Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040486.2 Olea europaea HOM05D005279 ORTHO05D006757 5.0e-232 807.4 395 100.0
Oeu010147.1 Olea europaea HOM05D005279 ORTHO05D006757 8.3e-211 736.9 395 90.9
Migut.F01884 Erythranthe guttata HOM05D005279 ORTHO05D006757 4.3e-175 618.2 391 75.4
MSTRG.320 Avicennia marina HOM05D005279 ORTHO05D006757 2.9e-171 605.5 394 75.4
Dinv29119 Davidia involucrata HOM05D005279 ORTHO05D006757 6.4e-171 604.4 387 75.2
TAR633G0866 Trochodendron aralioides HOM05D005279 ORTHO05D006757 7.6e-164 580.9 387 72.4
SalBow6G4947 Salvia bowleyana HOM05D005279 ORTHO05D006757 9.9e-164 580.5 387 72.6
Solyc04g051310.4 Solanum lycopersicum HOM05D005279 ORTHO05D006757 1.7e-163 579.7 391 72.1
Sopen04g022730 Solanum pennellii HOM05D005279 ORTHO05D006757 6.4e-163 577.8 391 71.9
SGA_v2.0_scaffold122G33172 Striga asiatica HOM05D005279 ORTHO05D006757 6.4e-163 577.8 388 70.9
Haze_04526 Corylus avellana HOM05D005279 ORTHO05D006757 4.2e-162 575.1 390 72.1
FAN02G0830 Fragaria x ananassa HOM05D005279 ORTHO05D006757 5.4e-162 574.7 391 69.8
CSS0033137 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 9.3e-162 573.9 389 71.0
CSS0033709 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 9.3e-162 573.9 389 71.0
FvH4_6g00750 Fragaria vesca HOM05D005279 ORTHO05D006757 2.1e-161 572.8 390 69.7
FAN14G2044 Fragaria x ananassa HOM05D005279 ORTHO05D006757 2.1e-161 572.8 390 69.7
FAN05G0195 Fragaria x ananassa HOM05D005279 ORTHO05D006757 6.0e-161 571.2 390 70.0
Cfa006283 Carpinus fangiana HOM05D005279 ORTHO05D006757 1.0e-160 570.5 387 72.4
Prupe.6G359100 Prunus persica HOM05D005279 ORTHO05D006757 1.3e-160 570.1 390 69.7
Nn1g08317 Nelumbo nucifera HOM05D005279 ORTHO05D006757 1.7e-160 569.7 387 70.5
Rhsim09G0131400 Rhododendron simsii HOM05D005279 ORTHO05D006757 2.3e-160 569.3 404 68.3
Cc09_g03410 Coffea canephora HOM05D005279 ORTHO05D006757 3.9e-160 568.5 391 70.8
FAN09G4620 Fragaria x ananassa HOM05D005279 ORTHO05D006757 3.9e-160 568.5 390 69.5
MD12G1258400 Malus domestica HOM05D005279 ORTHO05D006757 2.5e-159 565.8 387 69.5
Manes.09G184200 Manihot esculenta HOM05D005279 ORTHO05D006757 8.1e-158 560.8 387 68.2
Peaxi162Scf00994g00010 Petunia axillaris HOM05D005279 ORTHO05D006757 1.1e-157 560.5 391 70.6
RcHm_v2.0_Chr3g0448231 Rosa chinensis HOM05D005279 ORTHO05D006757 1.8e-157 559.7 390 68.2
Sc09g0001590 Simmondsia chinensis HOM05D005279 ORTHO05D006757 4.0e-157 558.5 387 69.5
Ciclev10011262m.g Citrus clementina HOM05D005279 ORTHO05D006757 1.5e-156 556.6 387 68.2
Aqoxy2G03953 Aquilegia oxysepala HOM05D005279 ORTHO05D006757 5.8e-156 554.7 387 69.0
Atru.chr12.2109 Acer truncatum HOM05D005279 ORTHO05D006757 1.7e-155 553.1 387 68.2
CANSAT54G1354 Cannabis sativa HOM05D005279 ORTHO05D006757 2.9e-155 552.4 389 67.9
