Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040521.1 Olea europaea HOM05D004666 ORTHO05D005822 0.0e+00 1563.1 790 100.0
Dinv21227 Davidia involucrata HOM05D004666 ORTHO05D005822 1.1e-265 920.2 861 56.1
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 5.8e-248 861.3 852 55.5
TAR365G1212 Trochodendron aralioides HOM05D004666 ORTHO05D005822 2.1e-234 816.2 846 52.0
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 8.1e-234 814.3 849 52.9
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 5.3e-233 811.6 843 51.7
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 4.9e-231 805.1 854 52.7
vmacro17219 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 3.3e-227 792.3 996 47.3
vmacro22687 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 2.9e-223 779.2 982 47.4
Cc06_g05530 Coffea canephora HOM05D004666 ORTHO05D005822 1.1e-222 777.3 897 51.2
GSVIVG01032069001 Vitis vinifera HOM05D004666 ORTHO05D005822 4.6e-221 771.9 816 50.2
Thecc.01G223300 Theobroma cacao HOM05D004666 ORTHO05D005822 1.3e-220 770.4 854 51.6
Potri.008G200900 Populus trichocarpa HOM05D004666 ORTHO05D005822 3.1e-217 759.2 905 48.5
Gorai.001G233200 Gossypium raimondii HOM05D004666 ORTHO05D005822 2.9e-215 752.7 870 48.0
Manes.13G012000 Manihot esculenta HOM05D004666 ORTHO05D005822 2.5e-214 749.6 868 48.6
Gohir.A07G200500 Gossypium hirsutum HOM05D004666 ORTHO05D005822 9.4e-214 747.7 870 48.2
Sp1g17360 Schrenkiella parvula HOM05D004666 ORTHO05D005822 2.7e-213 746.1 806 50.2
COL.COLO4_15658 Corchorus olitorius HOM05D004666 ORTHO05D005822 1.0e-212 744.2 983 43.7
Lsat_1_v5_gn_1_48480 Lactuca sativa HOM05D004666 ORTHO05D005822 3.0e-212 742.7 792 51.3
SGA_v2.0_scaffold147G36363 Striga asiatica HOM05D004666 ORTHO05D005822 3.9e-212 742.3 791 54.1
Migut.J00966 Erythranthe guttata HOM05D004666 ORTHO05D005822 1.5e-211 740.3 810 52.3
A08p29790 Brassica napus HOM05D004666 ORTHO05D005822 1.3e-210 737.3 815 50.2
Nitab4.5_0000794g0050 Nicotiana tabacum HOM05D004666 ORTHO05D005822 4.1e-209 732.3 905 46.9
Thhalv10006802m.g Eutrema salsugineum HOM05D004666 ORTHO05D005822 9.1e-209 731.1 807 49.8
FvH4_6g18260 Fragaria vesca HOM05D004666 ORTHO05D005822 2.0e-208 729.9 1011 43.8
Gohir.D07G206800 Gossypium hirsutum HOM05D004666 ORTHO05D005822 4.5e-208 728.8 874 47.6
TWI34G1071 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 4.5e-208 728.8 857 48.8
BraA08t34913Z Brassica rapa HOM05D004666 ORTHO05D005822 1.0e-207 727.6 814 49.5
SalBow3G3865 Salvia bowleyana HOM05D004666 ORTHO05D005822 5.0e-207 725.3 825 50.5
BolC8t49572H Brassica oleracea HOM05D004666 ORTHO05D005822 6.5e-207 724.9 814 49.4
Carub.0001s1905 Capsella rubella HOM05D004666 ORTHO05D005822 1.4e-206 723.8 801 49.7
BolC5t30496H Brassica oleracea HOM05D004666 ORTHO05D005822 6.1e-205 718.4 800 49.6
C05p17890 Brassica napus HOM05D004666 ORTHO05D005822 7.9e-205 718.0 796 49.9
C08p19490 Brassica napus HOM05D004666 ORTHO05D005822 1.4e-204 717.2 813 49.2
A06p15660 Brassica napus HOM05D004666 ORTHO05D005822 5.1e-204 715.3 800 48.4
BraA06t24675Z Brassica rapa HOM05D004666 ORTHO05D005822 5.1e-204 715.3 800 48.4
RcHm_v2.0_Chr4g0409331 Rosa chinensis HOM05D004666 ORTHO05D005822 1.3e-202 710.7 1036 42.2
Prupe.7G114200 Prunus persica HOM05D004666 ORTHO05D005822 1.8e-201 706.8 968 45.0
