Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040066.1 Olea europaea HOM05D003210 ORTHO05D000001 2.3e-59 232.6 180 100.0
Oeu017112.4 Olea europaea HOM05D000167 ORTHO05D000465 3.3e-42 175.6 176 65.3
Migut.H02282 Erythranthe guttata HOM05D003210 ORTHO05D000001 1.4e-32 143.7 178 64.0
Cc03_g12590 Coffea canephora HOM05D003210 ORTHO05D000001 2.8e-28 129.4 170 67.1
FAN03G0748 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.8e-27 126.7 171 38.6
CSS0000965 Camellia sinensis var. sinensis HOM05D003210 ORTHO05D000001 2.3e-27 126.3 179 62.6
FvH4_7g04271 Fragaria vesca HOM05D003210 ORTHO05D000001 2.3e-27 126.3 171 38.6
RcHm_v2.0_Chr1g0329241 Rosa chinensis HOM05D003210 ORTHO05D000001 3.7e-25 119.0 171 36.8
MD15G1441200 Malus domestica HOM05D003210 ORTHO05D000001 4.9e-25 118.6 171 36.8
Oeu017113.2 Olea europaea HOM05D000258 ORTHO05D000001 4.9e-25 118.6 71 78.9
CAN.G674.2 Capsicum annuum HOM05D003210 ORTHO05D000001 3.1e-24 115.9 177 48.0
MD08G1245900 Malus domestica HOM05D003210 ORTHO05D000001 2.0e-23 113.2 171 35.1
Peaxi162Scf00370g00062 Petunia axillaris HOM05D003210 ORTHO05D000001 2.7e-23 112.8 180 53.3
Manes.12G124600 Manihot esculenta HOM05D003210 ORTHO05D000001 5.9e-23 111.7 171 58.5
CsaV3_6G031450 Cucumis sativus L. HOM05D003210 ORTHO05D000001 7.8e-23 111.3 172 56.4
Nitab4.5_0002364g0030 Nicotiana tabacum HOM05D003210 ORTHO05D000001 1.3e-22 110.5 177 59.3
Potri.006G124900 Populus trichocarpa HOM05D003210 ORTHO05D000001 1.7e-22 110.2 178 57.3
PGSC0003DMG401028232 Solanum tuberosum HOM05D003210 ORTHO05D000001 1.7e-22 110.2 177 54.8
GSVIVG01038280001 Vitis vinifera HOM05D003210 ORTHO05D000001 2.9e-22 109.4 171 59.1
Cpa.g.sc10.84 Carica papaya HOM05D003210 ORTHO05D000001 3.8e-22 109.0 171 51.5
Gorai.008G093300 Gossypium raimondii HOM05D003210 ORTHO05D000001 5.0e-22 108.6 171 62.6
Nitab4.5_0000574g0030 Nicotiana tabacum HOM05D003210 ORTHO05D000001 5.0e-22 108.6 177 59.3
Prupe.1G583300 Prunus persica HOM05D003210 ORTHO05D000001 5.0e-22 108.6 171 45.6
Sabra06G0098600 Salix brachista HOM05D003210 ORTHO05D000001 8.6e-22 107.8 178 55.6
Sopen10g032390 Solanum pennellii HOM05D003210 ORTHO05D000001 8.6e-22 107.8 177 53.1
Solyc10g081880.3 Solanum lycopersicum HOM05D003210 ORTHO05D000001 1.1e-21 107.5 177 55.4
Gohir.A12G085200 Gossypium hirsutum HOM05D003210 ORTHO05D000001 2.5e-21 106.3 171 61.4
FvH4_2g11090 Fragaria vesca HOM05D003210 ORTHO05D000001 4.3e-21 105.5 171 32.7
FAN24G1052 Fragaria x ananassa HOM05D003210 ORTHO05D000001 4.3e-21 105.5 171 32.7