Potri.013G087400 Populus trichocarpa HOM05D005279 ORTHO05D006757 2.9e-155 552.4 393 67.4
vmacro10395 Vaccinium macrocarpon HOM05D005279 ORTHO05D006757 8.4e-155 550.8 387 66.7
Hund29802 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.1e-154 550.4 387 69.5
Hund29803 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.1e-154 550.4 387 69.5
Ca_07964_v3 Cicer arietinum L. HOM05D005279 ORTHO05D006757 1.4e-154 550.1 387 69.3
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea HOM05D005279 ORTHO05D006757 7.1e-154 547.7 387 69.3
AUR62000356 Chenopodium quinoa HOM05D005279 ORTHO05D006757 2.1e-153 546.2 387 67.7
TWI23G0564 Tripterygium wilfordii HOM05D005279 ORTHO05D006757 1.0e-152 543.9 388 68.3
Glyma.18G240300 Glycine max HOM05D005279 ORTHO05D006757 1.3e-152 543.5 387 68.2
Glyma.09G252300 Glycine max HOM05D005279 ORTHO05D006757 3.0e-152 542.3 387 68.2
ClCG11G011000 Citrullus lanatus HOM05D005279 ORTHO05D006757 3.9e-152 542.0 389 65.8
Cpa.g.c32193 Carica papaya HOM05D005279 ORTHO05D006757 1.1e-151 540.4 389 66.3
VMungo1383G2490 Vigna mungo HOM05D005279 ORTHO05D006757 1.1e-151 540.4 387 68.7
Ah.04g158770 Amaranthus hybridus HOM05D005279 ORTHO05D006757 3.3e-151 538.9 387 66.9
PGR031G1864 Punica granatum HOM05D005279 ORTHO05D006757 7.4e-151 537.7 387 66.7
Phvul.008G055900 Phaseolus vulgaris HOM05D005279 ORTHO05D006757 1.3e-150 537.0 387 68.2
Sabra13G0070000 Salix brachista HOM05D005279 ORTHO05D006757 1.3e-150 537.0 394 64.7
Medtr7g079510 Medicago truncatula HOM05D005279 ORTHO05D006757 1.6e-150 536.6 387 67.7
MELO3C008759.2 Cucumis melo HOM05D005279 ORTHO05D006757 2.8e-150 535.8 389 65.0
Eucgr.H01378 Eucalyptus grandis HOM05D005279 ORTHO05D006757 3.7e-150 535.4 387 66.7
TPR.G32005 Trifolium pratense HOM05D005279 ORTHO05D006757 8.1e-150 534.3 387 68.0
Lsat_1_v5_gn_9_48740 Lactuca sativa HOM05D005279 ORTHO05D006757 1.4e-149 533.5 390 66.7
Sed0005684 Sechium edule HOM05D005279 ORTHO05D006757 1.4e-149 533.5 389 64.8
EL10Ac4g09419 Beta vulgaris HOM05D005279 ORTHO05D006757 2.4e-149 532.7 390 64.6
CsaV3_2G009490 Cucumis sativus L. HOM05D005279 ORTHO05D006757 2.4e-149 532.7 389 64.8
COL.COLO4_19830 Corchorus olitorius HOM05D005279 ORTHO05D006757 4.0e-149 531.9 386 64.5
Duzib128G1767 Durio zibethinus HOM05D005279 ORTHO05D006757 5.3e-149 531.6 386 66.6
PSO675G1387 Papaver somniferum HOM05D005279 ORTHO05D006757 1.5e-148 530.0 390 64.4
CiPaw.08G116500 Carya illinoinensis HOM05D005279 ORTHO05D006757 1.3e-147 526.9 387 66.9
Lj1g0001090 Lotus japonicus HOM05D005279 ORTHO05D006757 1.3e-147 526.9 387 67.2
Thhalv10012976m.g Eutrema salsugineum HOM05D005279 ORTHO05D006757 3.8e-147 525.4 387 64.3
Lalb_Chr19g0126771 Lupinus albus HOM05D005279 ORTHO05D006757 1.1e-146 523.9 387 66.7