BcaB03g12912 Brassica carinata HOM05D004666 ORTHO05D005822 2.4e-201 706.4 807 47.5
CARHR020050 Cardamine hirsuta HOM05D004666 ORTHO05D005822 5.3e-201 705.3 805 48.8
Atru.chr8.1588 Acer truncatum HOM05D004666 ORTHO05D005822 1.2e-200 704.1 750 52.1
Lj2C133G10 Lonicera japonica HOM05D004666 ORTHO05D005822 5.9e-200 701.8 999 43.0
Aa31LG7G4140 Aethionema arabicum HOM05D004666 ORTHO05D005822 2.2e-199 699.9 828 47.2
AT1G19485 Arabidopsis thaliana HOM05D004666 ORTHO05D005822 3.8e-199 699.1 807 48.6
HanXRQChr01g0029141 Helianthus annuus HOM05D004666 ORTHO05D005822 3.8e-199 699.1 851 48.5
DCAR_013376 Daucus carota HOM05D004666 ORTHO05D005822 6.5e-199 698.4 884 47.7
THA.LOC104827512 Tarenaya hassleriana HOM05D004666 ORTHO05D005822 6.5e-199 698.4 832 47.4
Aqoxy3G00997 Aquilegia oxysepala HOM05D004666 ORTHO05D005822 8.0e-197 691.4 923 45.6
EL10Ac7g16949 Beta vulgaris HOM05D004666 ORTHO05D005822 6.7e-196 688.3 950 41.2
CANSAT54G2995 Cannabis sativa HOM05D004666 ORTHO05D005822 7.5e-195 684.9 816 45.3
Nitab4.5_0009916g0020 Nicotiana tabacum HOM05D004666 ORTHO05D005822 9.7e-195 684.5 903 47.2
Sopen09g004490 Solanum pennellii HOM05D004666 ORTHO05D005822 2.8e-194 682.9 881 46.2
Solyc09g009710.4 Solanum lycopersicum HOM05D004666 ORTHO05D005822 1.4e-193 680.6 881 46.3
FvH4_7g02500 Fragaria vesca HOM05D004666 ORTHO05D005822 5.3e-193 678.7 1003 41.9
MD09G1081300 Malus domestica HOM05D004666 ORTHO05D005822 2.0e-192 676.8 954 43.8
PSO384G1605 Papaver somniferum HOM05D004666 ORTHO05D005822 1.7e-191 673.7 1049 40.5
PSO425G0050 Papaver somniferum HOM05D004666 ORTHO05D005822 8.0e-189 664.8 1043 39.8
MD12G1022600 Malus domestica HOM05D004666 ORTHO05D005822 1.0e-188 664.5 937 44.6
arahy.Tifrunner.gnm1.ann1.T4KAXF Arachis hypogaea HOM05D004666 ORTHO05D005822 1.3e-186 657.5 884 43.6
AL1G32230 Arabidopsis lyrata HOM05D004666 ORTHO05D005822 4.8e-186 655.6 706 50.8
PGR142G0825 Punica granatum HOM05D004666 ORTHO05D005822 4.5e-184 649.0 893 45.6
MELO3C009457.2 Cucumis melo HOM05D004666 ORTHO05D005822 1.3e-183 647.5 861 43.7
arahy.Tifrunner.gnm1.ann1.WFL2XE Arachis hypogaea HOM05D004666 ORTHO05D005822 1.7e-183 647.1 867 43.3
arahy.Tifrunner.gnm1.ann1.G8H5C8 Arachis hypogaea HOM05D004666 ORTHO05D005822 5.0e-183 645.6 897 42.4
Sed0022470 Sechium edule HOM05D004666 ORTHO05D005822 8.5e-183 644.8 867 42.6
TWI73G1120 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 5.5e-182 642.1 860 44.8
Medtr1g060580 Medicago truncatula HOM05D004666 ORTHO05D005822 7.2e-182 641.7 904 43.3
Ciclev10011197m.g Citrus clementina HOM05D004666 ORTHO05D005822 4.7e-181 639.0 698 49.1
FAN06G2408 Fragaria x ananassa HOM05D004666 ORTHO05D005822 6.1e-181 638.6 1009 42.0
Peaxi162Scf00015g00639 Petunia axillaris HOM05D004666 ORTHO05D005822 6.1e-181 638.6 919 46.0
Hund26220 Selenicereus undatus HOM05D004666 ORTHO05D005822 4.4e-179 632.5 1067 36.6
TPR.G35431 Trifolium pratense HOM05D004666 ORTHO05D005822 4.4e-179 632.5 930 42.8
MBI17_g35786_MAGBIO Magnolia biondii HOM05D004666 ORTHO05D005822 2.2e-178 630.2 791 45.4
CsaV3_3G037120 Cucumis sativus L. HOM05D004666 ORTHO05D005822 2.8e-178 629.8 887 41.7
ECA248G3102 Erigeron canadensis HOM05D004666 ORTHO05D005822 4.9e-178 629.0 1035 39.0
