Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040075.1 Olea europaea HOM05D004305 ORTHO05D005159 3.3e-176 621.7 334 100.0
Oeu041117.1 Olea europaea HOM05D004305 ORTHO05D005159 3.3e-43 179.9 364 41.8
MSTRG.16299 Avicennia marina HOM05D004305 ORTHO05D005159 3.1e-41 173.3 368 40.8
Oeu060316.1 Olea europaea HOM05D004305 ORTHO05D005159 4.0e-41 172.9 336 40.8
MSTRG.7546 Avicennia marina HOM05D004305 ORTHO05D005159 3.9e-36 156.4 360 39.2
Migut.M01906 Erythranthe guttata HOM05D004305 ORTHO05D005159 2.8e-34 150.2 342 40.1
Lj1P1160T59 Lonicera japonica HOM05D004305 ORTHO05D005159 6.9e-33 145.6 358 38.5
Dinv06927 Davidia involucrata HOM05D004305 ORTHO05D005159 2.0e-32 144.1 371 36.4
Oeu015165.2 Olea europaea HOM05D004305 ORTHO05D005159 1.9e-30 137.5 363 38.6
Cc09_g07570 Coffea canephora HOM05D004305 ORTHO05D005159 6.0e-29 132.5 333 35.4
CSS0026993 Camellia sinensis var. sinensis HOM05D004305 ORTHO05D005159 7.9e-29 132.1 392 36.5
Peaxi162Scf00395g00054 Petunia axillaris HOM05D004305 ORTHO05D005159 2.1e-26 124.0 311 36.0
SGA_v2.0_scaffold1G00275 Striga asiatica HOM05D004305 ORTHO05D005159 1.8e-25 120.9 333 36.3
Nitab4.5_0004204g0010 Nicotiana tabacum HOM05D004305 ORTHO05D005159 6.9e-25 119.0 337 35.3
Sopen02g006550 Solanum pennellii HOM05D004305 ORTHO05D005159 1.0e-23 115.2 305 36.7
Nitab4.5_0000076g0140 Nicotiana tabacum HOM05D004305 ORTHO05D005159 3.8e-23 113.2 337 34.7
GSVIVG01021709001 Vitis vinifera HOM05D004305 ORTHO05D005159 4.9e-23 112.8 328 35.4
PGSC0003DMG400021011 Solanum tuberosum HOM05D004305 ORTHO05D005159 6.5e-23 112.5 318 35.5
Solyc02g070040.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 2.1e-21 107.5 197 41.1
Rhsim02G0163100 Rhododendron simsii HOM05D004305 ORTHO05D005159 3.5e-21 106.7 375 33.6
Solyc02g022920.1 Solanum lycopersicum HOM05D004305 ORTHO05D005159 4.6e-21 106.3 306 35.3
SGA_v2.0_scaffold223G42870 Striga asiatica HOM05D004305 ORTHO05D005159 7.9e-21 105.5 340 33.5
Sabra11G0141400 Salix brachista HOM05D004305 ORTHO05D005159 1.0e-20 105.1 342 35.1
Prupe.4G095400 Prunus persica HOM05D004305 ORTHO05D005159 1.3e-20 104.8 212 40.6
Cpa.g.c43226 Carica papaya HOM05D004305 ORTHO05D005159 5.1e-20 102.8 329 34.0
Sopen02g019200 Solanum pennellii HOM05D004305 ORTHO05D005159 5.1e-20 102.8 303 34.3
Nitab4.5_0001583g0210 Nicotiana tabacum HOM05D004305 ORTHO05D005159 6.7e-20 102.4 208 38.5
Actinidia13459 Actinidia chinensis HOM05D004305 ORTHO05D005159 1.1e-19 101.7 370 31.6
Ciclev10015182m.g Citrus clementina HOM05D004305 ORTHO05D005159 1.1e-19 101.7 367 33.5
Potri.001G464300 Populus trichocarpa HOM05D004305 ORTHO05D005159 1.1e-19 101.7 346 35.8