Duzib177G0028 Durio zibethinus HOM05D005279 ORTHO05D006757 3.2e-146 522.3 386 65.3
THA.LOC104802949 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 5.5e-146 521.5 387 63.8
HanXRQChr05g0156961 Helianthus annuus HOM05D005279 ORTHO05D006757 7.1e-146 521.2 393 64.1
unitig_26.g8932 Utricularia gibba HOM05D005279 ORTHO05D006757 2.1e-145 519.6 390 64.1
A03p07830 Brassica napus HOM05D005279 ORTHO05D006757 2.7e-145 519.2 390 63.8
Sp6g27630 Schrenkiella parvula HOM05D005279 ORTHO05D006757 3.5e-145 518.8 387 63.0
C03p09050 Brassica napus HOM05D005279 ORTHO05D006757 6.0e-145 518.1 390 63.6
Carub.0006s1472 Capsella rubella HOM05D005279 ORTHO05D006757 1.0e-144 517.3 387 63.0
Aa31LG11G13130 Aethionema arabicum HOM05D005279 ORTHO05D006757 1.8e-144 516.5 387 61.8
CARHR196710 Cardamine hirsuta HOM05D005279 ORTHO05D006757 2.3e-144 516.2 387 63.0
Sed0008551 Sechium edule HOM05D005279 ORTHO05D006757 2.3e-144 516.2 390 62.8
BolC3t13400H Brassica oleracea HOM05D005279 ORTHO05D006757 3.0e-144 515.8 390 63.6
DCAR_023849 Daucus carota HOM05D005279 ORTHO05D006757 3.9e-144 515.4 395 63.3
Hund07324 Selenicereus undatus HOM05D005279 ORTHO05D006757 3.9e-144 515.4 402 62.4
Gohir.D08G244200 Gossypium hirsutum HOM05D005279 ORTHO05D006757 1.9e-143 513.1 386 63.7
AT5G16520 Arabidopsis thaliana HOM05D005279 ORTHO05D006757 2.5e-143 512.7 387 61.8
BcaB01g04978 Brassica carinata HOM05D005279 ORTHO05D006757 7.4e-143 511.1 390 63.1
Gohir.A08G223900 Gossypium hirsutum HOM05D005279 ORTHO05D006757 1.6e-142 510.0 386 63.0
Gorai.004G260500 Gossypium raimondii HOM05D005279 ORTHO05D006757 3.7e-142 508.8 386 63.5
AL6G27470 Arabidopsis lyrata HOM05D005279 ORTHO05D006757 6.2e-142 508.1 387 61.5
Lsat_1_v5_gn_8_2100 Lactuca sativa HOM05D005279 ORTHO05D006757 1.1e-141 507.3 390 64.9
THA.LOC104827466 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 1.1e-141 507.3 377 64.5
MBI07_g25290_MAGBIO Magnolia biondii HOM05D005279 ORTHO05D006757 7.9e-137 491.1 368 62.8
HanXRQChr11g0323931 Helianthus annuus HOM05D005279 ORTHO05D006757 1.5e-135 486.9 390 60.0
SHI13733 Sapria himalayana HOM05D005279 ORTHO05D006757 1.1e-133 480.7 391 60.1
ATR0609G131 Amborella trichopoda HOM05D005279 ORTHO05D006757 6.9e-133 478.0 388 58.5
Lju5221C0T3 Lonicera japonica HOM05D005279 ORTHO05D006757 6.9e-133 478.0 384 62.5
GSVIVG01019132001 Vitis vinifera HOM05D005279 ORTHO05D006757 6.5e-131 471.5 309 71.8
ECA232G1216 Erigeron canadensis HOM05D005279 ORTHO05D006757 8.2e-126 454.5 309 70.6
Lj1A580T7 Lonicera japonica HOM05D005279 ORTHO05D006757 8.2e-126 454.5 343 64.7
SEGI_07718 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 7.7e-124 448.0 390 54.4
CDE09G0872 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 2.2e-123 446.4 346 60.7
ECA233G5391 Erigeron canadensis HOM05D005279 ORTHO05D006757 9.4e-122 441.0 309 65.7
