Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040430.1 Olea europaea HOM05D005724 ORTHO05D006636 0.0e+00 1157.5 651 100.0
Oeu026139.1 Olea europaea HOM05D005724 ORTHO05D006636 1.3e-189 667.2 522 76.1
Dinv40379 Davidia involucrata HOM05D005724 ORTHO05D006636 1.2e-174 617.5 668 55.5
CSS0043370 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 3.5e-174 615.9 659 58.9
Hma1.2p1_0023F.1_g015530 Hydrangea macrophylla HOM05D005724 ORTHO05D006636 1.9e-172 610.1 662 55.6
Actinidia03489 Actinidia chinensis HOM05D005724 ORTHO05D006636 1.5e-169 600.5 663 55.8
MSTRG.1463 Avicennia marina HOM05D005724 ORTHO05D006636 3.3e-164 582.8 618 57.1
vmacro00813 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 6.2e-163 578.6 659 53.9
TAR369G1103 Trochodendron aralioides HOM05D005724 ORTHO05D006636 6.4e-160 568.5 646 56.3
Migut.C01153 Erythranthe guttata HOM05D005724 ORTHO05D006636 6.6e-157 558.5 656 55.8
TAR623G1038 Trochodendron aralioides HOM05D005724 ORTHO05D006636 7.3e-156 555.1 651 55.8
SGA_v2.0_scaffold52G18986 Striga asiatica HOM05D005724 ORTHO05D006636 2.6e-153 546.6 655 54.0
unitig_46.g18493 Utricularia gibba HOM05D005724 ORTHO05D006636 9.9e-153 544.7 658 52.9
Cc10_g09550 Coffea canephora HOM05D005724 ORTHO05D006636 4.9e-152 542.3 666 55.3
CAN.G219.49 Capsicum annuum HOM05D005724 ORTHO05D006636 7.9e-150 535.0 659 53.4
TWI12G1283 Tripterygium wilfordii HOM05D005724 ORTHO05D006636 1.8e-149 533.9 676 49.7
CSS0028855 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 2.8e-147 526.6 518 59.3
RhsimUnG0095000 Rhododendron simsii HOM05D005724 ORTHO05D006636 5.3e-146 522.3 655 53.4
Peaxi162Scf00691g00055 Petunia axillaris HOM05D005724 ORTHO05D006636 4.5e-145 519.2 716 50.6
CiPaw.07G081600 Carya illinoinensis HOM05D005724 ORTHO05D006636 4.9e-144 515.8 661 51.7
Sc16g0010460 Simmondsia chinensis HOM05D005724 ORTHO05D006636 2.7e-142 510.0 662 52.3
Ciclev10011241m.g Citrus clementina HOM05D005724 ORTHO05D006636 2.5e-140 503.4 680 49.6
DCAR_014109 Daucus carota HOM05D005724 ORTHO05D006636 3.3e-140 503.1 652 49.1
PGR031G2108 Punica granatum HOM05D005724 ORTHO05D006636 1.6e-139 500.7 711 48.2
Lalb_Chr18g0058031 Lupinus albus HOM05D005724 ORTHO05D006636 3.7e-139 499.6 669 50.2
SalBow2G0175 Salvia bowleyana HOM05D005724 ORTHO05D006636 6.2e-139 498.8 655 49.9
Aqoxy1G00698 Aquilegia oxysepala HOM05D005724 ORTHO05D006636 1.4e-138 497.7 660 50.9
Sopen07g032510 Solanum pennellii HOM05D005724 ORTHO05D006636 3.1e-138 496.5 660 52.0
VMungo0540G1901 Vigna mungo HOM05D005724 ORTHO05D006636 2.2e-136 490.3 684 48.1
Manes.13G004400 Manihot esculenta HOM05D005724 ORTHO05D006636 6.5e-136 488.8 687 49.5
Solyc07g064350.3 Solanum lycopersicum HOM05D005724 ORTHO05D006636 8.4e-136 488.4 659 52.2
Nitab4.5_0003319g0010 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.4e-135 487.6 670 51.6
MBI13_g30854_MAGBIO Magnolia biondii HOM05D005724 ORTHO05D006636 1.9e-135 487.3 708 45.9
