Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040482.1 Olea europaea HOM05D006660 ORTHO05D008184 2.1e-230 802.0 401 100.0
Nitab4.5_0000130g0170 Nicotiana tabacum HOM05D006660 ORTHO05D008184 5.1e-184 647.9 404 79.2
CSS0034515 Camellia sinensis var. sinensis HOM05D006660 ORTHO05D008184 3.3e-183 645.2 403 79.4
Nitab4.5_0008746g0020 Nicotiana tabacum HOM05D006660 ORTHO05D008184 5.7e-183 644.4 404 79.0
Dinv07831 Davidia involucrata HOM05D006660 ORTHO05D008184 2.2e-182 642.5 403 79.2
Solyc07g049590.3 Solanum lycopersicum HOM05D006660 ORTHO05D008184 6.3e-182 641.0 404 78.0
Rhsim04G0045800 Rhododendron simsii HOM05D006660 ORTHO05D008184 8.2e-182 640.6 402 78.9
Sopen07g024990 Solanum pennellii HOM05D006660 ORTHO05D008184 1.8e-181 639.4 404 77.7
PGSC0003DMG400006428 Solanum tuberosum HOM05D006660 ORTHO05D008184 2.6e-180 635.6 404 77.5
Actinidia10783 Actinidia chinensis HOM05D006660 ORTHO05D008184 5.9e-180 634.4 402 78.4
Cc10_g08860 Coffea canephora HOM05D006660 ORTHO05D008184 3.8e-179 631.7 404 77.7
Peaxi162Scf01333g00136 Petunia axillaris HOM05D006660 ORTHO05D008184 6.5e-179 630.9 405 77.5
CAN.G784.8 Capsicum annuum HOM05D006660 ORTHO05D008184 8.5e-179 630.6 404 76.5
Haze_12725 Corylus avellana HOM05D006660 ORTHO05D008184 2.5e-178 629.0 403 77.9
TWI36G0095 Tripterygium wilfordii HOM05D006660 ORTHO05D008184 2.1e-177 625.9 403 77.7
Thecc.01G186300 Theobroma cacao HOM05D006660 ORTHO05D008184 4.6e-177 624.8 402 78.6
Nn1g07385 Nelumbo nucifera HOM05D006660 ORTHO05D008184 1.0e-176 623.6 403 77.4
MSTRG.14936 Avicennia marina HOM05D006660 ORTHO05D008184 3.0e-176 622.1 410 76.1
Atru.chr6.3323 Acer truncatum HOM05D006660 ORTHO05D008184 5.1e-176 621.3 402 77.4
Gohir.A07G086100 Gossypium hirsutum HOM05D006660 ORTHO05D008184 3.3e-175 618.6 403 76.7
CiPaw.04G193900 Carya illinoinensis HOM05D006660 ORTHO05D008184 1.7e-174 616.3 403 76.4
Gorai.001G097700 Gossypium raimondii HOM05D006660 ORTHO05D008184 1.7e-174 616.3 403 76.2
Potri.014G163200 Populus trichocarpa HOM05D006660 ORTHO05D008184 4.8e-174 614.8 403 75.7
TAR626G1025 Trochodendron aralioides HOM05D006660 ORTHO05D008184 1.1e-173 613.6 402 75.4
SGA_v2.0_scaffold73G24530 Striga asiatica HOM05D006660 ORTHO05D008184 3.1e-173 612.1 406 75.4
Sc20g0003860 Simmondsia chinensis HOM05D006660 ORTHO05D008184 4.1e-173 611.7 403 75.4
Prupe.3G205300 Prunus persica HOM05D006660 ORTHO05D008184 6.9e-173 610.9 403 76.4
Sabra14G0124600 Salix brachista HOM05D006660 ORTHO05D008184 6.9e-173 610.9 402 75.9
Gohir.D07G091200 Gossypium hirsutum HOM05D006660 ORTHO05D008184 9.1e-173 610.5 403 75.4