TWI15G0126 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 1.3e-18 98.2 316 33.9
Carub.0007s2055 Capsella rubella HOM05D004305 ORTHO05D005159 2.1e-18 97.4 327 34.3
A03p52530 Brassica napus HOM05D004305 ORTHO05D005159 2.8e-18 97.1 345 34.5
BraA03t14328Z Brassica rapa HOM05D004305 ORTHO05D005159 4.8e-18 96.3 345 34.8
BcaNung04140 Brassica carinata HOM05D004305 ORTHO05D005159 6.3e-18 95.9 325 34.2
CANSAT35G0942 Cannabis sativa HOM05D004305 ORTHO05D005159 8.2e-18 95.5 390 31.0
PGSC0003DMG400021114 Solanum tuberosum HOM05D004305 ORTHO05D005159 1.4e-17 94.7 308 33.8
Potri.011G162400 Populus trichocarpa HOM05D004305 ORTHO05D005159 1.8e-17 94.4 353 31.4
AT4G20880 Arabidopsis thaliana HOM05D004305 ORTHO05D005159 4.1e-17 93.2 325 34.5
BcaNung07356 Brassica carinata HOM05D004305 ORTHO05D005159 5.3e-17 92.8 337 33.2
Sabra16G0313900 Salix brachista HOM05D004305 ORTHO05D005159 5.3e-17 92.8 346 34.7
DCAR_003840 Daucus carota HOM05D004305 ORTHO05D005159 6.9e-17 92.4 345 32.8
PSO675G0053 Papaver somniferum HOM05D004305 ORTHO05D005159 1.2e-16 91.7 288 29.9
BcaB03g11678 Brassica carinata HOM05D004305 ORTHO05D005159 1.5e-16 91.3 330 34.5
Sabra16G0315300 Salix brachista HOM05D004305 ORTHO05D005159 2.0e-16 90.9 346 34.4
unitig_748.g8282 Utricularia gibba HOM05D004305 ORTHO05D005159 3.4e-16 90.1 321 29.3
MD05G1269300 Malus domestica HOM05D004305 ORTHO05D005159 5.9e-16 89.4 202 37.6
unitig_748.g7348 Utricularia gibba HOM05D004305 ORTHO05D005159 1.0e-15 88.6 169 40.2
Manes.14G124700 Manihot esculenta HOM05D004305 ORTHO05D005159 1.3e-15 88.2 370 33.2
FAN25G2552 Fragaria x ananassa HOM05D004305 ORTHO05D005159 2.2e-15 87.4 211 37.0
BolC3t20584H Brassica oleracea HOM05D004305 ORTHO05D005159 2.9e-15 87.0 320 35.3
MD10G1248100 Malus domestica HOM05D004305 ORTHO05D005159 2.9e-15 87.0 270 33.0
MBI02_g39880_MAGBIO Magnolia biondii HOM05D004305 ORTHO05D005159 6.5e-15 85.9 180 36.1
THA.LOC104806249 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 1.1e-14 85.1 306 33.0
FvH4_3g10700 Fragaria vesca HOM05D004305 ORTHO05D005159 1.4e-14 84.7 367 33.2
BcaNung05413 Brassica carinata HOM05D004305 ORTHO05D005159 3.2e-14 83.6 350 31.7
A01p12300 Brassica napus HOM05D004305 ORTHO05D005159 3.2e-14 83.6 317 33.1
C07p50970 Brassica napus HOM05D004305 ORTHO05D005159 4.2e-14 83.2 351 31.3
BolC7t45599H Brassica oleracea HOM05D004305 ORTHO05D005159 4.2e-14 83.2 350 31.7
BraA01t01174Z Brassica rapa HOM05D004305 ORTHO05D005159 4.2e-14 83.2 317 32.5
Eucgr.D00100 Eucalyptus grandis HOM05D004305 ORTHO05D005159 5.5e-14 82.8 342 31.3
CARHR227440 Cardamine hirsuta HOM05D004305 ORTHO05D005159 7.2e-14 82.4 326 32.2