CsaV3_4G029120 Cucumis sativus L. HOM05D005724 ORTHO05D006636 4.2e-135 486.1 660 48.8
PGSC0003DMG400013918 Solanum tuberosum HOM05D005724 ORTHO05D006636 1.2e-134 484.6 596 52.7
Atru.chr12.1744 Acer truncatum HOM05D005724 ORTHO05D006636 1.1e-132 478.0 690 47.1
Nitab4.5_0000193g0130 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.2e-131 473.8 666 51.2
Glyma.15G131100 Glycine max HOM05D005724 ORTHO05D006636 3.1e-130 469.9 698 46.6
Ca_00849_v3 Cicer arietinum L. HOM05D005724 ORTHO05D006636 1.2e-129 468.0 604 49.0
Glyma.09G025000 Glycine max HOM05D005724 ORTHO05D006636 1.2e-129 468.0 697 48.2
Psat0s1379g0200 Pisum sativum HOM05D005724 ORTHO05D006636 1.5e-129 467.6 620 48.9
ATR0307G120 Amborella trichopoda HOM05D005724 ORTHO05D006636 1.0e-128 464.9 665 46.6
Lj6g0014403 Lotus japonicus HOM05D005724 ORTHO05D006636 1.0e-128 464.9 693 45.9
Thecc.05G190100 Theobroma cacao HOM05D005724 ORTHO05D006636 2.2e-128 463.8 708 47.3
Sed0018672 Sechium edule HOM05D005724 ORTHO05D006636 8.5e-128 461.8 681 46.7
Lsat_1_v5_gn_4_15540 Lactuca sativa HOM05D005724 ORTHO05D006636 9.3e-127 458.4 652 48.0
Sabra01G0096300 Salix brachista HOM05D005724 ORTHO05D006636 1.4e-125 454.5 652 48.0
arahy.Tifrunner.gnm1.ann1.EBNE7V Arachis hypogaea HOM05D005724 ORTHO05D006636 9.7e-124 448.4 697 44.6
Phvul.006G127600 Phaseolus vulgaris HOM05D005724 ORTHO05D006636 4.8e-123 446.0 697 44.0
arahy.Tifrunner.gnm1.ann1.GIZW0B Arachis hypogaea HOM05D005724 ORTHO05D006636 1.1e-122 444.9 694 44.1
HanXRQChr16g0529541 Helianthus annuus HOM05D005724 ORTHO05D006636 1.1e-122 444.9 654 49.1
Eucgr.H01410 Eucalyptus grandis HOM05D005724 ORTHO05D006636 1.8e-122 444.1 678 46.5
COL.COLO4_36609 Corchorus olitorius HOM05D005724 ORTHO05D006636 2.4e-122 443.7 666 47.9
Cfa006250 Carpinus fangiana HOM05D005724 ORTHO05D006636 1.2e-118 431.4 676 44.1
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 1.4e-117 427.9 656 46.5
Potri.001G125200 Populus trichocarpa HOM05D005724 ORTHO05D006636 8.8e-117 425.2 654 46.2
CANSAT35G0128 Cannabis sativa HOM05D005724 ORTHO05D006636 1.1e-116 424.9 668 46.9
Ah.06g195410 Amaranthus hybridus HOM05D005724 ORTHO05D006636 5.7e-116 422.5 660 47.6
Medtr2g030390 Medicago truncatula HOM05D005724 ORTHO05D006636 5.7e-116 422.5 684 46.1
ECA234G3960 Erigeron canadensis HOM05D005724 ORTHO05D006636 4.8e-115 419.5 681 46.5
TPR.G26364 Trifolium pratense HOM05D005724 ORTHO05D006636 6.3e-115 419.1 635 46.6
Nitab4.5_0001290g0080 Nicotiana tabacum HOM05D005724 ORTHO05D006636 8.2e-115 418.7 640 48.3
Haze_04583 Corylus avellana HOM05D005724 ORTHO05D006636 1.4e-114 417.9 683 43.9
Gohir.D08G247200 Gossypium hirsutum HOM05D005724 ORTHO05D006636 1.4e-114 417.9 698 44.4
Gorai.004G263700 Gossypium raimondii HOM05D005724 ORTHO05D006636 1.8e-114 417.5 694 44.5
ClCG09G009940 Citrullus lanatus HOM05D005724 ORTHO05D006636 2.9e-112 410.2 652 44.9