HanXRQChr10g0306331 Helianthus annuus HOM05D006660 ORTHO05D008184 8.5e-171 604.0 406 73.4
DCAR_019721 Daucus carota HOM05D006660 ORTHO05D008184 1.1e-170 603.6 403 73.9
Eucgr.K00713 Eucalyptus grandis HOM05D006660 ORTHO05D008184 1.1e-170 603.6 404 73.5
Lsat_1_v5_gn_5_124741 Lactuca sativa HOM05D006660 ORTHO05D008184 1.1e-170 603.6 401 74.3
COL.COLO4_35986 Corchorus olitorius HOM05D006660 ORTHO05D008184 2.5e-170 602.4 402 75.1
Manes.12G060700 Manihot esculenta HOM05D006660 ORTHO05D008184 3.2e-170 602.1 402 74.9
PGR142G4370 Punica granatum HOM05D006660 ORTHO05D008184 5.5e-170 601.3 405 74.8
RcHm_v2.0_Chr2g0157231 Rosa chinensis HOM05D006660 ORTHO05D008184 7.2e-170 600.9 404 76.2
AUR62015095 Chenopodium quinoa HOM05D006660 ORTHO05D008184 4.7e-169 598.2 403 72.7
CANSAT64G1453 Cannabis sativa HOM05D006660 ORTHO05D008184 3.0e-168 595.5 403 72.5
AUR62017555 Chenopodium quinoa HOM05D006660 ORTHO05D008184 3.0e-168 595.5 416 70.4
FAN02G1797 Fragaria x ananassa HOM05D006660 ORTHO05D008184 3.0e-168 595.5 404 75.0
FAN14G2696 Fragaria x ananassa HOM05D006660 ORTHO05D008184 5.1e-168 594.7 405 74.8
FAN14G4026 Fragaria x ananassa HOM05D006660 ORTHO05D008184 5.1e-168 594.7 405 74.8
Duzib133G0254 Durio zibethinus HOM05D006660 ORTHO05D008184 8.8e-168 594.0 403 73.4
Psat5g103920 Pisum sativum HOM05D006660 ORTHO05D008184 7.4e-167 590.9 405 74.1
THA.LOC104808860 Tarenaya hassleriana HOM05D006660 ORTHO05D008184 7.4e-167 590.9 400 73.2
FAN05G5067 Fragaria x ananassa HOM05D006660 ORTHO05D008184 1.3e-166 590.1 404 74.5
FvH4_6g41550 Fragaria vesca HOM05D006660 ORTHO05D008184 2.2e-166 589.3 405 74.3
Ah.14g082930 Amaranthus hybridus HOM05D006660 ORTHO05D008184 4.8e-166 588.2 400 71.2
Ca_16352_v3 Cicer arietinum L. HOM05D006660 ORTHO05D008184 8.2e-166 587.4 405 74.1
Medtr3g082870 Medicago truncatula HOM05D006660 ORTHO05D008184 1.1e-165 587.0 406 73.6
Ciclev10014722m.g Citrus clementina HOM05D006660 ORTHO05D008184 1.4e-165 586.6 403 73.2
Migut.M00006 Erythranthe guttata HOM05D006660 ORTHO05D008184 1.6e-164 583.2 416 72.8
Cpa.g.sc132.76 Carica papaya HOM05D006660 ORTHO05D008184 2.6e-164 582.4 402 72.6
AL3G42350 Arabidopsis lyrata HOM05D006660 ORTHO05D008184 4.5e-164 581.6 399 72.9
AT2G04740 Arabidopsis thaliana HOM05D006660 ORTHO05D008184 2.9e-163 578.9 399 72.2
Carub.0003s2635 Capsella rubella HOM05D006660 ORTHO05D008184 3.8e-163 578.6 405 71.4
TPR.G22464 Trifolium pratense HOM05D006660 ORTHO05D008184 3.8e-163 578.6 419 71.1
arahy.Tifrunner.gnm1.ann1.7S53TL Arachis hypogaea HOM05D006660 ORTHO05D008184 8.5e-163 577.4 400 73.0
arahy.Tifrunner.gnm1.ann1.GN08CG Arachis hypogaea HOM05D006660 ORTHO05D008184 8.5e-163 577.4 400 73.0