Lalb_Chr02g0155381 Lupinus albus HOM05D004666 ORTHO05D005822 6.3e-178 628.6 994 39.4
Ca_26672_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 3.1e-177 626.3 908 41.3
Ca_30723_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 3.1e-177 626.3 908 41.3
Psat6g082920 Pisum sativum HOM05D004666 ORTHO05D005822 1.3e-175 620.9 883 42.7
AUR62033523 Chenopodium quinoa HOM05D004666 ORTHO05D005822 1.5e-174 617.5 972 39.3
ClCG10G019140 Citrullus lanatus HOM05D004666 ORTHO05D005822 1.5e-174 617.5 857 43.4
Phvul.011G176600 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 4.9e-170 602.4 1028 40.0
ECA248G2596 Erigeron canadensis HOM05D004666 ORTHO05D005822 1.4e-169 600.9 1050 38.0
FAN03G3209 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.8e-169 600.5 1090 36.1
Glyma.10G068100 Glycine max HOM05D004666 ORTHO05D005822 2.7e-168 596.7 1045 36.4
Lj5g0013478 Lotus japonicus HOM05D004666 ORTHO05D005822 8.6e-167 591.7 1007 36.5
arahy.Tifrunner.gnm1.ann1.LSN657 Arachis hypogaea HOM05D004666 ORTHO05D005822 2.1e-165 587.0 872 40.1
unitig_749.g14294 Utricularia gibba HOM05D004666 ORTHO05D005822 4.7e-165 585.9 796 43.0
Ah.08g210700 Amaranthus hybridus HOM05D004666 ORTHO05D005822 6.8e-164 582.0 998 37.2
Nn2g14084 Nelumbo nucifera HOM05D004666 ORTHO05D005822 1.5e-163 580.9 615 52.8
Phvul.007G229800 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 1.9e-161 573.9 1038 35.5
Sed0014063 Sechium edule HOM05D004666 ORTHO05D005822 2.4e-161 573.5 1005 37.0
RcHm_v2.0_Chr3g0472691 Rosa chinensis HOM05D004666 ORTHO05D005822 1.6e-160 570.9 591 49.1
FAN02G3237 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.9e-158 563.9 794 43.5
Duzib114G0569 Durio zibethinus HOM05D004666 ORTHO05D005822 9.5e-158 561.6 825 44.5
VMungo0720G2175 Vigna mungo HOM05D004666 ORTHO05D005822 1.2e-157 561.2 1111 34.6
Lj5g0018797 Lotus japonicus HOM05D004666 ORTHO05D005822 6.8e-156 555.4 903 39.1
Sc02g0001000 Simmondsia chinensis HOM05D004666 ORTHO05D005822 6.0e-152 542.3 994 38.5
Haze_19573 Corylus avellana HOM05D004666 ORTHO05D005822 1.9e-150 537.3 732 44.7
Peaxi162Scf00036g00125 Petunia axillaris HOM05D004666 ORTHO05D005822 8.1e-149 531.9 925 41.9
CDE08G1659 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 9.2e-145 518.5 783 37.2
FAN05G5602 Fragaria x ananassa HOM05D004666 ORTHO05D005822 5.8e-139 499.2 804 38.2
HPP92_015079 Vanilla planifolia HOM05D004666 ORTHO05D005822 5.4e-137 492.7 447 53.5
Potri.006G036601 Populus trichocarpa HOM05D004666 ORTHO05D005822 9.6e-134 481.9 659 43.6
Sabra08G0160300 Salix brachista HOM05D004666 ORTHO05D005822 1.3e-130 471.5 613 48.1
Sabra12G0045300 Salix brachista HOM05D004666 ORTHO05D005822 8.7e-127 458.8 649 45.5
Zm00001eb147330 Zea mays HOM05D004666 ORTHO05D005822 1.2e-120 438.3 517 45.5
AUR62028568 Chenopodium quinoa HOM05D004666 ORTHO05D005822 4.5e-115 419.9 687 39.2
Eucgr.K02035 Eucalyptus grandis HOM05D004666 ORTHO05D005822 3.0e-111 407.1 283 64.0
Os01g0858000 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 3.6e-104 383.6 342 52.6
Pp3c1_31470 Physcomitrium patens HOM05D004666 ORTHO05D005822 1.5e-102 378.3 750 32.5
AagrBONN_evm.TU.Sc2ySwM_344.3422 Anthoceros agrestis HOM05D004666 ORTHO05D005822 1.6e-101 374.8 796 31.8
Mapoly0021s0027 Marchantia polymorpha HOM05D004666 ORTHO05D005822 1.2e-99 368.6 745 34.5
