Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040360.1 Olea europaea HOM05D004680 ORTHO05D011268 4.9e-193 677.6 327 100.0
Nitab4.5_0000351g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 3.0e-49 199.9 127 73.2
Cc04_g02880 Coffea canephora HOM05D004680 ORTHO05D005939 3.9e-49 199.5 127 74.0
Nitab4.5_0009963g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 3.9e-49 199.5 127 74.0
Peaxi162Scf00015g00135 Petunia axillaris HOM05D004680 ORTHO05D005939 3.9e-49 199.5 127 74.0
MSTRG.22656 Avicennia marina HOM05D004680 ORTHO05D005939 6.7e-49 198.7 127 73.2
Migut.D01009 Erythranthe guttata HOM05D004680 ORTHO05D005939 6.7e-49 198.7 127 73.2
Nitab4.5_0006985g0040 Nicotiana tabacum HOM05D004680 ORTHO05D005939 6.7e-49 198.7 127 74.0
TAR383G0102 Trochodendron aralioides HOM05D004680 ORTHO05D005939 8.8e-49 198.4 127 72.4
Nn2g11656 Nelumbo nucifera HOM05D004680 ORTHO05D005939 2.0e-48 197.2 127 74.0
Nitab4.5_0011578g0010 Nicotiana tabacum HOM05D004680 ORTHO05D005939 2.0e-48 197.2 127 73.2
SGA_v2.0_scaffold69G23355 Striga asiatica HOM05D004680 ORTHO05D005939 2.0e-48 197.2 127 73.2
vmacro18875 Vaccinium macrocarpon HOM05D004680 ORTHO05D005939 2.0e-48 197.2 127 73.2
SalBow2G2497 Salvia bowleyana HOM05D004680 ORTHO05D005939 3.3e-48 196.4 127 72.4
Solyc03g120490.3 Solanum lycopersicum HOM05D004680 ORTHO05D005939 3.3e-48 196.4 127 72.4
Sopen03g039370 Solanum pennellii HOM05D004680 ORTHO05D005939 3.3e-48 196.4 127 72.4
Peaxi162Scf00207g01238 Petunia axillaris HOM05D004680 ORTHO05D005939 4.3e-48 196.1 127 72.4
Migut.I00930 Erythranthe guttata HOM05D004680 ORTHO05D005939 9.7e-48 194.9 127 71.7
Dinv30468 Davidia involucrata HOM05D004680 ORTHO05D005939 1.3e-47 194.5 127 71.7
DCAR_023071 Daucus carota HOM05D004680 ORTHO05D005939 1.7e-47 194.1 127 70.9
PGSC0003DMG400002632 Solanum tuberosum HOM05D004680 ORTHO05D005939 1.7e-47 194.1 127 71.7
QL05p021321 Quercus lobata HOM05D004680 ORTHO05D005939 2.2e-47 193.7 127 70.9
Rhsim08G0225100 Rhododendron simsii HOM05D004680 ORTHO05D005939 3.7e-47 193.0 127 71.7
Sc12g0009530 Simmondsia chinensis HOM05D004680 ORTHO05D005939 3.7e-47 193.0 127 71.7
TWI75G1773 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 4.8e-47 192.6 127 70.9
Actinidia32715 Actinidia chinensis HOM05D004680 ORTHO05D005939 6.3e-47 192.2 127 71.7
MSTRG.9470 Avicennia marina HOM05D004680 ORTHO05D005939 8.2e-47 191.8 127 70.9
SalBow7G2677 Salvia bowleyana HOM05D004680 ORTHO05D005939 8.2e-47 191.8 127 71.7
CSS0028346 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 1.1e-46 191.4 127 71.7
SGA_v2.0_scaffold4G02014 Striga asiatica HOM05D004680 ORTHO05D005939 1.1e-46 191.4 127 70.9
CSS0039709 Camellia sinensis var. sinensis HOM05D004680 ORTHO05D005939 1.8e-46 190.7 127 69.3