HanXRQChr08g0237311 Helianthus annuus HOM05D004305 ORTHO05D005159 7.2e-14 82.4 336 28.9
ClCG03G008260 Citrullus lanatus HOM05D004305 ORTHO05D005159 9.3e-14 82.0 379 30.9
Nn1g03508 Nelumbo nucifera HOM05D004305 ORTHO05D005159 9.3e-14 82.0 382 28.0
Lsat_1_v5_gn_9_25860 Lactuca sativa HOM05D004305 ORTHO05D005159 1.2e-13 81.6 363 32.0
RcHm_v2.0_Chr5g0017411 Rosa chinensis HOM05D004305 ORTHO05D005159 1.2e-13 81.6 367 30.8
Aa31LG6G2950 Aethionema arabicum HOM05D004305 ORTHO05D005159 1.6e-13 81.3 334 31.4
BcaC01g00679 Brassica carinata HOM05D004305 ORTHO05D005159 2.1e-13 80.9 320 34.7
C01p14710 Brassica napus HOM05D004305 ORTHO05D005159 2.1e-13 80.9 328 32.3
C03p83040 Brassica napus HOM05D004305 ORTHO05D005159 2.1e-13 80.9 320 34.7
BolC1t01423H Brassica oleracea HOM05D004305 ORTHO05D005159 2.1e-13 80.9 328 32.3
Actinidia31373 Actinidia chinensis HOM05D004305 ORTHO05D005159 2.7e-13 80.5 343 31.5
FAN16G1832 Fragaria x ananassa HOM05D004305 ORTHO05D005159 3.6e-13 80.1 370 33.0
Manes.06G058700 Manihot esculenta HOM05D004305 ORTHO05D005159 3.6e-13 80.1 347 29.7
Sp7g18970 Schrenkiella parvula HOM05D004305 ORTHO05D005159 4.6e-13 79.7 335 31.0
MELO3C002832.2 Cucumis melo HOM05D004305 ORTHO05D005159 6.1e-13 79.3 348 29.9
FAN11G3528 Fragaria x ananassa HOM05D004305 ORTHO05D005159 1.0e-12 78.6 362 32.6
TWI38G0672 Tripterygium wilfordii HOM05D004305 ORTHO05D005159 1.8e-12 77.8 299 33.1
CsaV3_1G037140 Cucumis sativus L. HOM05D004305 ORTHO05D005159 3.0e-12 77.0 356 30.3
Thecc.06G003200 Theobroma cacao HOM05D004305 ORTHO05D005159 3.0e-12 77.0 348 31.6
unitig_32.g10874 Utricularia gibba HOM05D004305 ORTHO05D005159 8.7e-12 75.5 321 31.2
AL7G33270 Arabidopsis lyrata HOM05D004305 ORTHO05D005159 1.5e-11 74.7 329 30.4
Lj4g0027556 Lotus japonicus HOM05D004305 ORTHO05D005159 1.5e-11 74.7 338 27.8
FAN21G2878 Fragaria x ananassa HOM05D004305 ORTHO05D005159 2.5e-11 73.9 316 33.2
Sc03g0008520 Simmondsia chinensis HOM05D004305 ORTHO05D005159 3.3e-11 73.6 209 37.3
BcaC09g51296 Brassica carinata HOM05D004305 ORTHO05D005159 9.7e-11 72.0 317 30.3
Glyma.15G132400 Glycine max HOM05D004305 ORTHO05D005159 1.3e-10 71.6 310 28.7
VMungo0540G0062 Vigna mungo HOM05D004305 ORTHO05D005159 2.2e-10 70.9 347 30.3
CiPaw.09G142800 Carya illinoinensis HOM05D004305 ORTHO05D005159 2.8e-10 70.5 173 39.9
Duzib192G0088 Durio zibethinus HOM05D004305 ORTHO05D005159 6.3e-10 69.3 345 30.4
THA.LOC104812214 Tarenaya hassleriana HOM05D004305 ORTHO05D005159 6.3e-10 69.3 330 31.5
Atru.chr10.781 Acer truncatum HOM05D004305 ORTHO05D005159 8.2e-10 68.9 349 33.2
Actinidia32347 Actinidia chinensis HOM05D004305 ORTHO05D005159 1.1e-09 68.6 227 34.4