QL03p046485 Quercus lobata HOM05D005724 ORTHO05D006636 4.7e-110 402.9 670 46.3
Duzib168G0454 Durio zibethinus HOM05D005724 ORTHO05D006636 3.0e-109 400.2 696 44.8
Gohir.A08G226800 Gossypium hirsutum HOM05D005724 ORTHO05D006636 3.9e-109 399.8 705 42.1
vmacro22819 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 6.7e-109 399.1 648 45.1
Lj2C388T1 Lonicera japonica HOM05D005724 ORTHO05D006636 2.2e-107 394.0 645 45.7
Nn2g11375 Nelumbo nucifera HOM05D005724 ORTHO05D006636 5.0e-104 382.9 548 48.2
Aa31LG8G10800 Aethionema arabicum HOM05D005724 ORTHO05D006636 5.5e-103 379.4 593 45.4
Carub.0003s2445 Capsella rubella HOM05D005724 ORTHO05D006636 3.6e-102 376.7 659 42.6
QL10p055615 Quercus lobata HOM05D005724 ORTHO05D006636 4.0e-101 373.2 664 44.7
THA.LOC104821618 Tarenaya hassleriana HOM05D005724 ORTHO05D006636 2.0e-100 370.9 603 45.6
MELO3C000397.2 Cucumis melo HOM05D005724 ORTHO05D006636 4.4e-100 369.8 571 45.2
QL10p055704 Quercus lobata HOM05D005724 ORTHO05D006636 2.2e-99 367.5 669 43.3
RcHm_v2.0_Chr3g0447651 Rosa chinensis HOM05D005724 ORTHO05D006636 1.2e-97 361.7 725 41.5
CSS0001117 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 3.2e-95 353.6 325 61.5
MD12G1263700 Malus domestica HOM05D005724 ORTHO05D006636 4.0e-93 346.7 705 39.1
AL3G39270 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 3.4e-92 343.6 651 43.6
Prupe.6G362700 Prunus persica HOM05D005724 ORTHO05D006636 9.8e-92 342.0 668 40.3
FvH4_6g00350 Fragaria vesca HOM05D005724 ORTHO05D006636 1.7e-91 341.3 702 40.5
SHI13708 Sapria himalayana HOM05D005724 ORTHO05D006636 3.7e-91 340.1 668 40.4
CDE09G0189 Ceratophyllum demersum HOM05D005724 ORTHO05D006636 2.4e-90 337.4 484 46.5
AL8G20560 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 2.7e-89 334.0 659 40.8
AT3G24080 Arabidopsis thaliana HOM05D005724 ORTHO05D006636 2.7e-89 334.0 664 41.3
PSO541G5859 Papaver somniferum HOM05D005724 ORTHO05D006636 7.7e-89 332.4 687 39.3
SEGI_23235 Sequoiadendron giganteum HOM05D005724 ORTHO05D006636 3.8e-88 330.1 716 39.0
Nitab4.5_0013479g0020 Nicotiana tabacum HOM05D005724 ORTHO05D006636 3.3e-87 327.0 599 43.1
HPP92_010851 Vanilla planifolia HOM05D005724 ORTHO05D006636 9.8e-84 315.5 483 48.7
PSO133G0013 Papaver somniferum HOM05D005724 ORTHO05D006636 1.3e-83 315.1 684 39.2
Os05g0490000 Oryza sativa ssp. japonica HOM05D005724 ORTHO05D006636 8.3e-83 312.4 601 41.6
AagrBONN_evm.TU.Sc2ySwM_228.2542 Anthoceros agrestis HOM05D005724 ORTHO05D006636 7.8e-81 305.8 680 37.9
CARHR100150 Cardamine hirsuta HOM05D005724 ORTHO05D006636 2.3e-77 294.3 594 40.1
AUR62041171 Chenopodium quinoa HOM05D005724 ORTHO05D006636 3.4e-76 290.4 429 44.5
AUR62029295 Chenopodium quinoa HOM05D005724 ORTHO05D006636 1.2e-73 282.0 419 45.1
Zm00001eb227770 Zea mays HOM05D005724 ORTHO05D006636 1.0e-72 278.9 647 37.4
Mapoly0029s0120 Marchantia polymorpha HOM05D005724 ORTHO05D006636 3.0e-72 277.3 692 35.4