COL.COLO4_30464 Corchorus olitorius HOM05D004680 ORTHO05D005939 1.8e-46 190.7 127 70.1
PSO566G0328 Papaver somniferum HOM05D004680 ORTHO05D005939 1.8e-46 190.7 127 70.9
Actinidia21693 Actinidia chinensis HOM05D004680 ORTHO05D005939 2.4e-46 190.3 127 70.9
Glyma.13G356500 Glycine max HOM05D004680 ORTHO05D005939 2.4e-46 190.3 127 69.3
Cfa002107 Carpinus fangiana HOM05D004680 ORTHO05D005939 3.1e-46 189.9 127 69.3
Gohir.A05G127800 Gossypium hirsutum HOM05D004680 ORTHO05D005939 3.1e-46 189.9 126 69.8
Gohir.A10G067300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 3.1e-46 189.9 126 69.8
Gohir.D10G069100 Gossypium hirsutum HOM05D004680 ORTHO05D005939 3.1e-46 189.9 126 69.8
Gorai.009G136000 Gossypium raimondii HOM05D004680 ORTHO05D005939 3.1e-46 189.9 126 69.8
Gorai.011G073000 Gossypium raimondii HOM05D004680 ORTHO05D005939 3.1e-46 189.9 126 69.8
Nn3g18134 Nelumbo nucifera HOM05D004680 ORTHO05D005939 3.1e-46 189.9 127 71.7
Glyma.15G017600 Glycine max HOM05D004680 ORTHO05D005939 4.1e-46 189.5 127 69.3
Cpa.g.sc109.43 Carica papaya HOM05D004680 ORTHO05D005939 5.3e-46 189.1 127 68.5
Thecc.06G095100 Theobroma cacao HOM05D004680 ORTHO05D005939 5.3e-46 189.1 126 69.8
ATR0315G163 Amborella trichopoda HOM05D004680 ORTHO05D005939 6.9e-46 188.7 127 70.1
Psat5g297320 Pisum sativum HOM05D004680 ORTHO05D005939 6.9e-46 188.7 127 68.5
Hund06644 Selenicereus undatus HOM05D004680 ORTHO05D005939 6.9e-46 188.7 127 70.1
TWI12G0154 Tripterygium wilfordii HOM05D004680 ORTHO05D005939 6.9e-46 188.7 127 70.1
AUR62016515 Chenopodium quinoa HOM05D004680 ORTHO05D005939 9.1e-46 188.3 127 68.5
Aqoxy7G01528 Aquilegia oxysepala HOM05D004680 ORTHO05D005939 1.2e-45 188.0 127 69.3
Hma1.2p1_1262F.1_g271230 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 1.2e-45 188.0 127 70.1
Medtr2g101480 Medicago truncatula HOM05D004680 ORTHO05D005939 1.2e-45 188.0 127 68.5
PSO782G2876 Papaver somniferum HOM05D004680 ORTHO05D005939 1.2e-45 188.0 127 70.1
TPR.G37217 Trifolium pratense HOM05D004680 ORTHO05D005939 1.2e-45 188.0 127 68.5
Aa31LG8G3340 Aethionema arabicum HOM05D004680 ORTHO05D005939 1.5e-45 187.6 127 66.9
CiPaw.01G234300 Carya illinoinensis HOM05D004680 ORTHO05D005939 1.5e-45 187.6 127 68.5
CiPaw.02G147900 Carya illinoinensis HOM05D004680 ORTHO05D005939 2.0e-45 187.2 127 68.5
ClCG07G013200 Citrullus lanatus HOM05D004680 ORTHO05D005939 2.0e-45 187.2 127 68.5
Duzib235G0372 Durio zibethinus HOM05D004680 ORTHO05D005939 2.0e-45 187.2 127 69.3
arahy.Tifrunner.gnm1.ann1.0TRA3C Arachis hypogaea HOM05D004680 ORTHO05D005939 2.6e-45 186.8 127 67.7
arahy.Tifrunner.gnm1.ann1.I8Y04W Arachis hypogaea HOM05D004680 ORTHO05D005939 2.6e-45 186.8 127 67.7
