Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 6.2e-160 567.4 283 100.0
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 5.3e-127 458.0 281 79.4
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 9.1e-127 457.2 283 79.2
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 2.5e-124 449.1 276 79.3
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 7.2e-124 447.6 276 78.6
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 4.7e-123 444.9 278 79.5
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 1.4e-122 443.4 276 77.9
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 4.4e-121 438.3 279 77.1
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 4.4e-121 438.3 278 78.8
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 7.4e-121 437.6 277 76.9
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 2.2e-120 436.0 277 75.8
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 4.8e-120 434.9 276 75.7
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 8.2e-120 434.1 276 75.7
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 4.1e-119 431.8 279 74.9
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 4.1e-119 431.8 279 75.3
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 5.3e-119 431.4 278 75.5
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 5.3e-119 431.4 277 75.5
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 1.5e-118 429.9 279 74.6
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 3.4e-118 428.7 279 74.2
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 1.3e-117 426.8 279 74.9
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 2.9e-117 425.6 261 80.1
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 3.8e-117 425.2 283 74.6
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 6.5e-117 424.5 279 74.2
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 8.5e-117 424.1 279 73.8
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 1.1e-116 423.7 279 75.6
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 1.1e-116 423.7 277 74.7
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 1.1e-116 423.7 276 77.2
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 2.5e-116 422.5 277 74.4
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 2.5e-116 422.5 275 74.5
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 2.5e-116 422.5 283 73.5
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 4.2e-116 421.8 276 74.3
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 4.2e-116 421.8 276 74.3
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 5.5e-116 421.4 279 74.2
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 7.2e-116 421.0 258 80.2
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 1.2e-115 420.2 279 74.2
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 1.2e-115 420.2 279 72.4
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 1.2e-115 420.2 276 76.1
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 1.0e-114 417.2 277 73.6
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 1.4e-114 416.8 280 73.2
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 2.3e-114 416.0 277 75.1
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 3.9e-114 415.2 278 72.3
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 8.8e-114 414.1 279 73.1
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 2.0e-113 412.9 280 72.5
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 7.4e-113 411.0 278 73.4
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 9.7e-113 410.6 283 73.9
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 1.3e-112 410.2 275 73.8
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 2.8e-112 409.1 278 72.7
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 3.7e-112 408.7 279 72.8
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 6.3e-112 407.9 278 71.9
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 1.4e-111 406.8 279 71.3
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 4.1e-111 405.2 277 71.5
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 4.1e-111 405.2 277 71.5
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 1.6e-110 403.3 275 72.4
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 2.0e-110 402.9 276 72.5
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 3.5e-110 402.1 275 71.6
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 1.3e-109 400.2 283 72.1
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 1.1e-108 397.1 276 71.4
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 1.5e-108 396.7 275 71.6
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 2.5e-108 396.0 281 70.1
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 1.6e-107 393.3 279 68.1
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 2.1e-107 392.9 340 60.9
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 3.6e-107 392.1 277 71.5
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 8.0e-107 391.0 277 71.1
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 4.0e-106 388.7 276 69.9
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.2e-105 387.1 273 69.6
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 1.5e-105 386.7 263 73.0
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 3.3e-105 385.6 279 69.5
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 1.7e-104 383.3 276 68.1
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 2.8e-104 382.5 278 68.3
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 6.3e-104 381.3 275 68.4
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 1.6e-102 376.7 277 67.5
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 2.0e-102 376.3 277 67.1
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 4.5e-102 375.2 277 68.2
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 1.0e-101 374.0 266 68.4
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 1.0e-101 374.0 276 67.0
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 2.2e-101 372.9 242 76.4
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 2.2e-101 372.9 279 68.8
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 2.9e-101 372.5 276 67.4
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 3.8e-101 372.1 277 65.7
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 5.0e-101 371.7 276 66.7
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 8.5e-101 370.9 276 66.7
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 8.5e-101 370.9 279 67.7
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 1.1e-100 370.5 276 66.7
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 3.2e-100 369.0 278 69.1
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 4.2e-100 368.6 276 68.1
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 2.7e-99 365.9 277 66.4
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 1.8e-98 363.2 277 64.3
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 1.2e-97 360.5 286 63.6
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.5e-97 360.1 277 66.4
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.3e-96 357.1 277 66.1
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 1.1e-95 354.0 278 65.5
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 9.1e-95 350.9 280 66.1
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 5.9e-94 348.2 273 62.6
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 5.9e-94 348.2 259 67.2
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 1.5e-92 343.6 302 55.3
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 1.6e-91 340.1 285 62.8
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 1.1e-87 327.4 277 61.7
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 1.2e-83 313.9 187 80.7
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 1.2e-81 307.4 275 56.7
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 4.3e-76 288.9 275 60.0
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 6.6e-69 265.0 158 80.4
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 9.2e-55 218.0 238 53.4
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 6.2e-43 178.7 237 45.6
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 2.6e-41 173.3 142 62.0
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 1.7e-40 170.6 275 38.9
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 1.7e-40 170.6 136 62.5
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 3.5e-38 162.9 267 38.6
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 3.5e-38 162.9 274 35.8
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 1.0e-37 161.4 276 33.7
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 3.3e-36 156.4 261 33.7
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.6e-35 154.1 245 42.0
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 5.3e-34 149.1 278 30.6
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 1.5e-20 104.4 118 49.2
CDE05G2180 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 7.7e-17 92.0 75 64.0
MBI16_g27300_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 1.2e-14 84.7 144 40.3
Os04g0284100 Oryza sativa ssp. japonica HOM05D006939 ORTHO05D008616 1.3e-08 64.7 39 71.8


User provided reference genes

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