Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 3.4e-156 556.2 395 100.0
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 7.0e-45 186.4 317 59.9
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 6.8e-40 169.9 161 54.0
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 1.3e-38 165.6 174 52.9
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 9.2e-37 159.5 174 52.3
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 2.7e-36 157.9 177 50.3
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 1.0e-35 156.0 380 49.7
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 1.0e-35 156.0 166 51.8
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 1.3e-35 155.6 166 51.8
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 1.7e-35 155.2 320 56.9
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 3.9e-35 154.1 168 51.2
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 3.3e-34 151.0 179 50.3
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 1.6e-33 148.7 305 58.4
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 1.5e-31 142.1 165 49.1
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 3.4e-31 141.0 178 45.5
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 5.8e-31 140.2 162 47.5
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 3.0e-27 127.9 315 54.9
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 5.8e-23 113.6 287 56.1
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 2.2e-22 111.7 158 46.2
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 1.1e-21 109.4 175 38.9
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 7.1e-21 106.7 182 40.7
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 1.6e-20 105.5 174 38.5
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 3.5e-20 104.4 180 42.8
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 4.6e-20 104.0 172 40.1
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 6.0e-20 103.6 187 35.8
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 1.0e-19 102.8 187 41.7
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 2.3e-19 101.7 165 41.8
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 6.6e-19 100.1 168 42.3
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 2.5e-18 98.2 114 47.4
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 3.3e-18 97.8 155 41.3
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 5.6e-18 97.1 185 37.3
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 1.3e-17 95.9 175 36.6
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 2.8e-17 94.7 75 57.3
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 2.8e-17 94.7 320 50.0
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 1.1e-16 92.8 150 41.3
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 1.8e-16 92.0 183 35.0
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 2.4e-16 91.7 278 55.8
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 2.4e-16 91.7 181 37.6
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 9.0e-16 89.7 167 37.7
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 1.2e-15 89.4 173 37.0
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 1.5e-15 89.0 167 35.3
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 1.5e-15 89.0 150 38.7
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 2.0e-15 88.6 98 51.0
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 2.6e-15 88.2 170 34.7
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 2.6e-15 88.2 170 34.7
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 4.4e-15 87.4 178 36.0
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 7.6e-15 86.7 115 45.2
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 9.9e-15 86.3 110 45.5
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 9.9e-15 86.3 104 45.2
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 1.3e-14 85.9 174 36.2
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 2.2e-14 85.1 93 47.3
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 2.9e-14 84.7 165 35.8
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 2.9e-14 84.7 116 44.0
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 3.8e-14 84.3 165 35.8
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 4.9e-14 84.0 168 33.9
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 6.4e-14 83.6 91 47.3
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 6.4e-14 83.6 173 35.3
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 6.4e-14 83.6 172 35.5
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 6.4e-14 83.6 179 37.4
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 6.4e-14 83.6 153 37.9
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 8.4e-14 83.2 158 37.3
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 1.4e-13 82.4 165 35.8
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 2.4e-13 81.6 164 37.8
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 3.2e-13 81.3 149 37.6
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 5.4e-13 80.5 163 35.0
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 1.2e-12 79.3 154 33.8
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 1.6e-12 79.0 103 41.7
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 1.6e-12 79.0 114 41.2
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 3.5e-12 77.8 164 31.7
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 6.0e-12 77.0 89 43.8
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 6.0e-12 77.0 103 41.7
AT5G24830 Arabidopsis thaliana HOM05D000880 ORTHO05D009684 1.0e-11 76.3 156 33.3
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 1.0e-11 76.3 107 42.1
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 1.0e-11 76.3 206 64.6
Carub.0006s2268 Capsella rubella HOM05D000880 ORTHO05D009684 3.9e-11 74.3 148 35.1
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 1.1e-10 72.8 158 33.5
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 3.3e-10 71.2 179 30.7
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 4.3e-10 70.9 130 33.1
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 4.3e-10 70.9 100 40.0
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 7.3e-10 70.1 95 40.0
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 2.1e-09 68.6 85 37.6
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 2.1e-09 68.6 150 34.7
AL6G36470 Arabidopsis lyrata HOM05D000880 ORTHO05D009684 6.2e-09 67.0 147 32.7
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.1e-08 66.2 100 39.0
CiPaw.15G081300 Carya illinoinensis HOM05D000880 ORTHO05D009684 2.4e-08 65.1 93 43.0
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 2.4e-08 65.1 102 43.1
CSS0003109 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 2.0e-07 62.0 88 45.5
BcaNung01260 Brassica carinata HOM05D000880 ORTHO05D009684 3.4e-07 61.2 149 33.6
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 4.9e-06 57.4 62 50.0


User provided reference genes

Program Settings