Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 7.7e-64 246.9 118 100.0
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 1.2e-45 186.4 116 75.0
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 1.4e-44 183.0 109 77.1
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 3.1e-44 181.8 118 74.6
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 5.2e-44 181.0 118 71.2
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 2.0e-43 179.1 113 72.6
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 2.0e-43 179.1 116 72.4
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 2.0e-43 179.1 116 72.4
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 9.8e-43 176.8 119 73.9
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 1.1e-41 173.3 116 71.6
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 1.4e-41 172.9 118 69.5
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 1.9e-41 172.6 118 69.5
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 2.1e-40 169.1 119 67.2
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 2.7e-40 168.7 113 71.7
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 6.6e-39 164.1 117 65.0
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 8.6e-39 163.7 117 65.0
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 8.6e-39 163.7 113 69.9
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.5e-38 162.2 117 65.8
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 2.5e-38 162.2 117 64.1
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 5.6e-38 161.0 111 69.4
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 1.6e-37 159.5 113 66.4
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.6e-37 159.5 121 64.5
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.6e-37 159.5 121 64.5
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.6e-37 159.5 121 64.5
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 2.8e-37 158.7 110 70.0
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 3.6e-37 158.3 114 66.7
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 3.6e-37 158.3 118 62.7
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 4.7e-37 157.9 115 66.1
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 6.2e-37 157.5 113 64.6
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 1.8e-36 156.0 110 66.4
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 2.3e-36 155.6 116 59.5
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 2.3e-36 155.6 110 70.0
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 3.1e-36 155.2 117 59.0
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 3.1e-36 155.2 116 62.1
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 4.0e-36 154.8 114 67.5
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 5.2e-36 154.5 113 61.9
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 6.8e-36 154.1 121 62.0
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 1.2e-35 153.3 115 64.3
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 5.8e-35 151.0 95 72.6
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 7.6e-35 150.6 110 64.5
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 1.3e-34 149.8 110 64.5
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 1.3e-34 149.8 110 62.7
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 1.7e-34 149.4 115 61.7
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 2.2e-34 149.1 118 62.7
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 6.4e-34 147.5 113 61.1
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 6.4e-34 147.5 112 61.6
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 3.2e-33 145.2 112 64.3
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 9.2e-33 143.7 97 66.0
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 9.2e-33 143.7 100 65.0
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 9.2e-33 143.7 119 60.5
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 1.6e-32 142.9 107 60.7
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 1.6e-32 142.9 99 65.7
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 2.1e-32 142.5 94 69.1
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 2.1e-32 142.5 94 69.1
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 2.1e-32 142.5 111 60.4
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 4.6e-32 141.4 112 54.5
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 4.6e-32 141.4 101 62.4
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 6.0e-32 141.0 96 67.7
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 1.3e-31 139.8 100 67.0
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 1.3e-31 139.8 112 58.0
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 1.9e-30 136.0 112 57.1
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 2.5e-30 135.6 109 57.8
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 3.3e-30 135.2 132 49.2
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 4.3e-30 134.8 111 58.6
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 9.6e-30 133.7 113 51.3
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 1.4e-28 129.8 115 53.9
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 3.1e-28 128.6 113 52.2
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 3.1e-28 128.6 113 52.2
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 3.1e-28 128.6 112 50.9
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 3.1e-28 128.6 96 63.5
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 4.0e-28 128.3 113 51.3
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 6.9e-28 127.5 113 50.4
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 1.2e-27 126.7 113 52.2
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 1.2e-27 126.7 113 52.2
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 3.4e-27 125.2 113 49.6
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 7.6e-27 124.0 167 43.7
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 9.9e-27 123.6 92 55.4
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 2.2e-26 122.5 106 54.7
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 2.4e-25 119.0 97 58.8
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 4.6e-24 114.8 72 68.1
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 7.8e-24 114.0 92 55.4
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 7.8e-24 114.0 75 66.7
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 1.0e-23 113.6 97 52.6
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 1.0e-23 113.6 97 52.6
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 3.0e-23 112.1 112 47.3
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 3.9e-23 111.7 102 57.8
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 5.1e-23 111.3 115 47.0
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 5.1e-23 111.3 97 51.5
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 6.6e-23 110.9 92 59.8
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 1.9e-22 109.4 97 51.5
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 3.6e-21 105.1 113 43.4
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 4.8e-21 104.8 118 50.8
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 8.1e-21 104.0 93 51.6
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 1.8e-20 102.8 86 53.5
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 2.9e-18 95.5 101 46.5
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 4.9e-18 94.7 96 41.7
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 8.4e-18 94.0 112 38.4
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 2.5e-14 82.4 95 44.2
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 1.6e-13 79.7 106 40.6
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 9.9e-11 70.5 113 41.6
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 3.8e-10 68.6 73 45.2
MCO11G099 Micromonas commoda HOM05D007186 ORTHO05D008970 1.4e-09 66.6 105 32.4
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 5.5e-09 64.7 48 66.7
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 2.3e-07 59.3 48 66.7
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 2.3e-07 59.3 41 70.7
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 6.7e-07 57.8 44 65.9
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 1.1e-06 57.0 41 70.7


User provided reference genes

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