A01p37900 Brassica napus HOM05D004680 ORTHO05D005939 2.6e-45 186.8 128 68.0
C01p48080 Brassica napus HOM05D004680 ORTHO05D005939 2.6e-45 186.8 128 68.0
C05p50300 Brassica napus HOM05D004680 ORTHO05D005939 2.6e-45 186.8 128 68.0
BolC1t04776H Brassica oleracea HOM05D004680 ORTHO05D005939 2.6e-45 186.8 128 68.0
BolC5t33780H Brassica oleracea HOM05D004680 ORTHO05D005939 2.6e-45 186.8 128 68.0
BraA01t03850Z Brassica rapa HOM05D004680 ORTHO05D005939 2.6e-45 186.8 128 68.0
Duzib192G0285 Durio zibethinus HOM05D004680 ORTHO05D005939 3.4e-45 186.4 126 69.0
FAN09G3354 Fragaria x ananassa HOM05D004680 ORTHO05D005939 3.4e-45 186.4 127 67.7
Lj3g0026249 Lotus japonicus HOM05D004680 ORTHO05D005939 3.4e-45 186.4 127 67.7
Atru.BG.177.p Acer truncatum HOM05D004680 ORTHO05D005939 4.5e-45 186.0 127 70.1
AL3G28890 Arabidopsis lyrata HOM05D004680 ORTHO05D005939 4.5e-45 186.0 127 67.7
Carub.0003s1595 Capsella rubella HOM05D004680 ORTHO05D005939 4.5e-45 186.0 127 67.7
AUR62031868 Chenopodium quinoa HOM05D004680 ORTHO05D005939 4.5e-45 186.0 127 68.5
Sabra01G0153900 Salix brachista HOM05D004680 ORTHO05D005939 4.5e-45 186.0 127 69.3
CARHR091390 Cardamine hirsuta HOM05D004680 ORTHO05D005939 5.9e-45 185.7 127 67.7
Ca_01140_v3 Cicer arietinum L. HOM05D004680 ORTHO05D005939 5.9e-45 185.7 127 67.7
Ciclev10025565m.g Citrus clementina HOM05D004680 ORTHO05D005939 5.9e-45 185.7 127 68.5
Eucgr.F03051 Eucalyptus grandis HOM05D004680 ORTHO05D005939 5.9e-45 185.7 127 69.3
Potri.001G186200 Populus trichocarpa HOM05D004680 ORTHO05D005939 5.9e-45 185.7 127 69.3
EL10Ac9g22049 Beta vulgaris HOM05D004680 ORTHO05D005939 7.7e-45 185.3 126 68.3
BcaC09g48589 Brassica carinata HOM05D004680 ORTHO05D005939 7.7e-45 185.3 127 67.7
BraA05t22155Z Brassica rapa HOM05D004680 ORTHO05D005939 7.7e-45 185.3 128 67.2
MELO3C012983.2 Cucumis melo HOM05D004680 ORTHO05D005939 7.7e-45 185.3 127 67.7
Lalb_Chr24g0395991 Lupinus albus HOM05D004680 ORTHO05D005939 7.7e-45 185.3 127 68.5
QL11p016400 Quercus lobata HOM05D004680 ORTHO05D005939 7.7e-45 185.3 127 69.3
FvH4_6g31940 Fragaria vesca HOM05D004680 ORTHO05D005939 1.0e-44 184.9 127 66.9
Manes.11G036700 Manihot esculenta HOM05D004680 ORTHO05D005939 1.0e-44 184.9 127 67.7
A05p33300 Brassica napus HOM05D004680 ORTHO05D005939 1.3e-44 184.5 128 67.2
CsaV3_3G023810 Cucumis sativus L. HOM05D004680 ORTHO05D005939 1.3e-44 184.5 127 67.7
Thhalv10020703m.g Eutrema salsugineum HOM05D004680 ORTHO05D005939 1.3e-44 184.5 127 66.9
AT3G16200 Arabidopsis thaliana HOM05D004680 ORTHO05D005939 1.7e-44 184.1 127 66.9
THA.LOC104817975 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 1.7e-44 184.1 127 68.5