Aqoxy1G02841 Aquilegia oxysepala HOM05D006660 ORTHO05D008184 1.1e-162 577.0 400 71.8
arahy.Tifrunner.gnm1.ann1.V90YU5 Arachis hypogaea HOM05D006660 ORTHO05D008184 4.2e-162 575.1 400 72.8
PSO541G2904 Papaver somniferum HOM05D006660 ORTHO05D008184 1.4e-160 570.1 403 69.2
Thhalv10002462m.g Eutrema salsugineum HOM05D006660 ORTHO05D008184 2.3e-160 569.3 404 71.5
PSO675G7408 Papaver somniferum HOM05D006660 ORTHO05D008184 2.3e-160 569.3 403 69.5
CARHR102690 Cardamine hirsuta HOM05D006660 ORTHO05D008184 3.0e-160 568.9 403 71.0
Sed0019714 Sechium edule HOM05D006660 ORTHO05D008184 6.7e-160 567.8 408 70.8
Atru.chr6.3318 Acer truncatum HOM05D006660 ORTHO05D008184 1.5e-159 566.6 397 72.8
Aa31sc53G10 Aethionema arabicum HOM05D006660 ORTHO05D008184 2.0e-159 566.2 400 70.5
EL10Ac3g05658 Beta vulgaris HOM05D006660 ORTHO05D008184 4.4e-159 565.1 404 69.8
Glyma.20G057100 Glycine max HOM05D006660 ORTHO05D008184 1.4e-157 560.1 405 70.1
Sp3g23370 Schrenkiella parvula HOM05D006660 ORTHO05D008184 2.4e-157 559.3 403 69.7
HPP92_017850 Vanilla planifolia HOM05D006660 ORTHO05D008184 4.5e-156 555.1 400 69.0
Lj6g0000837 Lotus japonicus HOM05D006660 ORTHO05D008184 1.0e-155 553.9 389 70.7
ClCG02G009540 Citrullus lanatus HOM05D006660 ORTHO05D008184 3.8e-155 552.0 425 67.8
CsaV3_2G034260 Cucumis sativus L. HOM05D006660 ORTHO05D008184 3.8e-155 552.0 399 69.9
MBI16_g31717_MAGBIO Magnolia biondii HOM05D006660 ORTHO05D008184 1.1e-154 550.4 399 69.4
MELO3C019360.2 Cucumis melo HOM05D006660 ORTHO05D008184 2.5e-154 549.3 405 69.1
BraA03t13574Z Brassica rapa HOM05D006660 ORTHO05D008184 7.2e-154 547.7 399 68.7
BolC3t17779H Brassica oleracea HOM05D006660 ORTHO05D008184 1.2e-153 547.0 399 68.4
A03p44410 Brassica napus HOM05D006660 ORTHO05D008184 3.6e-153 545.4 401 68.1
C03p55040 Brassica napus HOM05D006660 ORTHO05D008184 1.0e-152 543.9 399 67.9
BcaC01g03192 Brassica carinata HOM05D006660 ORTHO05D008184 1.8e-152 543.1 399 67.9
BcaB08g34485 Brassica carinata HOM05D006660 ORTHO05D008184 2.6e-151 539.3 399 67.4
FAN09G0285 Fragaria x ananassa HOM05D006660 ORTHO05D008184 4.1e-149 531.9 403 69.5
Lj8A132T54 Lonicera japonica HOM05D006660 ORTHO05D008184 1.0e-144 517.3 309 80.3
ECA234G1491 Erigeron canadensis HOM05D006660 ORTHO05D008184 7.3e-138 494.6 400 63.8
Zm00001eb281240 Zea mays HOM05D006660 ORTHO05D008184 1.0e-136 490.7 405 61.0
GSVIVG01030415001 Vitis vinifera HOM05D006660 ORTHO05D008184 1.5e-135 486.9 303 77.9
SEGI_29705 Sequoiadendron giganteum HOM05D006660 ORTHO05D008184 1.8e-133 479.9 468 54.7
Os06g0318200 Oryza sativa ssp. japonica HOM05D006660 ORTHO05D008184 1.1e-130 470.7 404 60.9
