Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040522.1 Olea europaea HOM05D005512 ORTHO05D006716 8.2e-228 793.5 435 100.0
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 3.0e-28 130.6 356 33.1
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 6.9e-25 119.4 480 30.6
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 7.6e-24 115.9 321 33.6
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 7.6e-24 115.9 321 33.6
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 4.2e-22 110.2 464 30.2
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 7.1e-22 109.4 359 30.4
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 1.1e-19 102.1 380 31.3
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 7.4e-19 99.4 445 28.5
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 4.8e-18 96.7 400 30.5
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 6.2e-18 96.3 358 30.7
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 2.4e-17 94.4 423 28.8
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 2.4e-17 94.4 350 30.9
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 6.9e-17 92.8 423 29.1
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 6.9e-17 92.8 354 30.8
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 1.5e-16 91.7 460 30.4
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 1.0e-15 89.0 393 28.2
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.3e-15 88.6 358 29.3
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.7e-15 88.2 364 29.7
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 1.7e-15 88.2 359 30.9
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 8.4e-15 85.9 351 30.5
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 1.1e-14 85.5 357 30.3
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.9e-14 84.7 362 29.0
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 5.5e-14 83.2 192 35.9
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 7.1e-14 82.8 358 28.8
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 1.6e-13 81.6 357 28.3
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.7e-13 80.9 358 28.2
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 2.7e-13 80.9 488 26.8
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 4.6e-13 80.1 355 30.1
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 6.0e-13 79.7 333 29.7
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.3e-12 78.6 358 30.4
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 1.8e-12 78.2 379 28.8
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 3.0e-12 77.4 492 26.2
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 6.7e-12 76.3 356 27.8
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 6.7e-12 76.3 443 28.0
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 6.7e-12 76.3 361 27.7
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 1.1e-11 75.5 390 27.9
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.1e-11 75.5 483 27.5
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 1.5e-11 75.1 151 38.4
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 1.9e-11 74.7 240 28.8
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 2.5e-11 74.3 343 29.7
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 9.6e-11 72.4 354 29.9
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 9.6e-11 72.4 441 26.8
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 1.6e-10 71.6 340 27.4
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 3.7e-10 70.5 324 29.0
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 6.3e-10 69.7 389 26.2
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 1.1e-09 68.9 324 28.7
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 1.4e-09 68.6 328 30.2
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 1.4e-09 68.6 351 28.2
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 1.4e-09 68.6 320 27.8
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 1.4e-09 68.6 341 29.3
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 1.8e-09 68.2 350 27.7
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 3.1e-09 67.4 334 29.9
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 3.1e-09 67.4 349 28.4
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 3.1e-09 67.4 332 29.2
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 4.1e-09 67.0 120 40.8
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 5.3e-09 66.6 335 28.4
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 6.9e-09 66.2 330 28.5
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 6.9e-09 66.2 456 25.4
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 6.9e-09 66.2 232 31.5
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 1.2e-08 65.5 344 28.2
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 1.5e-08 65.1 330 28.8
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 2.6e-08 64.3 334 28.4
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 2.6e-08 64.3 350 27.7
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 3.4e-08 63.9 457 25.6
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 5.9e-08 63.2 368 26.4
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 5.9e-08 63.2 429 27.7
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 7.6e-08 62.8 326 27.9
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 1.0e-07 62.4 369 27.9
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 1.7e-07 61.6 326 28.2
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 2.2e-07 61.2 316 28.2
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 2.9e-07 60.8 123 36.6
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 2.9e-07 60.8 327 25.4
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 3.8e-07 60.5 495 23.2
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 3.8e-07 60.5 357 26.9
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 3.8e-07 60.5 348 27.6
AUR62033525 Chenopodium quinoa HOM05D005512 ORTHO05D006716 5.0e-07 60.1 219 29.2
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 5.0e-07 60.1 347 26.2
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 5.0e-07 60.1 323 28.2
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.1e-06 58.9 497 25.2
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 1.9e-06 58.2 357 24.9
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 3.2e-06 57.4 359 27.0
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 3.2e-06 57.4 361 25.8
AUR62028570 Chenopodium quinoa HOM05D005512 ORTHO05D006716 4.2e-06 57.0 387 26.1
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 4.2e-06 57.0 362 28.5
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 4.2e-06 57.0 333 26.4
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 7.2e-06 56.2 344 27.9


User provided reference genes

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