Mapoly0032s0003 Marchantia polymorpha HOM05D005724 ORTHO05D006636 1.2e-70 271.9 692 35.5
Pp3c2_10220 Physcomitrium patens HOM05D005724 ORTHO05D006636 1.4e-69 268.5 686 35.9
BcaB06g26592 Brassica carinata HOM05D005724 ORTHO05D006636 1.8e-69 268.1 635 35.7
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.6e-65 253.4 493 43.4
BolC7t41765H Brassica oleracea HOM05D005724 ORTHO05D006636 6.0e-65 253.1 640 36.7
A07p08250 Brassica napus HOM05D005724 ORTHO05D006636 2.5e-63 247.7 641 35.6
BraA07t28608Z Brassica rapa HOM05D005724 ORTHO05D006636 9.5e-63 245.7 645 35.3
C07p12790 Brassica napus HOM05D005724 ORTHO05D006636 1.2e-62 245.4 641 36.5
BcaC06g35627 Brassica carinata HOM05D005724 ORTHO05D006636 2.8e-62 244.2 641 36.5
Sp3g21860 Schrenkiella parvula HOM05D005724 ORTHO05D006636 4.7e-62 243.4 647 37.9
Peaxi162Scf00916g00115 Petunia axillaris HOM05D005724 ORTHO05D006636 1.7e-59 235.0 379 46.4
Nitab4.5_0005621g0050 Nicotiana tabacum HOM05D005724 ORTHO05D006636 2.2e-59 234.6 328 48.2
Dinv27342 Davidia involucrata HOM05D005724 ORTHO05D006636 1.9e-55 221.5 323 52.3
SMO118G0180 Selaginella moellendorffii HOM05D005724 ORTHO05D006636 1.4e-50 205.3 587 34.6
Dinv27343 Davidia involucrata HOM05D005724 ORTHO05D006636 7.8e-49 199.5 178 59.0
Glyma.13G144202 Glycine max HOM05D005724 ORTHO05D006636 1.3e-48 198.7 284 44.7
Cre10.g441450 Chlamydomonas reinhardtii HOM05D005724 ORTHO05D006636 1.9e-42 178.3 668 33.2
MCO14G354 Micromonas commoda HOM05D005724 ORTHO05D006636 3.5e-41 174.1 607 31.5
PRCOL_00003643 Prasinoderma coloniale HOM05D005724 ORTHO05D006636 6.9e-37 159.8 618 30.1
MSTRG.22873 Avicennia marina HOM05D005724 ORTHO05D006636 1.7e-35 155.2 182 51.1
Cpa.g.sc48.98 Carica papaya HOM05D005724 ORTHO05D006636 3.2e-34 151.0 241 51.5
CBR_g46717 Chara braunii HOM05D005724 ORTHO05D006636 1.3e-32 145.6 620 30.6
Psat1g166960 Pisum sativum HOM05D005724 ORTHO05D006636 4.8e-30 137.1 313 38.0
Peaxi162Scf00916g00131 Petunia axillaris HOM05D005724 ORTHO05D006636 4.6e-25 120.6 157 47.8
MD04G1246400 Malus domestica HOM05D005724 ORTHO05D006636 3.0e-24 117.9 135 51.9
AL8G20410 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 6.9e-21 106.7 155 44.5
AagrBONN_evm.TU.Sc2ySwM_344.5238 Anthoceros agrestis HOM05D005724 ORTHO05D006636 1.1e-18 99.4 536 25.7
MELO3C017820.2 Cucumis melo HOM05D005724 ORTHO05D006636 2.5e-18 98.2 106 56.6
MELO3C003738.2 Cucumis melo HOM05D005724 ORTHO05D006636 7.1e-18 96.7 106 55.7
Cfa025790 Carpinus fangiana HOM05D005724 ORTHO05D006636 4.6e-17 94.0 591 26.4
Nitab4.5_0005621g0090 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.1e-15 89.4 109 56.9
MD04G1246500 Malus domestica HOM05D005724 ORTHO05D006636 5.9e-12 77.0 129 43.4
Nitab4.5_0005621g0100 Nicotiana tabacum HOM05D005724 ORTHO05D006636 5.9e-12 77.0 135 43.7
PSO339G2657 Papaver somniferum HOM05D005724 ORTHO05D006636 2.2e-11 75.1 185 39.5


User provided reference genes

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