Lsat_1_v5_gn_4_101400 Lactuca sativa HOM05D004680 ORTHO05D005939 2.2e-44 183.7 127 66.9
Lalb_Chr14g0373141 Lupinus albus HOM05D004680 ORTHO05D005939 2.2e-44 183.7 127 67.7
Potri.003G051200 Populus trichocarpa HOM05D004680 ORTHO05D005939 2.2e-44 183.7 127 67.7
Sp3g14570 Schrenkiella parvula HOM05D004680 ORTHO05D005939 2.2e-44 183.7 127 66.1
THA.LOC104815523 Tarenaya hassleriana HOM05D004680 ORTHO05D005939 2.2e-44 183.7 127 68.5
FAN05G4921 Fragaria x ananassa HOM05D004680 ORTHO05D005939 2.9e-44 183.3 127 66.1
HanXRQChr02g0032341 Helianthus annuus HOM05D004680 ORTHO05D005939 3.8e-44 183.0 127 67.7
GSVIVG01017045001 Vitis vinifera HOM05D004680 ORTHO05D005939 3.8e-44 183.0 127 68.5
Ah.01g021760 Amaranthus hybridus HOM05D004680 ORTHO05D005939 5.0e-44 182.6 127 66.9
Sed0009248 Sechium edule HOM05D004680 ORTHO05D005939 5.0e-44 182.6 127 66.9
VMungo1080G0622 Vigna mungo HOM05D004680 ORTHO05D005939 5.0e-44 182.6 127 68.5
CDE02G3046 Ceratophyllum demersum HOM05D004680 ORTHO05D005939 6.5e-44 182.2 127 66.1
Phvul.005G169700 Phaseolus vulgaris HOM05D004680 ORTHO05D005939 6.5e-44 182.2 127 66.9
FAN14G5860 Fragaria x ananassa HOM05D004680 ORTHO05D005939 8.5e-44 181.8 127 65.4
Sabra03G0027900 Salix brachista HOM05D004680 ORTHO05D005939 1.4e-43 181.0 127 66.1
unitig_899.g14773 Utricularia gibba HOM05D004680 ORTHO05D005939 1.4e-43 181.0 126 68.3
MBI04_g14933_MAGBIO Magnolia biondii HOM05D004680 ORTHO05D005939 1.9e-43 180.6 127 67.7
ECA247G0440 Erigeron canadensis HOM05D004680 ORTHO05D005939 2.5e-43 180.3 127 66.9
Lsat_1_v5_gn_1_34800 Lactuca sativa HOM05D004680 ORTHO05D005939 3.2e-43 179.9 127 66.9
Lalb_Chr22g0351431 Lupinus albus HOM05D004680 ORTHO05D005939 3.2e-43 179.9 152 59.2
Sed0024237 Sechium edule HOM05D004680 ORTHO05D005939 3.2e-43 179.9 127 65.4
RcHm_v2.0_Chr2g0139361 Rosa chinensis HOM05D004680 ORTHO05D005939 4.2e-43 179.5 127 65.4
CANSAT56G3143 Cannabis sativa HOM05D004680 ORTHO05D005939 5.5e-43 179.1 127 66.1
Manes.04G131400 Manihot esculenta HOM05D004680 ORTHO05D005939 5.5e-43 179.1 127 66.1
Oeu050619.1 Olea europaea HOM05D004680 ORTHO05D005939 5.5e-43 179.1 194 51.0
PGR102G2014 Punica granatum HOM05D004680 ORTHO05D005939 5.5e-43 179.1 127 65.4
SHI25904 Sapria himalayana HOM05D004680 ORTHO05D005939 7.2e-43 178.7 127 64.6
Prupe.3G064100 Prunus persica HOM05D004680 ORTHO05D005939 1.2e-42 177.9 129 67.4
MD09G1207900 Malus domestica HOM05D004680 ORTHO05D005939 1.0e-41 174.9 127 65.4
HPP92_021671 Vanilla planifolia HOM05D004680 ORTHO05D005939 2.3e-41 173.7 127 65.4
MD17G1189000 Malus domestica HOM05D004680 ORTHO05D005939 8.8e-41 171.8 127 64.6
Oeu039446.1 Olea europaea HOM05D011860 ORTHO05D011268 7.4e-40 168.7 171 56.7
SEGI_20570 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 2.0e-37 160.6 127 59.8
