Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 2.9e-94 348.6 180 100.0
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 3.4e-63 245.4 182 70.9
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 2.2e-62 242.7 177 71.8
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 2.1e-60 236.1 179 71.5
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 6.1e-60 234.6 174 71.3
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 3.0e-59 232.3 174 70.7
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 3.0e-59 232.3 182 68.1
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 3.9e-59 231.9 182 67.0
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 8.8e-59 230.7 182 66.5
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 1.1e-58 230.3 182 67.6
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 5.7e-58 228.0 177 67.2
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 9.7e-58 227.3 177 67.8
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 1.3e-57 226.9 177 67.8
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 1.1e-56 223.8 182 65.4
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 1.2e-55 220.3 167 69.5
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 2.6e-55 219.2 181 63.5
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 1.3e-54 216.9 181 65.2
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 1.7e-54 216.5 181 62.4
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 3.8e-54 215.3 182 63.2
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 8.5e-54 214.2 181 62.4
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 1.9e-53 213.0 184 64.1
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 9.4e-53 210.7 183 61.2
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 1.6e-52 209.9 183 61.2
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 2.1e-52 209.5 184 62.5
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 3.6e-52 208.8 179 62.0
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 4.7e-52 208.4 183 62.8
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 4.7e-52 208.4 179 63.1
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 7.9e-52 207.6 183 60.7
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 7.9e-52 207.6 183 60.7
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 3.9e-51 205.3 183 60.7
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 5.2e-51 204.9 179 60.9
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 8.8e-51 204.1 169 63.9
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 1.5e-50 203.4 173 60.7
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 5.7e-50 201.4 180 58.9
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 1.3e-49 200.3 174 60.9
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 1.3e-49 200.3 177 61.0
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 2.8e-49 199.1 181 60.2
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 1.4e-48 196.8 182 59.3
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 3.1e-48 195.7 181 60.8
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 1.6e-47 193.4 181 60.8
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 1.6e-47 193.4 181 61.3
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 3.5e-47 192.2 183 56.8
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 4.5e-47 191.8 183 59.6
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 1.7e-46 189.9 183 55.7
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 3.8e-46 188.7 181 58.6
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 1.5e-45 186.8 178 56.2
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 1.9e-45 186.4 183 55.7
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 3.2e-45 185.7 172 57.0
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 3.2e-45 185.7 174 56.9
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 5.5e-45 184.9 174 56.9
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 7.2e-45 184.5 183 54.6
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 9.4e-45 184.1 182 55.5
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 1.2e-44 183.7 180 55.0
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 1.6e-44 183.3 169 56.8
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 1.6e-44 183.3 179 58.7
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 2.1e-44 183.0 181 56.4
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 2.7e-44 182.6 178 55.6
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 3.6e-44 182.2 174 57.5
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 1.0e-43 180.6 180 56.7
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 1.4e-43 180.3 184 52.7
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 1.8e-43 179.9 183 54.6
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 2.3e-43 179.5 184 54.3
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 8.8e-43 177.6 178 56.2
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 1.2e-42 177.2 183 54.6
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 2.6e-42 176.0 180 56.1
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 2.6e-42 176.0 182 53.8
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 4.4e-42 175.3 178 53.9
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 5.7e-42 174.9 182 56.0
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 9.7e-42 174.1 181 55.2
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.3e-41 173.7 177 53.1
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 1.3e-41 173.7 182 55.5
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 1.7e-41 173.3 170 56.5
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 2.8e-41 172.6 182 53.3
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 1.4e-40 170.2 182 52.2
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.8e-40 169.9 183 53.6
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 1.8e-40 169.9 183 53.6
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 1.8e-40 169.9 188 55.9
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 3.1e-40 169.1 180 51.1
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 4.1e-40 168.7 178 53.4
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 5.3e-40 168.3 180 50.0
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 9.1e-40 167.5 171 56.7
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 1.2e-39 167.2 177 53.7
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 2.0e-39 166.4 171 56.1
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 2.7e-39 166.0 174 52.9
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 2.7e-39 166.0 183 53.0
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 4.5e-39 165.2 177 54.2
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 4.5e-39 165.2 189 55.6
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 4.5e-39 165.2 176 54.0
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 7.7e-39 164.5 174 52.9
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 2.2e-38 162.9 176 54.5
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 2.2e-38 162.9 178 48.9
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 2.9e-38 162.5 174 54.6
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 3.8e-38 162.2 182 51.6
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 6.5e-38 161.4 177 51.4
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 1.1e-37 160.6 174 52.3
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 2.5e-37 159.5 174 52.3
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 3.2e-37 159.1 172 52.3
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 5.5e-37 158.3 170 53.5
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 7.2e-37 157.9 176 52.3
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 9.4e-37 157.5 180 47.2
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 1.6e-36 156.8 178 48.3
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 1.6e-36 156.8 180 49.4
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 2.7e-36 156.0 178 48.3
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 2.7e-36 156.0 178 48.3
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 2.7e-36 156.0 174 49.4
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 1.0e-35 154.1 178 47.8
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 3.0e-35 152.5 176 51.1
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 1.5e-34 150.2 117 63.2
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 2.0e-34 149.8 174 50.6
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 3.4e-34 149.1 178 46.6
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 3.4e-34 149.1 172 50.6
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 7.5e-34 147.9 179 50.3
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 1.7e-33 146.7 179 54.2
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 1.1e-32 144.1 181 45.3
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 1.1e-32 144.1 181 45.3
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 1.1e-32 144.1 181 45.3
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 1.1e-32 144.1 181 45.3
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 2.4e-32 142.9 181 43.6
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 4.1e-32 142.1 171 45.0
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 4.1e-32 142.1 174 48.3
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 5.4e-32 141.7 175 49.1
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 9.1e-32 141.0 175 50.3
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 2.7e-31 139.4 151 51.0
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 2.7e-31 139.4 177 48.6
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 3.5e-31 139.0 173 45.1
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 7.7e-31 137.9 172 48.8
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 1.7e-30 136.7 109 59.6
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 2.8e-28 129.4 114 64.0
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 6.3e-25 118.2 176 42.0
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 8.3e-17 91.3 188 30.9
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 1.1e-11 74.3 182 29.7
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 5.2e-11 72.0 193 29.0
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 5.8e-10 68.6 179 29.6


User provided reference genes

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