Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 1.0e-55 219.9 119 100.0
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 4.3e-30 134.8 93 73.1
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 4.8e-29 131.3 121 57.9
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 4.5e-27 124.8 117 55.6
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 8.4e-26 120.6 127 52.0
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 3.2e-25 118.6 117 57.3
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 4.2e-25 118.2 118 56.8
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 1.6e-24 116.3 117 55.6
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 2.1e-24 115.9 119 55.5
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 4.6e-24 114.8 118 57.6
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 7.9e-24 114.0 113 54.9
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 7.9e-24 114.0 118 53.4
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 7.9e-24 114.0 113 58.4
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 1.0e-23 113.6 110 60.9
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 1.3e-23 113.2 117 50.4
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 1.8e-23 112.8 117 50.4
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 3.0e-23 112.1 117 54.7
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 3.0e-23 112.1 118 53.4
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 6.7e-23 110.9 117 53.8
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 6.7e-23 110.9 117 54.7
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 6.7e-23 110.9 117 52.1
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 6.7e-23 110.9 117 56.4
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 8.7e-23 110.5 110 57.3
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 1.5e-22 109.8 117 53.0
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 3.3e-22 108.6 122 51.6
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 5.7e-22 107.8 117 52.1
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 5.7e-22 107.8 117 52.1
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 5.7e-22 107.8 117 50.4
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 7.4e-22 107.5 117 52.1
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 7.4e-22 107.5 113 55.8
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 7.4e-22 107.5 112 55.4
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 9.7e-22 107.1 117 52.1
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 9.7e-22 107.1 118 51.7
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 1.3e-21 106.7 117 51.3
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 1.3e-21 106.7 117 53.0
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 1.6e-21 106.3 110 56.4
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 4.8e-21 104.8 117 50.4
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 4.8e-21 104.8 117 50.4
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 4.8e-21 104.8 112 56.2
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 4.8e-21 104.8 118 49.2
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 4.8e-21 104.8 118 47.5
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 4.8e-21 104.8 110 53.6
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 6.3e-21 104.4 112 53.6
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 6.3e-21 104.4 117 50.4
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 6.3e-21 104.4 117 50.4
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 8.2e-21 104.0 117 51.3
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 8.2e-21 104.0 112 52.7
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 1.4e-20 103.2 117 52.1
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 1.8e-20 102.8 117 50.4
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 1.8e-20 102.8 112 47.3
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 2.4e-20 102.4 117 51.3
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 2.4e-20 102.4 117 48.7
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 3.1e-20 102.1 109 54.1
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 3.1e-20 102.1 118 50.8
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 3.1e-20 102.1 92 53.3
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 9.0e-20 100.5 109 53.2
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 9.0e-20 100.5 120 48.3
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 1.2e-19 100.1 109 51.4
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 1.5e-19 99.8 118 51.7
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 2.6e-19 99.0 119 48.7
BraA06t23667Z Brassica rapa HOM05D007246 ORTHO05D009066 2.6e-19 99.0 118 50.0
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 2.6e-19 99.0 116 50.0
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 2.6e-19 99.0 98 54.1
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 2.6e-19 99.0 101 56.4
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 3.4e-19 98.6 120 45.0
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 4.5e-19 98.2 83 59.0
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 4.5e-19 98.2 95 50.5
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 5.9e-19 97.8 109 54.1
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 7.7e-19 97.4 119 46.2
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 7.7e-19 97.4 118 46.6
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 1.0e-18 97.1 110 51.8
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 2.2e-18 95.9 118 50.0
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 2.2e-18 95.9 118 50.0
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 2.2e-18 95.9 96 50.0
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 2.2e-18 95.9 112 48.2
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 2.2e-18 95.9 82 61.0
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 6.5e-18 94.4 113 49.6
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 8.5e-18 94.0 113 49.6
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 8.5e-18 94.0 118 49.2
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 8.5e-18 94.0 94 52.1
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.1e-17 93.6 117 48.7
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 1.1e-17 93.6 117 47.0
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 1.9e-17 92.8 114 43.9
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 3.2e-17 92.0 119 44.5
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 3.2e-17 92.0 92 54.3
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 1.2e-16 90.1 119 43.7
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 2.7e-16 89.0 93 50.5
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 4.6e-16 88.2 97 49.5
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 1.0e-15 87.0 94 48.9
THA.LOC104821809 Tarenaya hassleriana HOM05D007246 ORTHO05D009066 1.0e-15 87.0 111 45.0
Carub.0007s3396 Capsella rubella HOM05D007246 ORTHO05D009066 1.7e-13 79.7 117 45.3
SGA_v2.0_scaffold52G18969 Striga asiatica HOM05D007246 ORTHO05D009066 3.7e-13 78.6 113 46.9
CARHR037830 Cardamine hirsuta HOM05D007246 ORTHO05D009066 2.4e-12 75.9 75 50.7
BcaB07g33783 Brassica carinata HOM05D007246 ORTHO05D009066 5.3e-12 74.7 108 46.3
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 5.3e-12 74.7 78 51.3
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 1.2e-11 73.6 93 46.2
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.5e-11 73.2 78 50.0
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.5e-11 73.2 78 50.0
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 2.0e-11 72.8 78 50.0
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 2.6e-11 72.4 76 52.6
Lsat_1_v5_gn_4_16480 Lactuca sativa HOM05D007246 ORTHO05D009066 1.4e-09 66.6 50 58.0
BcaB07g33731 Brassica carinata HOM05D007246 ORTHO05D009066 4.2e-09 65.1 76 48.7
BcaB07g33733 Brassica carinata HOM05D007246 ORTHO05D009066 4.2e-09 65.1 76 48.7
HPP92_002815 Vanilla planifolia HOM05D007246 ORTHO05D009066 4.7e-08 61.6 70 44.3
Os06g0149500 Oryza sativa ssp. japonica HOM05D007246 ORTHO05D009066 6.1e-08 61.2 86 43.0
FAN20G0163 Fragaria x ananassa HOM05D007246 ORTHO05D009066 6.7e-07 57.8 65 50.8
Peaxi162Scf17552g00001 Petunia axillaris HOM05D007246 ORTHO05D009066 4.4e-06 55.1 58 50.0


User provided reference genes

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