Mapoly0031s0110 Marchantia polymorpha HOM05D006660 ORTHO05D008184 2.5e-114 416.4 461 50.5
Pp3c5_19510 Physcomitrium patens HOM05D006660 ORTHO05D008184 6.2e-113 411.8 464 48.1
Pp3c5_19514 Physcomitrium patens HOM05D006660 ORTHO05D008184 6.2e-113 411.8 464 48.1
vmacro09381 Vaccinium macrocarpon HOM05D006660 ORTHO05D008184 1.2e-108 397.5 254 76.8
MD17G1109800 Malus domestica HOM05D006660 ORTHO05D008184 8.6e-107 391.3 242 78.9
SMO353G0185 Selaginella moellendorffii HOM05D006660 ORTHO05D008184 9.3e-101 371.3 330 57.9
Lalb_Chr24g0402731 Lupinus albus HOM05D006660 ORTHO05D008184 2.8e-97 359.8 254 70.5
VMungo1309G1541 Vigna mungo HOM05D006660 ORTHO05D008184 1.1e-90 337.8 248 67.7
CDE07G0400 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 3.4e-87 326.2 244 67.6
ATR0712G111 Amborella trichopoda HOM05D006660 ORTHO05D008184 3.2e-85 319.7 244 63.9
CBR_g47999 Chara braunii HOM05D006660 ORTHO05D008184 2.4e-72 276.9 276 47.8
AagrBONN_evm.TU.Sc2ySwM_344.2917 Anthoceros agrestis HOM05D006660 ORTHO05D008184 2.1e-68 263.8 401 40.6
AagrBONN_evm.TU.Sc2ySwM_228.2541 Anthoceros agrestis HOM05D006660 ORTHO05D008184 8.2e-65 251.9 413 38.3
Phvul.004G085870 Phaseolus vulgaris HOM05D006660 ORTHO05D008184 2.3e-59 233.8 136 81.6
ATR0712G102 Amborella trichopoda HOM05D006660 ORTHO05D008184 1.1e-58 231.5 163 70.6
CDE07G1994 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 1.1e-58 231.5 137 78.8
VMungo1309G0792 Vigna mungo HOM05D006660 ORTHO05D008184 3.1e-56 223.4 130 80.0
CDE04G2012 Ceratophyllum demersum HOM05D006660 ORTHO05D008184 1.2e-55 221.5 261 46.7
Lalb_Chr24g0402711 Lupinus albus HOM05D006660 ORTHO05D008184 2.4e-48 197.2 102 91.2
Hund08409 Selenicereus undatus HOM05D006660 ORTHO05D008184 2.7e-44 183.7 152 60.5
vmacro09380 Vaccinium macrocarpon HOM05D006660 ORTHO05D008184 5.0e-30 136.3 152 50.7
Lj8C132T7 Lonicera japonica HOM05D006660 ORTHO05D008184 5.7e-26 122.9 73 82.2
Cfa027280 Carpinus fangiana HOM05D006660 ORTHO05D008184 1.4e-11 75.1 260 25.8
GSVIVG01030416001 Vitis vinifera HOM05D006660 ORTHO05D008184 6.0e-07 59.7 36 77.8
Potri.009G156500 Populus trichocarpa HOM05D000563 ORTHO05D000536 1.0e-06 58.9 101 37.6
Sabra09G0122600 Salix brachista HOM05D000563 ORTHO05D000536 1.0e-06 58.9 91 38.5
Potri.001G184200 Populus trichocarpa HOM05D000563 ORTHO05D000536 2.3e-06 57.8 96 38.5
Os06g0668300 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 3.0e-06 57.4 93 33.3
Zm00001eb418740 Zea mays HOM05D000563 ORTHO05D442000 5.0e-06 56.6 92 34.8
Os08g0226800 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D000536 8.6e-06 55.8 83 37.3


User provided reference genes

Program Settings