Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040617.1 Olea europaea HOM05D008016 ORTHO05D004271 8.1e-48 193.4 94 100.0
FAN22G1916 Fragaria x ananassa HOM05D008037 ORTHO05D004271 2.4e-31 138.7 71 91.5
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 4.2e-28 127.9 67 92.5
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 2.7e-27 125.2 72 86.1
RcHm_v2.0_Chr2g0095251 Rosa chinensis HOM05D008016 ORTHO05D004271 2.3e-26 122.1 64 89.1
COL.COLO4_33462 Corchorus olitorius HOM05D008016 ORTHO05D004271 5.6e-25 117.5 72 84.7
Gohir.D07G151450 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.4e-23 112.8 72 76.4
vmacro22420 Vaccinium macrocarpon HOM05D008016 ORTHO05D010055 2.6e-22 108.6 72 79.2
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 1.7e-21 105.9 60 88.3
vmacro22395 Vaccinium macrocarpon HOM05D008016 ORTHO05D004271 2.9e-21 105.1 55 94.5
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 1.0e-18 96.7 72 70.8
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 2.0e-14 82.4 40 92.5
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 7.7e-14 80.5 45 84.4
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 7.7e-14 80.5 45 84.4
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 7.7e-14 80.5 45 84.4
MD03G1269900 Malus domestica HOM05D008037 ORTHO05D004271 2.2e-13 79.0 53 75.5
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 2.9e-13 78.6 45 82.2
ClCG11G009640 Citrullus lanatus HOM05D008354 ORTHO05D010055 3.8e-13 78.2 39 87.2
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 3.8e-13 78.2 42 90.5
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 6.5e-13 77.4 45 82.2
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 4.2e-12 74.7 49 75.5
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 9.4e-12 73.6 78 52.6
FAN26G0971 Fragaria x ananassa HOM05D008037 ORTHO05D004271 9.4e-12 73.6 37 86.5
C04p22520 Brassica napus HOM05D008016 ORTHO05D004271 1.2e-11 73.2 43 88.4
BolSC29t60497H Brassica oleracea HOM05D008016 ORTHO05D010588 1.2e-11 73.2 43 88.4
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 1.2e-11 73.2 43 88.4
BolSC35t60714H Brassica oleracea HOM05D008016 ORTHO05D004271 1.2e-11 73.2 43 88.4
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 1.2e-11 73.2 43 88.4
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 1.2e-11 73.2 43 88.4
BolSC49t61153H Brassica oleracea HOM05D008016 ORTHO05D010588 1.2e-11 73.2 43 88.4
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 1.2e-11 73.2 43 88.4
BraSC103t45496Z Brassica rapa HOM05D008016 ORTHO05D004271 1.2e-11 73.2 43 88.4
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 1.2e-11 73.2 43 88.4
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 1.2e-11 73.2 43 88.4
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 3.6e-11 71.6 37 83.8
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 3.9e-10 68.2 36 80.6
arahy.Tifrunner.gnm1.ann1.54SFA9 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.5e-09 66.2 36 88.9
Nitab4.5_0005831g0120 Nicotiana tabacum HOM05D008354 ORTHO05D010055 1.5e-09 66.2 33 87.9
EL10Ac6g14592 Beta vulgaris HOM05D008354 ORTHO05D010055 4.3e-09 64.7 33 97.0
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 4.3e-09 64.7 28 96.4
BolSC35t60682H Brassica oleracea HOM05D008016 ORTHO05D010588 6.3e-08 60.8 49 63.3
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 1.8e-07 59.3 26 92.3
Nitab4.5_0007400g0100 Nicotiana tabacum HOM05D008016 ORTHO05D004271 1.2e-06 56.6 26 88.5
Solyc11g072780.1 Solanum lycopersicum HOM05D001966 ORTHO05D004271 2.6e-06 55.5 33 72.7
Rhsim05G0132500 Rhododendron simsii HOM05D008016 ORTHO05D004271 3.4e-06 55.1 50 52.0


User provided reference genes

Program Settings