Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040018.1 Olea europaea HOM05D000010 ORTHO05D000151 5.3e-72 274.2 138 100.0
Oeu051427.1 Olea europaea HOM05D000010 ORTHO05D000151 5.7e-50 201.1 141 76.6
Peaxi162Scf00998g00127 Petunia axillaris HOM05D000010 ORTHO05D000151 2.5e-21 105.9 143 51.0
Manes.03G114300 Manihot esculenta HOM05D000010 ORTHO05D000151 2.1e-20 102.8 167 43.1
Thecc.07G075700 Theobroma cacao HOM05D000010 ORTHO05D000151 1.3e-17 93.6 167 44.9
MSTRG.6847 Avicennia marina HOM05D000010 ORTHO05D000151 2.9e-17 92.4 168 44.6
Cc05_g12510 Coffea canephora HOM05D000010 ORTHO05D000151 6.4e-17 91.3 173 41.0
Manes.15G084700 Manihot esculenta HOM05D000010 ORTHO05D000151 1.4e-16 90.1 170 41.8
Peaxi162Scf00181g00124 Petunia axillaris HOM05D000010 ORTHO05D000151 1.2e-15 87.0 182 40.7
GSVIVG01014405001 Vitis vinifera HOM05D000010 ORTHO05D000151 1.6e-15 86.7 159 39.6
Sabra16G0265800 Salix brachista HOM05D000010 ORTHO05D000151 2.0e-15 86.3 172 39.0
MSTRG.15213 Avicennia marina HOM05D000010 ORTHO05D000151 2.7e-15 85.9 173 42.2
Potri.001G404400 Populus trichocarpa HOM05D000010 ORTHO05D000151 3.5e-15 85.5 173 39.9
Dinv08323 Davidia involucrata HOM05D000010 ORTHO05D000151 1.3e-14 83.6 155 41.9
Potri.011G123500 Populus trichocarpa HOM05D000010 ORTHO05D000151 2.3e-14 82.8 171 38.6
Duzib213G0115 Durio zibethinus HOM05D000010 ORTHO05D000151 3.0e-14 82.4 173 41.0
Lj3g0002523 Lotus japonicus HOM05D000010 ORTHO05D000151 5.0e-14 81.6 175 39.4
Dinv22375 Davidia involucrata HOM05D000010 ORTHO05D000151 1.9e-13 79.7 165 41.8
Phvul.005G084600 Phaseolus vulgaris HOM05D000010 ORTHO05D000151 1.9e-13 79.7 184 42.4
Sabra11G0109000 Salix brachista HOM05D000010 ORTHO05D000151 1.9e-13 79.7 173 39.9
Solyc10g006880.3 Solanum lycopersicum HOM05D000010 ORTHO05D000151 2.5e-13 79.3 178 37.6
PGSC0003DMG400025031 Solanum tuberosum HOM05D000010 ORTHO05D000151 2.5e-13 79.3 177 39.0
Duzib268G0454 Durio zibethinus HOM05D000010 ORTHO05D000151 3.3e-13 79.0 172 40.7
Oeu003834.1 Olea europaea HOM05D000010 ORTHO05D000151 3.3e-13 79.0 141 41.8
Hma1.2p1_1143F.1_g261180 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 5.6e-13 78.2 161 40.4
Oeu005429.1 Olea europaea HOM05D000010 ORTHO05D000151 5.6e-13 78.2 145 42.8
Nitab4.5_0001204g0110 Nicotiana tabacum HOM05D000010 ORTHO05D000151 9.5e-13 77.4 179 40.8
Gorai.013G167100 Gossypium raimondii HOM05D000010 ORTHO05D000151 1.2e-12 77.0 169 40.8
Gohir.A13G144700 Gossypium hirsutum HOM05D000010 ORTHO05D000151 1.6e-12 76.6 169 39.6
Lalb_Chr20g0109931 Lupinus albus HOM05D000010 ORTHO05D000151 1.6e-12 76.6 168 38.7
Sopen10g002790 Solanum pennellii HOM05D000010 ORTHO05D000151 1.6e-12 76.6 178 37.1
Hma1.2p1_1274F.1_g271950 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 3.6e-12 75.5 160 37.5
Hma1.2p1_2417F.1_g321770 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 3.6e-12 75.5 160 37.5
TPR.G38963 Trifolium pratense HOM05D000010 ORTHO05D000151 3.6e-12 75.5 168 38.7
Gohir.D13G149400 Gossypium hirsutum HOM05D000010 ORTHO05D000151 4.7e-12 75.1 167 40.7