Cpa.g.sc5.49 Carica papaya HOM05D004666 ORTHO05D005822 6.1e-88 329.7 315 52.4
PGSC0003DMG400008959 Solanum tuberosum HOM05D004666 ORTHO05D005822 1.2e-83 315.5 521 42.8
Hma1.2p1_2087F.1_g313760 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 1.9e-73 281.6 293 49.5
Rhsim09G0020300 Rhododendron simsii HOM05D004666 ORTHO05D005822 8.0e-64 249.6 467 38.5
ATR0820G266 Amborella trichopoda HOM05D004666 ORTHO05D005822 3.0e-63 247.7 278 45.7
Cpa.g.c36918 Carica papaya HOM05D004666 ORTHO05D005822 9.8e-54 216.1 303 49.5
FAN05G4874 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.4e-52 211.5 307 47.6
FAN09G1276 Fragaria x ananassa HOM05D004666 ORTHO05D005822 7.0e-52 209.9 219 50.7
CBR_g38478 Chara braunii HOM05D004666 ORTHO05D005822 1.6e-51 208.8 264 41.7
Haze_16425 Corylus avellana HOM05D004666 ORTHO05D005822 3.5e-51 207.6 289 42.2
RcHm_v2.0_Chr3g0472701 Rosa chinensis HOM05D004666 ORTHO05D005822 3.5e-51 207.6 203 51.2
ATR0820G291 Amborella trichopoda HOM05D004666 ORTHO05D005822 2.5e-49 201.4 338 33.7
SEGI_09998 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 1.8e-47 195.3 133 64.7
RhsimUnG0189100 Rhododendron simsii HOM05D004666 ORTHO05D005822 7.5e-46 189.9 211 48.8
Hma1.2p1_2087F.1_g313780 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 1.5e-41 175.6 269 41.6
Hma1.2p1_0084F.1_g043480 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 4.4e-38 164.1 208 44.2
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 2.1e-35 155.2 179 44.7
FAN14G5421 Fragaria x ananassa HOM05D004666 ORTHO05D005822 7.8e-35 153.3 226 39.8
QL03p004438 Quercus lobata HOM05D004666 ORTHO05D005822 3.9e-34 151.0 200 42.0
Hma1.2p1_0084F.1_g043500 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 2.8e-32 144.8 342 33.9
Eucgr.L02043 Eucalyptus grandis HOM05D004666 ORTHO05D005822 4.4e-30 137.5 209 40.2
QL03p004414 Quercus lobata HOM05D004666 ORTHO05D005822 5.8e-30 137.1 305 32.1
SEGI_32780 Sequoiadendron giganteum HOM05D004666 ORTHO05D005822 6.0e-27 127.1 208 40.9
Hma1.2p1_0084F.1_g043490 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 5.1e-26 124.0 85 62.4
CDE08G0815 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 7.3e-25 120.2 189 38.1
CSS0049785 Camellia sinensis var. sinensis HOM05D004666 ORTHO05D005822 2.8e-24 118.2 107 55.1
SHI23868 Sapria himalayana HOM05D004666 ORTHO05D005822 7.6e-22 110.2 208 38.5
Sabra06G0024800 Salix brachista HOM05D004666 ORTHO05D005822 1.4e-20 105.9 186 38.7
FAN10G4251 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.9e-20 105.5 536 29.3
arahy.Tifrunner.gnm1.ann1.AE8L4W Arachis hypogaea HOM05D004666 ORTHO05D005822 5.6e-17 94.0 90 50.0
Os02g0307300 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 6.9e-15 87.0 182 33.0
Haze_16424 Corylus avellana HOM05D004666 ORTHO05D005822 7.9e-11 73.6 124 36.3
RcHm_v2.0_Chr7g0223981 Rosa chinensis HOM05D004666 ORTHO05D005822 7.9e-11 73.6 60 51.7
QL04p079053 Quercus lobata HOM05D004666 ORTHO05D005822 5.1e-10 70.9 425 23.1
Os07g0454400 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 1.5e-09 69.3 79 46.8
Sabra16G0037300 Salix brachista HOM05D004666 ORTHO05D017783 6.9e-07 60.5 33 75.8


User provided reference genes

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