Phvul.008G101600 Phaseolus vulgaris HOM05D003210 ORTHO05D000001 5.6e-21 105.1 171 52.6
FAN26G1074 Fragaria x ananassa HOM05D003210 ORTHO05D000001 1.2e-20 104.0 172 31.4
Glyma.09G200200 Glycine max HOM05D003210 ORTHO05D000001 2.1e-20 103.2 170 48.2
MELO3C026530.2 Cucumis melo HOM05D003210 ORTHO05D000001 4.7e-20 102.1 168 60.7
FAN28G0230 Fragaria x ananassa HOM05D003210 ORTHO05D000001 6.1e-20 101.7 172 30.8
PGSC0003DMG400023572 Solanum tuberosum HOM05D003210 ORTHO05D000001 1.0e-19 100.9 177 59.9
Aqoxy6G00832 Aquilegia oxysepala HOM05D003210 ORTHO05D000001 1.8e-19 100.1 171 33.3
FvH4_1g06430 Fragaria vesca HOM05D003210 ORTHO05D000001 3.0e-19 99.4 172 30.2
FAN19G0968 Fragaria x ananassa HOM05D003210 ORTHO05D000001 3.0e-19 99.4 172 30.2
FAN20G1808 Fragaria x ananassa HOM05D003210 ORTHO05D000001 3.0e-19 99.4 171 33.3
AUR62039467 Chenopodium quinoa HOM05D003210 ORTHO05D000001 5.2e-19 98.6 178 29.2
MD11G1188000 Malus domestica HOM05D003210 ORTHO05D000001 1.2e-18 97.4 171 38.0
Lalb_Chr19g0125341 Lupinus albus HOM05D003210 ORTHO05D000001 2.0e-18 96.7 171 59.6
RcHm_v2.0_Chr2g0092171 Rosa chinensis HOM05D003210 ORTHO05D000001 4.4e-18 95.5 172 29.7
TWI53G0425 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 5.7e-18 95.1 171 43.3
SalBow3G1735 Salvia bowleyana HOM05D003210 ORTHO05D000001 7.5e-18 94.7 171 56.7
AUR62027713 Chenopodium quinoa HOM05D003210 ORTHO05D000001 9.8e-18 94.4 173 29.5
TWI74G0121 Tripterygium wilfordii HOM05D003210 ORTHO05D000001 1.3e-17 94.0 171 53.2
Prupe.4G256300 Prunus persica HOM05D003210 ORTHO05D000001 4.1e-16 89.0 168 29.8
Nitab4.5_0005257g0020 Nicotiana tabacum HOM05D003210 ORTHO05D000001 7.0e-16 88.2 177 49.2
Phvul.002G145400 Phaseolus vulgaris HOM05D003210 ORTHO05D000001 2.7e-15 86.3 170 47.1
SHI21874 Sapria himalayana HOM05D003210 ORTHO05D000001 2.7e-15 86.3 173 33.5
VMungo1215G2034 Vigna mungo HOM05D003210 ORTHO05D000001 2.7e-15 86.3 170 28.2
Psat3g169880 Pisum sativum HOM05D003210 ORTHO05D000001 3.5e-15 85.9 167 48.5
Gohir.D12G079600 Gossypium hirsutum HOM05D003210 ORTHO05D000001 1.3e-14 84.0 171 65.5
Lsat_1_v5_gn_7_6901 Lactuca sativa HOM05D003210 ORTHO05D000001 1.3e-14 84.0 169 53.3
HanXRQChr06g0169331 Helianthus annuus HOM05D003210 ORTHO05D000001 3.0e-14 82.8 171 53.8
HanXRQChr04g0122161 Helianthus annuus HOM05D003210 ORTHO05D000001 5.0e-14 82.0 175 48.6
AT5G65560 Arabidopsis thaliana HOM05D003210 ORTHO05D000001 1.1e-13 80.9 172 29.1
Eucgr.H02438 Eucalyptus grandis HOM05D003210 ORTHO05D000001 5.6e-13 78.6 171 56.1
