Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 1.3e-97 359.8 192 100.0
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 7.7e-53 211.1 195 66.7
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 1.8e-46 189.9 170 59.4
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.5e-45 186.8 167 58.1
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 3.4e-45 185.7 170 60.0
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.3e-44 183.7 167 58.7
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 1.7e-44 183.3 170 60.0
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 5.0e-44 181.8 171 59.1
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 6.5e-44 181.4 170 58.8
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 1.1e-43 180.6 161 60.2
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 1.9e-43 179.9 168 57.1
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.5e-43 179.5 167 56.3
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 3.2e-43 179.1 169 55.6
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 4.2e-43 178.7 172 56.4
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 5.5e-43 178.3 169 55.0
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 5.5e-43 178.3 168 56.5
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 9.4e-43 177.6 171 55.6
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 1.2e-42 177.2 159 60.4
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 2.1e-42 176.4 167 55.7
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 2.1e-42 176.4 168 57.1
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 2.1e-42 176.4 168 57.7
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.1e-42 176.4 167 55.1
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 2.7e-42 176.0 161 58.4
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.7e-42 176.0 167 56.3
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 3.6e-42 175.6 189 57.1
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 4.7e-42 175.3 167 57.5
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 4.7e-42 175.3 168 56.5
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 6.1e-42 174.9 167 55.7
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 6.1e-42 174.9 160 58.8
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 6.1e-42 174.9 168 56.0
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 1.0e-41 174.1 170 54.1
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 1.0e-41 174.1 167 55.7
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 1.4e-41 173.7 167 56.3
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 1.8e-41 173.3 166 55.4
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 1.8e-41 173.3 166 55.4
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 2.3e-41 172.9 168 55.4
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 5.2e-41 171.8 170 54.7
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 5.2e-41 171.8 170 54.7
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 5.2e-41 171.8 172 54.7
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 5.2e-41 171.8 168 54.2
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 8.8e-41 171.0 174 54.6
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 3.3e-40 169.1 170 54.1
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 4.4e-40 168.7 170 53.5
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 5.7e-40 168.3 168 54.2
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 7.4e-40 167.9 168 53.6
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 9.7e-40 167.5 170 53.5
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 1.3e-39 167.2 170 54.1
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.3e-39 167.2 167 54.5
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 1.7e-39 166.8 160 55.6
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.2e-39 166.4 168 53.0
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 4.8e-39 165.2 170 52.4
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 4.8e-39 165.2 162 53.7
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 4.8e-39 165.2 162 53.7
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 6.3e-39 164.9 161 54.7
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.8e-38 163.3 171 52.6
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 4.1e-38 162.2 162 52.5
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 1.6e-37 160.2 161 54.0
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 5.9e-37 158.3 160 53.1
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 2.2e-36 156.4 165 52.7
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 3.8e-36 155.6 165 49.7
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 3.8e-36 155.6 172 51.7
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 5.0e-36 155.2 168 50.0
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 5.0e-36 155.2 169 50.9
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 6.5e-36 154.8 171 49.7
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 1.5e-35 153.7 170 51.2
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 7.2e-35 151.4 143 56.6
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 1.6e-34 150.2 164 50.6
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 2.1e-34 149.8 148 54.7
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 4.7e-34 148.7 167 50.3
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 6.1e-34 148.3 162 50.0
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 2.3e-33 146.4 161 49.1
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 2.3e-33 146.4 161 51.6
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 3.0e-33 146.0 167 47.9
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 3.0e-33 146.0 163 50.3
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 5.2e-33 145.2 172 49.4
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 5.2e-33 145.2 172 49.4
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 5.2e-33 145.2 172 49.4
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 5.2e-33 145.2 172 49.4
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 8.8e-33 144.4 172 49.4
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 1.5e-32 143.7 173 48.0
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 2.0e-32 143.3 161 49.1
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 2.0e-32 143.3 169 48.5
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 2.6e-32 142.9 161 49.7
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 2.6e-32 142.9 172 47.7
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 3.3e-32 142.5 173 49.1
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 4.4e-32 142.1 172 47.7
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 7.5e-32 141.4 173 47.4
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 9.7e-32 141.0 172 45.9
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 9.7e-32 141.0 172 47.1
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 9.7e-32 141.0 171 45.6
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 9.7e-32 141.0 161 49.7
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 1.3e-31 140.6 152 50.0
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.3e-31 140.6 161 49.1
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 2.8e-31 139.4 161 49.7
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 3.7e-31 139.0 168 47.6
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 4.8e-31 138.7 168 47.6
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 4.8e-31 138.7 160 50.0
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 6.3e-31 138.3 162 45.7
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 8.2e-31 137.9 145 51.0
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 1.1e-30 137.5 160 49.4
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.1e-30 137.5 171 43.9
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 3.1e-30 136.0 154 49.4
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 3.1e-30 136.0 145 49.7
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 2.0e-29 133.3 147 50.3
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 2.0e-29 133.3 147 50.3
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 2.7e-29 132.9 173 45.1
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 3.5e-29 132.5 149 50.3
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 5.9e-29 131.7 161 47.2
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 1.7e-28 130.2 163 44.2
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 1.7e-28 130.2 161 46.6
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 5.0e-28 128.6 141 49.6
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 2.5e-27 126.3 155 46.5
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 9.8e-24 114.4 185 45.4
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 1.1e-22 110.9 61 80.3
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.1e-22 110.9 130 48.5
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 2.7e-21 106.3 127 47.2
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 1.5e-19 100.5 61 73.8
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 3.3e-19 99.4 144 40.3
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 7.2e-19 98.2 61 70.5
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.8e-17 93.6 121 44.6
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 4.0e-17 92.4 82 57.3
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 4.0e-17 92.4 140 35.7
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 9.8e-16 87.8 70 65.7
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.7e-15 87.0 66 65.2
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 2.2e-15 86.7 140 38.6
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 2.8e-15 86.3 61 62.3
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 7.0e-14 81.6 57 64.9
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 1.2e-13 80.9 144 34.0
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 2.0e-13 80.1 86 64.0
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 2.7e-13 79.7 61 63.9
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 1.0e-12 77.8 70 60.0
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 2.3e-12 76.6 141 36.2
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 5.6e-11 72.0 49 67.3
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.1e-10 70.1 50 58.0
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 6.1e-10 68.6 59 62.7


User provided reference genes

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