.5
PGR042G2061 Punica granatum HOM05D007802 ORTHO05D009879 1.4e-09 66.2 87 49.4
COL.COLO4_35287 Corchorus olitorius HOM05D007802 ORTHO05D009879 1.9e-09 65.9 83 45.8
FAN07G2104 Fragaria x ananassa HOM05D007802 ORTHO05D009879 1.9e-09 65.9 69 53.6
Nitab4.5_0003852g0060 Nicotiana tabacum HOM05D007802 ORTHO05D009879 3.2e-09 65.1 66 56.1
Rhsim07G0213800 Rhododendron simsii HOM05D007802 ORTHO05D009879 3.2e-09 65.1 88 50.0
FAN08G3003 Fragaria x ananassa HOM05D007802 ORTHO05D009879 4.2e-09 64.7 107 42.1
FAN18G1081 Fragaria x ananassa HOM05D007802 ORTHO05D009879 4.2e-09 64.7 107 42.1
Nitab4.5_0001601g0070 Nicotiana tabacum HOM05D007802 ORTHO05D009879 4.2e-09 64.7 66 56.1
AUR62014370 Chenopodium quinoa HOM05D007802 ORTHO05D009879 5.5e-09 64.3 65 56.9
AUR62019113 Chenopodium quinoa HOM05D007802 ORTHO05D009879 1.2e-08 63.2 72 51.4
SalBow7G0598 Salvia bowleyana HOM05D007802 ORTHO05D009879 1.2e-08 63.2 69 52.2
Aa31LG1G14150 Aethionema arabicum HOM05D007802 ORTHO05D009879 2.7e-08 62.0 78 48.7
Solyc08g016415.1 Solanum lycopersicum HOM05D007802 ORTHO05D009879 2.7e-08 62.0 66 56.1
Sopen08g006790 Solanum pennellii HOM05D007802 ORTHO05D009879 2.7e-08 62.0 67 55.2
CANSAT78G0113 Cannabis sativa HOM05D007802 ORTHO05D009879 4.7e-08 61.2 62 56.5
Sp4g20790 Schrenkiella parvula HOM05D007802 ORTHO05D009879 6.1e-08 60.8 74 54.1
DCAR_019323 Daucus carota HOM05D007802 ORTHO05D009879 7.9e-08 60.5 89 43.8
HPP92_025782 Vanilla planifolia HOM05D007802 ORTHO05D009879 1.4e-07 59.7 69 52.2
Os06g0651200 Oryza sativa ssp. japonica HOM05D007802 ORTHO05D009879 8.8e-07 57.0 72 44.4
Aqoxy6G00664 Aquilegia oxysepala HOM05D007802 ORTHO05D009879 2.0e-06 55.8 107 37.4
arahy.Tifrunner.gnm1.ann1.J1FBU0 Arachis hypogaea HOM05D007802 ORTHO05D009879 2.0e-06 55.8 80 43.8
SEGI_04889 Sequoiadendron giganteum HOM05D007802 ORTHO05D009879 2.6e-06 55.5 78 42.3
SEGI_40405 Sequoiadendron giganteum HOM05D007802 ORTHO05D009879 9.7e-06 53.5 69 44.9


User provided reference genes

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