Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 3.9e-298 1027.3 503 100.0
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 2.1e-171 606.3 328 87.5
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 5.3e-170 601.7 328 86.0
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 7.1e-167 591.3 328 83.5
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 2.7e-166 589.3 328 83.2
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 2.7e-166 589.3 328 82.9
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 6.0e-166 588.2 329 83.0
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 1.1e-164 583.9 328 83.2
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.9e-164 583.2 328 82.0
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 3.3e-164 582.4 328 80.8
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 4.3e-164 582.0 326 81.3
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 4.3e-164 582.0 328 82.9
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 7.4e-164 581.3 328 82.0
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 8.2e-163 577.8 326 81.3
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 1.8e-162 576.6 350 76.6
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.8e-162 576.6 328 81.4
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 1.8e-162 576.6 326 80.7
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 4.1e-162 575.5 328 80.8
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 6.9e-162 574.7 327 80.7
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 6.9e-162 574.7 326 80.1
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 3.4e-161 572.4 328 79.9
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 4.5e-161 572.0 325 81.2
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 7.6e-161 571.2 325 81.2
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 1.7e-160 570.1 327 79.2
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 2.2e-160 569.7 328 79.9
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 2.9e-160 569.3 328 79.9
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 5.0e-160 568.5 327 78.9
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 5.0e-160 568.5 320 80.6
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 6.5e-160 568.2 317 83.0
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 6.5e-160 568.2 317 83.0
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 8.5e-160 567.8 328 79.0
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 1.4e-159 567.0 328 79.3
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 1.4e-159 567.0 328 80.5
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 2.5e-159 566.2 327 78.6
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 9.3e-159 564.3 328 78.0
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 2.1e-158 563.1 326 81.0
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 3.6e-158 562.4 328 77.1
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.0e-157 560.8 328 81.4
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.0e-157 560.8 329 77.5
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 1.8e-157 560.1 326 77.0
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 5.1e-157 558.5 327 77.4
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 8.7e-157 557.8 329 77.2
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 8.7e-157 557.8 326 78.2
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 1.9e-156 556.6 328 79.0
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 4.3e-156 555.4 328 77.4
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 9.7e-156 554.3 328 77.1
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 1.3e-155 553.9 328 80.8
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 1.6e-155 553.5 327 77.7
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 1.2e-153 547.4 328 78.0
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 5.9e-153 545.0 331 76.7
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.3e-152 543.9 329 77.2
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 2.9e-152 542.7 327 78.3
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 5.0e-152 542.0 330 76.7
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 8.5e-152 541.2 330 76.1
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 1.1e-151 540.8 328 75.6
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 1.4e-151 540.4 308 78.9
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 1.9e-151 540.0 330 76.7
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 2.5e-151 539.7 330 76.7
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 7.2e-151 538.1 330 77.3
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 9.4e-151 537.7 341 76.2
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 9.4e-151 537.7 336 74.1
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 1.2e-150 537.3 335 74.3
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 4.6e-150 535.4 330 76.4
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 6.1e-150 535.0 310 80.0
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 5.1e-149 531.9 346 73.4
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 6.7e-149 531.6 318 75.8
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 8.8e-149 531.2 320 76.2
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 8.8e-149 531.2 330 76.1
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 8.8e-149 531.2 327 74.3
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 2.0e-148 530.0 328 75.6
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 4.4e-148 528.9 341 73.3
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 2.8e-147 526.2 338 73.7
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 4.8e-147 525.4 328 77.1
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 1.1e-146 524.2 326 75.2
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 1.8e-146 523.5 326 74.8
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 1.5e-145 520.4 328 72.9
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 7.7e-145 518.1 326 72.7
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.0e-144 517.7 328 74.7
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 5.5e-143 511.9 312 77.6
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 4.7e-142 508.8 328 71.3
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 1.0e-141 507.7 313 75.1
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 2.3e-141 506.5 328 70.7
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 6.7e-141 505.0 328 70.7
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 8.8e-141 504.6 320 72.8
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 2.6e-140 503.1 328 69.2
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 4.4e-140 502.3 328 71.6
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 2.3e-133 479.9 328 70.1
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 1.6e-129 467.2 319 71.5
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 4.5e-129 465.7 330 64.8
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 1.3e-128 464.2 325 65.2
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 2.5e-127 459.9 253 81.8
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 4.4e-124 449.1 255 81.2
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 2.8e-123 446.4 328 62.8
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 4.8e-123 445.7 306 66.0
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 5.4e-122 442.2 277 73.3
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 1.2e-121 441.0 254 80.3
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 2.0e-121 440.3 309 65.7
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 2.3e-120 436.8 256 78.5
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 2.5e-119 433.3 328 64.6
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 1.2e-116 424.5 254 78.0
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 5.9e-113 412.1 309 60.2
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 1.3e-112 411.0 317 58.7
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 1.0e-109 401.4 241 75.9
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 1.4e-101 374.4 220 80.0
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 1.6e-97 360.9 198 84.3
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 2.8e-94 350.1 312 53.8
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 2.1e-78 297.4 166 77.1
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 3.7e-62 243.4 144 81.9
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 4.6e-57 226.5 132 80.3
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 4.6e-49 199.9 142 61.3
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 9.7e-47 192.2 312 38.1
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 8.2e-46 189.1 115 75.7
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 4.1e-45 186.8 288 37.8
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 2.0e-39 167.9 303 35.0
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.0e-31 141.4 111 66.7
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 9.7e-31 139.0 148 45.3
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 4.8e-30 136.7 133 54.9
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 1.8e-29 134.8 78 83.3
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 2.9e-27 127.5 82 65.9
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 5.5e-26 123.2 68 72.1
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 6.3e-22 109.8 58 86.2
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 3.1e-21 107.5 72 69.4
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.5e-15 88.6 69 59.4
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.5e-10 71.2 62 59.7
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 4.7e-09 67.0 202 28.2
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.2e-07 62.4 40 65.0
Rhsim11G0068700 Rhododendron simsii HOM05D006264 ORTHO05D007739 1.5e-07 62.0 39 79.5
Oeu017952.1 Olea europaea HOM05D006264 ORTHO05D291623 3.4e-07 60.8 87 43.7


User provided reference genes

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