Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 7.9e-280 966.5 489 100.0
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 3.6e-200 701.8 459 80.8
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 5.1e-170 601.7 491 66.4
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 2.0e-166 589.7 491 65.8
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 1.0e-165 587.4 490 64.7
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 1.7e-165 586.6 492 66.5
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 2.2e-165 586.3 490 64.9
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 6.5e-165 584.7 492 64.0
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 9.4e-164 580.9 454 70.5
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 1.2e-163 580.5 492 63.4
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 1.4e-162 577.0 492 63.6
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 7.4e-161 571.2 490 63.3
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 9.7e-161 570.9 491 65.0
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 1.3e-160 570.5 491 63.3
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 1.7e-160 570.1 490 64.9
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 5.3e-159 565.1 544 58.1
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 1.2e-158 563.9 496 62.3
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 2.0e-158 563.1 492 64.2
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 2.6e-158 562.8 502 62.7
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 5.9e-158 561.6 502 63.3
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 5.9e-158 561.6 490 62.7
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 6.5e-157 558.1 494 63.0
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 1.5e-156 557.0 490 63.5
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 2.5e-156 556.2 491 62.9
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 3.2e-156 555.8 491 63.3
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 4.2e-156 555.4 498 62.2
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 1.2e-155 553.9 490 63.5
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 6.1e-155 551.6 490 61.2
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 7.5e-153 544.7 501 62.1
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 4.1e-151 538.9 533 57.0
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 5.3e-151 538.5 491 60.7
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.2e-150 537.3 491 60.1
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 3.5e-150 535.8 511 59.3
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 4.5e-150 535.4 491 59.9
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 5.9e-150 535.0 483 61.3
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 5.9e-150 535.0 489 59.3
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 1.3e-149 533.9 554 57.4
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.3e-149 533.9 491 59.7
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 3.8e-149 532.3 491 60.7
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 5.0e-149 531.9 512 59.4
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 1.5e-148 530.4 491 59.5
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.9e-148 530.0 491 59.1
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 4.2e-148 528.9 489 59.1
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 2.7e-147 526.2 486 60.9
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 1.0e-146 524.2 520 56.9
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 2.3e-146 523.1 491 59.3
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 2.3e-146 523.1 491 61.5
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 4.0e-146 522.3 491 58.7
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 4.0e-146 522.3 491 58.5
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 6.8e-146 521.5 489 58.7
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 1.5e-145 520.4 515 57.5
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 5.7e-145 518.5 493 60.4
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 7.5e-145 518.1 492 61.0
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 1.7e-144 516.9 493 59.0
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 2.2e-144 516.5 491 58.7
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 6.3e-144 515.0 490 58.4
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 1.1e-143 514.2 491 59.3
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 4.5e-142 508.8 493 57.8
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 1.7e-141 506.9 494 59.1
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 5.0e-141 505.4 494 59.5
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 3.6e-139 499.2 513 56.7
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 4.1e-135 485.7 536 52.8
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 2.9e-133 479.6 492 56.1
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 1.1e-132 477.6 491 56.8
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 9.5e-132 474.6 524 53.1
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 2.8e-131 473.0 522 52.7
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 1.3e-128 464.2 525 52.0
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 2.0e-126 456.8 451 58.8
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 1.3e-125 454.1 504 55.6
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 1.2e-123 447.6 494 53.6
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 2.8e-123 446.4 509 54.6
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 8.0e-123 444.9 540 51.9
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 1.4e-122 444.1 500 51.8
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 8.9e-122 441.4 499 52.9
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 4.4e-121 439.1 493 53.8
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 4.4e-121 439.1 493 53.8
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 7.5e-121 438.3 499 52.7
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 1.1e-119 434.5 501 53.1
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 1.9e-119 433.7 502 53.2
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 5.4e-119 432.2 558 50.2
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 9.2e-119 431.4 515 52.6
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 6.0e-118 428.7 500 52.6
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 1.7e-117 427.2 558 49.6
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 2.3e-117 426.8 499 51.9
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 5.0e-117 425.6 459 55.1
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 6.6e-117 425.2 436 56.7
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 1.1e-116 424.5 492 53.3
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 1.1e-114 417.9 390 61.3
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 6.8e-114 415.2 492 52.0
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 3.4e-113 412.9 511 51.3
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 6.4e-112 408.7 505 50.3
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 8.3e-112 408.3 509 49.7
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 7.1e-111 405.2 506 49.0
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 2.7e-110 403.3 377 60.5
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 4.6e-110 402.5 528 48.7
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 6.0e-110 402.1 558 46.6
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 3.0e-109 399.8 505 49.7
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 3.9e-109 399.4 374 59.9
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 1.9e-108 397.1 496 49.2
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 2.0e-105 387.1 577 45.4
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 3.4e-105 386.3 580 44.0
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 3.5e-102 376.3 328 64.0
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 1.7e-101 374.0 512 49.0
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 2.2e-96 357.1 536 44.4
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 9.3e-95 351.7 530 44.5
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 4.6e-94 349.4 321 60.1
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 9.9e-81 305.1 276 64.9
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 5.0e-64 249.6 350 44.3
Hma1.2p1_0055F.1_g031510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 2.7e-62 243.8 217 59.4
C02p35770 Brassica napus HOM05D005852 ORTHO05D006688 1.7e-56 224.6 237 55.7
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 1.7e-56 224.6 279 50.5
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 1.9e-55 221.1 284 47.9
C02p58000 Brassica napus HOM05D005852 ORTHO05D006688 2.5e-55 220.7 237 54.9
Nn3g21757 Nelumbo nucifera HOM05D005852 ORTHO05D006688 2.1e-54 217.6 190 61.1
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 1.8e-53 214.5 511 33.7
BolC2t11869H Brassica oleracea HOM05D005852 ORTHO05D006688 6.7e-53 212.6 237 54.0
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 2.8e-43 180.6 489 30.1
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 2.6e-41 174.1 369 36.9
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 1.9e-39 167.9 504 30.6
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 1.0e-37 162.2 495 32.5
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 8.8e-37 159.1 178 49.4
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 1.1e-31 142.1 521 29.4
SGA_v2.0_scaffold120G32887 Striga asiatica HOM05D005852 ORTHO05D006688 2.5e-31 141.0 165 50.9
Actinidia20978 Actinidia chinensis HOM05D005852 ORTHO05D006688 5.5e-31 139.8 138 58.0
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 8.8e-29 132.5 462 30.5
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 1.3e-27 128.6 502 31.1
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 2.8e-27 127.5 526 27.9
BcaNung00812 Brassica carinata HOM05D005852 ORTHO05D006688 7.7e-25 119.4 147 50.3
Nn3g21758 Nelumbo nucifera HOM05D005852 ORTHO05D006688 1.9e-23 114.8 116 50.9
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 1.0e-21 109.0 479 27.3
BolC5t33669H Brassica oleracea HOM05D005852 ORTHO05D006688 1.5e-15 88.6 82 61.0
Lsat_1_v5_gn_3_89981 Lactuca sativa HOM05D005852 ORTHO05D006688 2.9e-11 74.3 48 72.9
HPP92_012783 Vanilla planifolia HOM05D005852 ORTHO05D006688 3.0e-08 64.3 91 46.2


User provided reference genes

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