AL8G43160 Arabidopsis lyrata HOM05D003210 ORTHO05D000001 9.5e-13 77.8 172 29.1
Sp2g28660 Schrenkiella parvula HOM05D003210 ORTHO05D000001 3.6e-12 75.9 172 26.2
VMungo1383G3073 Vigna mungo HOM05D003210 ORTHO05D000001 3.6e-12 75.9 150 54.7
Carub.0008s2641 Capsella rubella HOM05D003210 ORTHO05D000001 4.7e-12 75.5 172 29.7
SGA_v2.0_scaffold181G39736 Striga asiatica HOM05D003210 ORTHO05D000001 8.0e-12 74.7 47 72.3
Haze_03893 Corylus avellana HOM05D003210 ORTHO05D000001 1.1e-11 74.3 128 60.2
Dinv34734 Davidia involucrata HOM05D003210 ORTHO05D000001 1.4e-11 73.9 39 79.5
EL10Ac6g15188 Beta vulgaris HOM05D003210 ORTHO05D000001 2.3e-11 73.2 128 28.9
Thecc.01G191200 Theobroma cacao HOM05D003210 ORTHO05D000001 2.6e-10 69.7 164 38.4
AL7G34260 Arabidopsis lyrata HOM05D003210 ORTHO05D000001 3.4e-10 69.3 179 42.5
Lj3C22T6 Lonicera japonica HOM05D003210 ORTHO05D000001 4.4e-10 68.9 40 75.0
FAN26G0660 Fragaria x ananassa HOM05D000020 ORTHO05D000001 9.8e-10 67.8 149 36.2
TAR625G1193 Trochodendron aralioides HOM05D003210 ORTHO05D000001 1.3e-09 67.4 178 59.6
Ca_25227_v3 Cicer arietinum L. HOM05D003210 ORTHO05D000001 2.9e-09 66.2 169 53.3
TAR381G0732 Trochodendron aralioides HOM05D003210 ORTHO05D000001 1.4e-08 63.9 41 63.4
Glyma.01G021450 Glycine max HOM05D003210 ORTHO05D000001 3.2e-08 62.8 128 47.7
vmacro18279 Vaccinium macrocarpon HOM05D003210 ORTHO05D008377 3.2e-08 62.8 171 63.2
Prupe.3G201200 Prunus persica HOM05D003210 ORTHO05D000001 7.0e-08 61.6 176 23.9
Atru.chr4.1465 Acer truncatum HOM05D003210 ORTHO05D000001 9.2e-08 61.2 171 62.0
Ciclev10018770m.g Citrus clementina HOM05D003210 ORTHO05D000001 9.2e-08 61.2 175 60.6
Carub.0002s2422 Capsella rubella HOM05D003210 ORTHO05D000001 1.6e-07 60.5 171 52.6
ECA236G0103 Erigeron canadensis HOM05D003210 ORTHO05D000001 2.7e-07 59.7 44 56.8
MBI16_g31256_MAGBIO Magnolia biondii HOM05D003210 ORTHO05D000001 6.0e-07 58.5 41 58.5
Duzib264G1117 Durio zibethinus HOM05D003210 ORTHO05D000001 1.3e-06 57.4 38 65.8
Nitab4.5_0002165g0010 Nicotiana tabacum HOM05D003210 ORTHO05D000001 3.9e-06 55.8 44 54.5
Rhsim05G0168300 Rhododendron simsii HOM05D003210 ORTHO05D000001 3.9e-06 55.8 38 63.2
COL.COLO4_27373 Corchorus olitorius HOM05D003210 ORTHO05D000001 5.0e-06 55.5 38 65.8
PSO541G2059 Papaver somniferum HOM05D003210 ORTHO05D000001 5.0e-06 55.5 50 44.0
Thecc.01G088700 Theobroma cacao HOM05D003210 ORTHO05D000001 8.6e-06 54.7 37 62.2


User provided reference genes

Program Settings