Hma1.2p1_1143F.1_g261200 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 6.2e-12 74.7 158 40.5
Hma1.2p1_1154F.1_g262220 Hydrangea macrophylla HOM05D000010 ORTHO05D000151 6.2e-12 74.7 158 40.5
Lsat_1_v5_gn_7_105761 Lactuca sativa HOM05D000010 ORTHO05D000151 8.1e-12 74.3 163 36.2
COL.COLO4_09449 Corchorus olitorius HOM05D000010 ORTHO05D000151 1.1e-11 73.9 177 36.7
Cpa.g.sc80.94 Carica papaya HOM05D000010 ORTHO05D000151 1.8e-11 73.2 175 38.9
Glyma.12G221400 Glycine max HOM05D000010 ORTHO05D000151 1.8e-11 73.2 196 38.8
SGA_v2.0_scaffold34G13724 Striga asiatica HOM05D000010 ORTHO05D000151 1.8e-11 73.2 161 39.8
QL08p019272 Quercus lobata HOM05D000010 ORTHO05D000151 4.0e-11 72.0 171 33.9
CSS0028026 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000151 5.2e-11 71.6 153 35.9
Gohir.D01G054000 Gossypium hirsutum HOM05D000010 ORTHO05D000151 5.2e-11 71.6 165 37.6
Gorai.009G433100 Gossypium raimondii HOM05D000010 ORTHO05D000151 5.2e-11 71.6 173 34.1
Lalb_Chr25g0286601 Lupinus albus HOM05D000010 ORTHO05D000151 5.2e-11 71.6 186 37.6
CSS0046480 Camellia sinensis var. sinensis HOM05D000010 ORTHO05D000151 6.8e-11 71.2 153 35.9
CAN.G162.88 Capsicum annuum HOM05D000010 ORTHO05D000151 6.8e-11 71.2 153 42.5
Aqoxy4G01249 Aquilegia oxysepala HOM05D000010 ORTHO05D000151 8.9e-11 70.9 168 32.1
Gohir.D05G359900 Gossypium hirsutum HOM05D000010 ORTHO05D000151 8.9e-11 70.9 174 33.9
Gorai.002G073800 Gossypium raimondii HOM05D000010 ORTHO05D000151 1.2e-10 70.5 165 37.0
Lalb_Chr01g0016901 Lupinus albus HOM05D000010 ORTHO05D000151 1.2e-10 70.5 159 37.7
CiPaw.11G174200 Carya illinoinensis HOM05D000010 ORTHO05D000151 1.5e-10 70.1 143 41.3
Haze_09494 Corylus avellana HOM05D000010 ORTHO05D000151 1.5e-10 70.1 169 34.3
VMungo1080G0131 Vigna mungo HOM05D000010 ORTHO05D000151 1.5e-10 70.1 195 37.9
Gohir.A01G066800 Gossypium hirsutum HOM05D000010 ORTHO05D000151 2.6e-10 69.3 165 37.0
Lalb_Chr01g0006461 Lupinus albus HOM05D000010 ORTHO05D000151 3.4e-10 68.9 140 37.9
MSTRG.12922 Avicennia marina HOM05D000010 ORTHO05D000151 4.4e-10 68.6 163 38.0
Lalb_Chr03g0030541 Lupinus albus HOM05D000010 ORTHO05D000151 4.4e-10 68.6 180 32.8
Prupe.4G187100 Prunus persica HOM05D000010 ORTHO05D000151 4.4e-10 68.6 175 35.4
Oeu060540.1 Olea europaea HOM05D000010 ORTHO05D000151 5.8e-10 68.2 137 43.8
TAR627G0607 Trochodendron aralioides HOM05D000010 ORTHO05D000151 5.8e-10 68.2 172 33.1
CiPaw.12G121700 Carya illinoinensis HOM05D000010 ORTHO05D000151 7.5e-10 67.8 185 36.8
arahy.Tifrunner.gnm1.ann1.65HUV4 Arachis hypogaea HOM05D000010 ORTHO05D000151 9.8e-10 67.4 185 33.5
MSTRG.14373 Avicennia marina HOM05D000010 ORTHO05D000151 9.8e-10 67.4 153 37.9
Gohir.A04G031300 Gossypium hirsutum HOM05D000010 ORTHO05D000151 9.8e-10 67.4 175 33.1
TWI38G1099 Tripterygium wilfordii HOM05D000010 ORTHO05D000151 9.8e-10 67.4 152 33.6
DCAR_022480 Daucus carota HOM05D000010 ORTHO05D000151 1.3e-09 67.0 155 38.1
Eucgr.F01091 Eucalyptus grandis HOM05D000010 ORTHO05D000151 1.7e-09 66.6 184 31.5
Glyma.12G148900 Glycine max HOM05D000010 ORTHO05D000151 1.7e-09 66.6 179 35.2