Haze_05867 Corylus avellana HOM05D004305 ORTHO05D005159 2.4e-09 67.4 317 31.9
Psat1g165840 Pisum sativum HOM05D004305 ORTHO05D005159 2.4e-09 67.4 338 30.8
Lalb_Chr07g0189031 Lupinus albus HOM05D004305 ORTHO05D005159 3.1e-09 67.0 358 29.3
Cfa000806 Carpinus fangiana HOM05D004305 ORTHO05D005159 5.3e-09 66.2 356 30.9
MELO3C007060.2 Cucumis melo HOM05D004305 ORTHO05D005159 6.9e-09 65.9 367 28.9
Nn1g07139 Nelumbo nucifera HOM05D004305 ORTHO05D005159 9.1e-09 65.5 172 32.6
A08p14960 Brassica napus HOM05D004305 ORTHO05D005159 1.2e-08 65.1 337 31.2
BraA08t33477Z Brassica rapa HOM05D004305 ORTHO05D005159 1.2e-08 65.1 337 31.2
Duzib235G0167 Durio zibethinus HOM05D004305 ORTHO05D005159 1.2e-08 65.1 341 30.8
Glyma.09G026200 Glycine max HOM05D004305 ORTHO05D005159 1.2e-08 65.1 321 30.8
Lalb_Chr18g0058121 Lupinus albus HOM05D004305 ORTHO05D005159 2.6e-08 63.9 315 30.5
unitig_32.g11679 Utricularia gibba HOM05D004305 ORTHO05D005159 2.6e-08 63.9 149 40.3
COL.COLO4_26846 Corchorus olitorius HOM05D004305 ORTHO05D005159 4.5e-08 63.2 282 30.1
Thhalv10025304m.g Eutrema salsugineum HOM05D004305 ORTHO05D005159 5.9e-08 62.8 334 29.3
Medtr2g031350 Medicago truncatula HOM05D004305 ORTHO05D005159 5.9e-08 62.8 349 28.1
Gohir.A06G119900 Gossypium hirsutum HOM05D004305 ORTHO05D005159 1.7e-07 61.2 340 29.4
Lj6g0010125 Lotus japonicus HOM05D004305 ORTHO05D005159 2.2e-07 60.8 338 29.3
QL05p063597 Quercus lobata HOM05D004305 ORTHO05D005159 2.2e-07 60.8 345 30.4
QL93p0201_0023 Quercus lobata HOM05D004305 ORTHO05D005159 2.2e-07 60.8 345 30.4
AUR62014849 Chenopodium quinoa HOM05D002349 ORTHO05D002464 6.5e-07 59.3 75 49.3
Gorai.010G144500 Gossypium raimondii HOM05D004305 ORTHO05D005159 6.5e-07 59.3 335 29.0
Nn2g11492 Nelumbo nucifera HOM05D004305 ORTHO05D005159 6.5e-07 59.3 65 47.7
ClCG01G025280 Citrullus lanatus HOM05D004305 ORTHO05D005159 8.5e-07 58.9 332 28.6
CDE02G2479 Ceratophyllum demersum HOM05D006189 ORTHO05D007765 1.9e-06 57.8 174 32.8
CsaV3_6G052500 Cucumis sativus L. HOM05D004305 ORTHO05D005159 1.9e-06 57.8 355 28.2
Gohir.D06G124500 Gossypium hirsutum HOM05D004305 ORTHO05D005159 2.5e-06 57.4 335 29.0
SHI24805 Sapria himalayana HOM05D004305 ORTHO05D005159 3.2e-06 57.0 68 48.5
A02p28380 Brassica napus HOM05D004305 ORTHO05D005159 7.2e-06 55.8 166 31.9
Carub.0008s0412 Capsella rubella HOM05D004305 ORTHO05D005159 7.2e-06 55.8 176 34.7
Phvul.006G126000 Phaseolus vulgaris HOM05D004305 ORTHO05D005159 7.2e-06 55.8 351 29.1
Medtr4g094532 Medicago truncatula HOM05D004305 ORTHO05D005159 9.4e-06 55.5 295 25.1
PGR083G0011 Punica granatum HOM05D004305 ORTHO05D005159 9.4e-06 55.5 337 27.6


User provided reference genes

Program Settings