PGSC0003DMG402016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 4.4e-119 432.2 260 78.8
Nitab4.5_0000276g0070 Nicotiana tabacum HOM05D005279 ORTHO05D006757 9.7e-119 431.0 285 73.0
QL01p050313 Quercus lobata HOM05D005279 ORTHO05D006757 2.0e-116 423.3 279 73.8
Nitab4.5_0000456g0100 Nicotiana tabacum HOM05D005279 ORTHO05D006757 2.5e-114 416.4 277 72.6
Os01g0100500 Oryza sativa ssp. japonica HOM05D005279 ORTHO05D006757 2.0e-108 396.7 382 50.3
Zm00001eb017080 Zea mays HOM05D005279 ORTHO05D006757 4.5e-108 395.6 388 50.3
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea HOM05D005279 ORTHO05D006757 9.4e-106 387.9 387 52.7
Zm00001eb334030 Zea mays HOM05D005279 ORTHO05D006757 6.7e-104 381.7 398 48.2
CAN.G29.21 Capsicum annuum HOM05D005279 ORTHO05D006757 7.2e-98 361.7 221 76.5
AUR62012181 Chenopodium quinoa HOM05D005279 ORTHO05D006757 2.3e-96 356.7 301 55.8
Psat3g104240 Pisum sativum HOM05D005279 ORTHO05D006757 8.3e-94 348.2 233 69.5
AUR62006699 Chenopodium quinoa HOM05D005279 ORTHO05D006757 1.1e-93 347.8 237 67.5
EL10Ac2g04762 Beta vulgaris HOM05D005279 ORTHO05D006757 3.1e-93 346.3 303 54.5
BraA03t10110Z Brassica rapa HOM05D005279 ORTHO05D006757 2.9e-91 339.7 236 66.5
HPP92_025240 Vanilla planifolia HOM05D005279 ORTHO05D006757 5.0e-91 339.0 395 46.6
Dinv09865 Davidia involucrata HOM05D005279 ORTHO05D006757 1.9e-90 337.0 203 79.3
Hund16011 Selenicereus undatus HOM05D005279 ORTHO05D006757 2.0e-87 327.0 391 44.0
CDE02G4206 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 6.3e-86 322.0 252 58.7
AagrBONN_evm.TU.Sc2ySwM_228.5255 Anthoceros agrestis HOM05D005279 ORTHO05D006757 1.6e-81 307.4 388 38.9
CDE12G0554 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 6.0e-76 288.9 197 65.5
Thecc.05G206100 Theobroma cacao HOM05D005279 ORTHO05D006757 1.6e-73 280.8 202 63.9
HPP92_021393 Vanilla planifolia HOM05D005279 ORTHO05D006757 7.5e-71 271.9 399 39.3
RcHm_v2.0_Chr7g0239281 Rosa chinensis HOM05D005279 ORTHO05D006757 6.0e-52 209.1 133 72.2
RcHm_v2.0_Chr2g0115301 Rosa chinensis HOM05D005279 ORTHO05D006757 6.6e-51 205.7 136 69.1
Ah.16g102880 Amaranthus hybridus HOM05D005279 ORTHO05D006757 1.9e-50 204.1 196 49.0
AUR62022817 Chenopodium quinoa HOM05D005279 ORTHO05D006757 5.3e-48 196.1 382 33.5
Actinidia38912 Actinidia chinensis HOM05D005279 ORTHO05D006757 8.4e-38 162.2 95 80.0
Nitab4.5_0000276g0080 Nicotiana tabacum HOM05D005279 ORTHO05D006757 6.0e-36 156.0 127 63.0
Nitab4.5_0000456g0110 Nicotiana tabacum HOM05D005279 ORTHO05D006757 3.0e-35 153.7 127 62.2
Actinidia34772 Actinidia chinensis HOM05D005279 ORTHO05D006757 4.3e-34 149.8 123 58.5
Hma1.2p1_0171F.1_g075730 Hydrangea macrophylla HOM05D005279 ORTHO05D006757 8.4e-22 109.0 94 61.7


User provided reference genes

Program Settings