PGSC0003DMG400019293 Solanum tuberosum HOM05D000010 ORTHO05D000151 1.7e-09 66.6 156 41.0
TAR629G1105 Trochodendron aralioides HOM05D000010 ORTHO05D000151 1.7e-09 66.6 161 32.9
Medtr2g080010 Medicago truncatula HOM05D000010 ORTHO05D000151 2.9e-09 65.9 173 37.0
Glyma.13G280000 Glycine max HOM05D000010 ORTHO05D000151 3.7e-09 65.5 192 36.5
FAN16G1929 Fragaria x ananassa HOM05D000010 ORTHO05D000151 8.3e-09 64.3 157 38.9
Phvul.011G148000 Phaseolus vulgaris HOM05D000010 ORTHO05D000151 8.3e-09 64.3 179 36.9
FAN21G1756 Fragaria x ananassa HOM05D000010 ORTHO05D000151 1.9e-08 63.2 159 37.1
Lalb_Chr19g0134341 Lupinus albus HOM05D000010 ORTHO05D000151 2.4e-08 62.8 186 37.1
Psat5g245960 Pisum sativum HOM05D000010 ORTHO05D000151 3.2e-08 62.4 175 34.3
TWI38G0265 Tripterygium wilfordii HOM05D000010 ORTHO05D000151 3.2e-08 62.4 157 34.4
Cfa020537 Carpinus fangiana HOM05D000010 ORTHO05D000151 4.1e-08 62.0 174 32.2
Rhsim06G0195100 Rhododendron simsii HOM05D000010 ORTHO05D000151 4.1e-08 62.0 151 34.4
Dinv40525 Davidia involucrata HOM05D000596 ORTHO05D004566 7.1e-08 61.2 128 36.7
SGA_v2.0_scaffold73G24302 Striga asiatica HOM05D000010 ORTHO05D000151 7.1e-08 61.2 150 34.0
RcHm_v2.0_Chr5g0034821 Rosa chinensis HOM05D000010 ORTHO05D000151 1.2e-07 60.5 130 36.9
TWI39G0877 Tripterygium wilfordii HOM05D000010 ORTHO05D000151 1.6e-07 60.1 156 32.7
Nitab4.5_0001320g0120 Nicotiana tabacum HOM05D000010 ORTHO05D000151 2.1e-07 59.7 124 39.5
Sed0019051 Sechium edule HOM05D000010 ORTHO05D000151 2.1e-07 59.7 158 37.3
Nitab4.5_0000207g0220 Nicotiana tabacum HOM05D000010 ORTHO05D000151 2.7e-07 59.3 123 40.7
DCAR_013082 Daucus carota HOM05D000010 ORTHO05D000151 3.5e-07 58.9 155 36.1
Rhsim04G0019000 Rhododendron simsii HOM05D000010 ORTHO05D000151 3.5e-07 58.9 153 33.3
vmacro11824 Vaccinium macrocarpon HOM05D000010 ORTHO05D000151 3.5e-07 58.9 152 38.2
Atru.chr2.2766 Acer truncatum HOM05D000010 ORTHO05D000151 4.6e-07 58.5 185 35.1
Dinv39773 Davidia involucrata HOM05D000010 ORTHO05D000151 6.0e-07 58.2 151 34.4
FvH4_3g20700 Fragaria vesca HOM05D000010 ORTHO05D000151 6.0e-07 58.2 134 38.8
FAN11G0594 Fragaria x ananassa HOM05D000010 ORTHO05D000151 6.0e-07 58.2 134 38.8
MBI02_g19256_MAGBIO Magnolia biondii HOM05D000010 ORTHO05D000151 7.8e-07 57.8 164 28.7
MD03G1222600 Malus domestica HOM05D000010 ORTHO05D000151 1.3e-06 57.0 178 31.5
Medtr4g089135 Medicago truncatula HOM05D000010 ORTHO05D000151 1.3e-06 57.0 150 29.3
Dinv07518 Davidia involucrata HOM05D000010 ORTHO05D000151 1.7e-06 56.6 151 33.8
vmacro09547 Vaccinium macrocarpon HOM05D000010 ORTHO05D000151 1.7e-06 56.6 145 33.1
VMungo1127G0981 Vigna mungo HOM05D000010 ORTHO05D000151 2.3e-06 56.2 181 34.8
Ciclev10008628m.g Citrus clementina HOM05D000010 ORTHO05D000151 5.1e-06 55.1 202 31.2
MD11G1239900 Malus domestica HOM05D000010 ORTHO05D000151 5.1e-06 55.1 177 33.9
Nn1g06671 Nelumbo nucifera HOM05D000010 ORTHO05D000151 6.6e-06 54.7 154 33.8


User provided reference genes

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