AagrBONN_evm.TU.Sc2ySwM_369.193 Anthoceros agrestis HOM05D004680 ORTHO05D005939 7.2e-35 152.1 127 58.3
Oeu013049.1 Olea europaea HOM05D011860 ORTHO05D011268 1.4e-33 147.9 180 49.4
SMO147G0400 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 1.1e-32 144.8 127 55.9
Zm00001eb270670 Zea mays HOM05D004680 ORTHO05D005939 9.7e-32 141.7 127 55.9
Dinv38006 Davidia involucrata HOM05D004680 ORTHO05D005939 2.4e-30 137.1 83 77.1
SGA_v2.0_scaffold5G02541 Striga asiatica HOM05D004680 ORTHO05D005939 3.1e-30 136.7 127 56.7
Oeu016603.1 Olea europaea HOM05D011860 ORTHO05D011268 4.1e-30 136.3 164 45.7
Pp3c17_20690 Physcomitrium patens HOM05D004680 ORTHO05D005939 1.1e-27 128.3 135 46.7
Hma1.2p1_1617F.1_g293780 Hydrangea macrophylla HOM05D004680 ORTHO05D005939 5.5e-27 125.9 87 69.0
Haze_11589 Corylus avellana HOM05D004680 ORTHO05D005939 2.1e-26 124.0 87 65.5
SMO358G0106 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 5.2e-25 119.4 127 45.7
SMO077G0005 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 3.4e-24 116.7 127 46.5
Oeu050051.1 Olea europaea HOM05D011860 ORTHO05D011268 4.5e-21 106.3 151 43.7
SMO114G0076 Selaginella moellendorffii HOM05D004680 ORTHO05D005939 4.2e-19 99.8 127 39.4
SEGI_33813 Sequoiadendron giganteum HOM05D004680 ORTHO05D005939 5.5e-19 99.4 84 54.8
PGSC0003DMG400007734 Solanum tuberosum HOM05D004680 ORTHO05D005939 3.0e-17 93.6 64 65.6
HPP92_008142 Vanilla planifolia HOM05D004680 ORTHO05D005939 8.3e-15 85.5 65 61.5
Gohir.D05G132300 Gossypium hirsutum HOM05D004680 ORTHO05D005939 4.5e-13 79.7 41 85.4
Haze_16340 Corylus avellana HOM05D004680 ORTHO05D005939 7.7e-13 79.0 39 87.2
Sc12g0009700 Simmondsia chinensis HOM05D004680 ORTHO05D005939 7.7e-13 79.0 42 83.3
Oeu049966.1 Olea europaea HOM05D011860 ORTHO05D011268 2.9e-12 77.0 119 40.3
Oeu043780.1 Olea europaea HOM05D011860 ORTHO05D011268 6.6e-12 75.9 188 35.6
Oeu048190.1 Olea europaea HOM05D011860 ORTHO05D011268 2.5e-11 73.9 170 35.9
Solyc07g014600.2 Solanum lycopersicum HOM05D004680 ORTHO05D005939 1.6e-10 71.2 47 70.2
Oeu016460.1 Olea europaea HOM05D014089 ORTHO05D011268 2.8e-10 70.5 167 33.5
Oeu012880.1 Olea europaea HOM05D014089 ORTHO05D011268 1.0e-09 68.6 157 35.0
Zm00001eb389580 Zea mays HOM05D004680 ORTHO05D000383 6.8e-09 65.9 42 71.4
Oeu015619.1 Olea europaea HOM05D014089 ORTHO05D011268 2.0e-08 64.3 120 35.0
Oeu007613.1 Olea europaea HOM05D014089 ORTHO05D011268 5.7e-08 62.8 104 38.5
Oeu025196.1 Olea europaea HOM05D002938 ORTHO05D011268 3.7e-07 60.1 120 35.8
Oeu063940.2 Olea europaea HOM05D004680 ORTHO05D007319 3.2e-06 57.0 32 81.2


User provided reference genes

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