Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 4.1e-90 334.7 171 100.0
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 1.0e-48 197.2 171 64.9
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 1.2e-44 183.7 175 60.0
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 5.8e-44 181.4 180 58.9
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 3.5e-41 172.2 173 61.3
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 2.3e-40 169.5 178 57.9
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 4.3e-39 165.2 177 56.5
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 1.8e-37 159.8 176 54.5
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 5.3e-37 158.3 178 54.5
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 4.4e-36 155.2 163 57.7
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 2.9e-35 152.5 171 53.8
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 2.4e-34 149.4 176 52.8
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 3.3e-31 139.0 169 54.4
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 5.6e-31 138.3 178 52.2
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 5.6e-31 138.3 167 51.5
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 7.3e-31 137.9 180 50.6
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 9.6e-31 137.5 164 48.8
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 3.6e-30 135.6 181 48.6
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 5.8e-28 128.3 176 50.0
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 7.6e-28 127.9 191 45.0
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 9.9e-28 127.5 168 47.6
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 2.9e-27 125.9 179 47.5
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 3.8e-27 125.6 184 47.3
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 4.9e-27 125.2 186 45.2
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 1.4e-26 123.6 144 51.4
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 4.2e-26 122.1 144 52.8
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 5.4e-26 121.7 183 46.4
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 6.0e-25 118.2 170 47.6
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 6.0e-25 118.2 191 42.9
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 1.0e-24 117.5 171 46.8
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.0e-24 117.5 173 49.1
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 1.3e-24 117.1 164 49.4
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 1.8e-24 116.7 174 46.6
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 3.0e-24 115.9 192 44.8
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 3.9e-24 115.5 164 45.1
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 6.7e-24 114.8 189 44.4
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 1.5e-23 113.6 193 44.6
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 5.6e-23 111.7 167 46.7
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 7.4e-23 111.3 171 46.2
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 2.8e-22 109.4 178 46.1
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 2.8e-22 109.4 181 43.6
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 4.8e-22 108.6 180 44.4
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 4.8e-22 108.6 187 43.3
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.4e-21 107.1 182 43.4
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 4.0e-21 105.5 178 43.8
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 5.3e-21 105.1 172 43.0
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 5.3e-21 105.1 174 43.7
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 6.9e-21 104.8 190 41.1
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 9.0e-21 104.4 168 43.5
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 9.0e-21 104.4 181 40.9
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 9.0e-21 104.4 140 48.6
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 1.5e-20 103.6 182 43.4
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 1.5e-20 103.6 166 46.4
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 2.0e-20 103.2 178 42.7
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 2.6e-20 102.8 175 44.0
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 2.6e-20 102.8 187 45.5
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 3.4e-20 102.4 110 54.5
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 3.4e-20 102.4 192 41.1
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 4.5e-20 102.1 116 52.6
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 5.8e-20 101.7 129 48.8
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 7.6e-20 101.3 179 39.7
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 1.7e-19 100.1 177 41.8
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 2.2e-19 99.8 186 40.3
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 2.2e-19 99.8 183 42.1
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 3.8e-19 99.0 178 42.7
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 6.5e-19 98.2 116 50.9
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 8.4e-19 97.8 121 50.4
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 8.4e-19 97.8 142 44.4
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 1.1e-18 97.4 183 42.6
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 3.2e-18 95.9 182 40.7
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 4.2e-18 95.5 172 40.7
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 4.6e-17 92.0 202 43.1
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 4.6e-17 92.0 171 42.1
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 7.9e-17 91.3 196 42.3
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 1.0e-16 90.9 178 39.9
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 1.0e-16 90.9 197 40.6
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 1.0e-16 90.9 176 39.2
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 1.8e-16 90.1 185 40.5
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 3.9e-16 89.0 179 40.2
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 3.9e-16 89.0 182 39.6
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 6.7e-16 88.2 173 38.7
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 6.7e-16 88.2 177 39.5
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.5e-15 87.0 116 48.3
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 1.5e-15 87.0 176 38.6
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 1.9e-15 86.7 179 37.4
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 4.3e-15 85.5 173 38.7
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 4.3e-15 85.5 173 38.7
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 5.7e-15 85.1 185 40.0
PGR102G2442 Punica granatum HOM05D006672 ORTHO05D007769 5.7e-15 85.1 176 39.8
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 7.4e-15 84.7 116 47.4
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 7.4e-15 84.7 104 54.8
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 9.6e-15 84.3 116 47.4
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 2.1e-14 83.2 183 38.3
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.8e-14 82.8 102 47.1
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 2.8e-14 82.8 88 51.1
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 3.7e-14 82.4 88 51.1
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 4.8e-14 82.0 101 48.5
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 1.8e-13 80.1 174 38.5
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 3.1e-13 79.3 168 39.3
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 5.3e-13 78.6 96 52.1
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 2.0e-12 76.6 160 43.1
ATR0829G196 Amborella trichopoda HOM05D006672 ORTHO05D007769 7.6e-12 74.7 143 41.3
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 7.6e-12 74.7 123 41.5
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 3.8e-11 72.4 103 46.6
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 3.8e-11 72.4 100 52.0
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 3.8e-11 72.4 107 46.7
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 8.4e-11 71.2 65 60.0
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 8.4e-11 71.2 175 34.9
SGA_v2.0_scaffold5G02564 Striga asiatica HOM05D000085 ORTHO05D000274 1.4e-10 70.5 141 39.0
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 7.1e-10 68.2 73 47.9
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 2.7e-09 66.2 163 37.4
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 2.7e-09 66.2 140 38.6
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 4.6e-09 65.5 116 42.2
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 6.1e-09 65.1 138 39.1
Nitab4.5_0002600g0060 Nicotiana tabacum HOM05D006672 ORTHO05D007769 7.9e-09 64.7 99 46.5
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 1.8e-08 63.5 70 55.7
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 5.1e-08 62.0 57 59.6
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 8.7e-08 61.2 174 32.8
Lsat_1_v5_gn_4_162060 Lactuca sativa HOM05D006672 ORTHO05D007769 3.3e-07 59.3 52 61.5
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 9.7e-07 57.8 35 82.9
Os09g0344700 Oryza sativa ssp. japonica HOM05D006672 ORTHO05D007769 3.7e-06 55.8 34 76.5
Sc12g0009390 Simmondsia chinensis HOM05D006672 ORTHO05D007769 4.8e-06 55.5 81 45.7
AagrBONN_evm.TU.Sc2ySwM_362.2137 Anthoceros agrestis HOM05D006672 ORTHO05D007769 8.2e-06 54.7 167 31.7


User provided reference genes

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