Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 8.4e-80 300.4 168 100.0
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 3.1e-66 255.4 172 81.4
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 2.6e-57 225.7 173 70.5
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 7.7e-57 224.2 169 72.8
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 2.2e-56 222.6 174 70.7
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 2.9e-56 222.2 173 72.3
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 5.0e-56 221.5 169 72.2
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 8.5e-56 220.7 172 69.2
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 2.5e-55 219.2 171 70.2
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 2.5e-55 219.2 170 72.4
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 7.2e-55 217.6 176 68.8
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 9.4e-55 217.2 177 71.8
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 9.4e-55 217.2 174 67.8
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 1.2e-54 216.9 174 67.8
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 2.1e-54 216.1 172 70.3
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 2.1e-54 216.1 172 69.2
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 2.7e-54 215.7 172 70.9
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 3.6e-54 215.3 171 71.3
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 1.4e-53 213.4 175 68.0
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.8e-53 213.0 170 68.8
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 2.3e-53 212.6 170 68.2
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 2.3e-53 212.6 170 68.8
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 3.0e-53 212.2 176 69.9
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 3.0e-53 212.2 175 72.0
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 3.9e-53 211.8 175 69.1
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 5.1e-53 211.5 174 69.0
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 5.1e-53 211.5 169 69.2
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 8.8e-53 210.7 185 66.5
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 1.1e-52 210.3 179 68.7
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 2.0e-52 209.5 175 65.7
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 3.3e-52 208.8 176 69.3
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 3.3e-52 208.8 176 69.3
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 4.3e-52 208.4 174 69.0
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 1.3e-51 206.8 179 62.6
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 1.3e-51 206.8 178 62.9
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 1.3e-51 206.8 177 66.7
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.3e-51 206.8 174 66.1
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.7e-51 206.5 177 66.7
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.7e-51 206.5 177 66.1
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 1.7e-51 206.5 177 65.5
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 1.7e-51 206.5 169 66.9
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 2.2e-51 206.1 174 69.0
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 2.8e-51 205.7 174 65.5
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.8e-51 205.7 177 66.7
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 2.8e-51 205.7 174 65.5
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 3.7e-51 205.3 181 63.0
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 4.8e-51 204.9 180 68.3
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 8.2e-51 204.1 164 68.3
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 1.1e-50 203.8 172 67.4
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.1e-50 203.8 178 62.4
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 2.4e-50 202.6 174 63.8
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 2.4e-50 202.6 172 68.0
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 2.4e-50 202.6 176 66.5
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 2.4e-50 202.6 175 68.0
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 3.1e-50 202.2 175 64.6
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 3.1e-50 202.2 175 68.0
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 4.1e-50 201.8 173 71.7
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 6.9e-50 201.1 178 66.9
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.2e-49 200.3 174 67.8
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.2e-49 200.3 174 67.2
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 2.6e-49 199.1 173 68.8
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 4.5e-49 198.4 183 66.1
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 4.5e-49 198.4 171 69.6
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.0e-48 197.2 180 60.6
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 1.0e-48 197.2 166 70.5
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 1.3e-48 196.8 172 68.6
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 1.7e-48 196.4 174 67.8
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 6.5e-48 194.5 175 66.9
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 6.5e-48 194.5 174 68.4
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 4.2e-47 191.8 178 59.6
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 7.2e-47 191.0 129 76.0
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 1.2e-46 190.3 175 61.7
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 1.6e-46 189.9 177 66.7
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 4.7e-46 188.3 181 62.4
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 4.7e-46 188.3 174 67.8
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 6.1e-46 188.0 170 67.1
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 1.0e-45 187.2 132 71.2
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.8e-45 186.4 174 67.2
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 2.3e-45 186.0 171 62.0
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 3.9e-45 185.3 182 63.7
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.9e-45 185.3 173 63.6
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 5.1e-45 184.9 175 64.6
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 2.0e-44 183.0 129 75.2
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.6e-44 182.6 175 64.0
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 7.4e-44 181.0 115 78.3
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 7.4e-44 181.0 179 57.5
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 9.7e-44 180.6 171 61.4
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 1.7e-43 179.9 114 78.1
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 2.2e-43 179.5 137 70.8
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 2.8e-43 179.1 180 58.3
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 2.8e-43 179.1 171 57.9
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 3.7e-43 178.7 173 59.5
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 3.7e-43 178.7 139 66.9
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 1.1e-42 177.2 172 59.9
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 3.1e-42 175.6 170 58.8
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 4.1e-42 175.3 173 59.0
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 4.1e-42 175.3 173 59.0
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 4.1e-42 175.3 173 58.4
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 4.1e-42 175.3 170 60.6
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 4.1e-42 175.3 103 83.5
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 7.0e-42 174.5 170 57.1
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 9.1e-42 174.1 137 64.2
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 9.1e-42 174.1 137 64.2
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 9.1e-42 174.1 170 57.6
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 1.2e-41 173.7 136 67.6
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 1.2e-41 173.7 132 68.2
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 1.6e-41 173.3 170 56.5
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.6e-41 173.3 179 56.4
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 1.6e-41 173.3 173 60.1
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 2.6e-41 172.6 170 61.2
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 4.5e-41 171.8 179 56.4
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 2.9e-40 169.1 105 76.2
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 1.9e-39 166.4 172 57.6
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 3.2e-39 165.6 163 60.1
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 4.4e-36 155.2 110 72.7
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 8.2e-35 151.0 143 56.6
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 1.3e-32 143.7 85 81.2
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 3.2e-31 139.0 138 61.6
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 2.1e-30 136.3 135 53.3
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 3.0e-29 132.5 134 52.2
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 8.8e-29 131.0 110 55.5
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 1.2e-28 130.6 126 52.4
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 4.4e-28 128.6 129 58.1
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 9.8e-28 127.5 117 55.6
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 2.2e-24 116.3 141 48.2
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 4.7e-22 108.6 143 43.4
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 5.4e-18 95.1 170 47.1
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 3.3e-15 85.9 135 49.6
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 2.5e-07 59.7 112 29.5
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 1.2e-06 57.4 114 28.9
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.6e-06 57.0 112 29.5
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 1.6e-06 57.0 114 28.1
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 2.8e-06 56.2 114 28.1
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 3.6e-06 55.8 113 31.9
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 4.7e-06 55.5 112 28.6
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 4.7e-06 55.5 112 28.6
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 6.2e-06 55.1 112 28.6
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 6.2e-06 55.1 112 30.4


User provided reference genes

Program Settings