Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 5.4e-157 557.8 313 100.0
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 2.0e-66 256.9 260 53.5
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 4.9e-65 252.3 280 50.7
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 9.2e-64 248.1 300 54.7
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 2.3e-62 243.4 326 48.8
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 8.6e-62 241.5 305 47.2
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 1.6e-60 237.3 280 49.3
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 6.2e-60 235.3 295 53.2
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 1.8e-59 233.8 264 48.9
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 5.2e-59 232.3 289 47.4
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 1.5e-58 230.7 297 51.5
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 2.6e-58 229.9 269 53.2
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 7.6e-58 228.4 269 53.2
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 2.9e-57 226.5 303 48.2
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 9.2e-56 221.5 299 48.5
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 1.3e-54 217.6 266 52.3
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 2.3e-54 216.9 193 55.4
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 2.3e-54 216.9 262 50.0
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 8.7e-54 214.9 292 45.9
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 9.6e-53 211.5 282 48.9
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 2.1e-52 210.3 318 42.5
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 3.6e-52 209.5 277 45.1
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 1.4e-51 207.6 278 47.5
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 5.3e-51 205.7 258 46.9
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 2.0e-50 203.8 310 47.4
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 3.4e-50 203.0 289 43.9
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 7.6e-50 201.8 281 44.1
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 2.2e-49 200.3 312 46.2
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 4.9e-49 199.1 321 45.2
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 6.4e-49 198.7 297 48.1
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 8.4e-49 198.4 305 46.2
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 9.3e-48 194.9 273 44.0
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 9.3e-48 194.9 329 42.2
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 2.1e-47 193.7 308 42.2
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.7e-46 190.7 273 43.2
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 1.9e-45 187.2 256 40.6
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 2.5e-45 186.8 272 47.8
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 4.3e-45 186.0 307 40.1
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 1.6e-44 184.1 286 39.2
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 4.8e-44 182.6 274 44.9
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 1.1e-43 181.4 301 44.5
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 5.3e-43 179.1 306 38.9
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 5.3e-43 179.1 274 44.5
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 2.0e-42 177.2 190 51.6
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 2.6e-42 176.8 268 41.0
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 5.8e-42 175.6 298 41.3
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 1.7e-41 174.1 279 40.1
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 2.2e-41 173.7 315 38.4
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 3.8e-41 172.9 291 40.9
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 8.4e-41 171.8 166 57.8
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 1.1e-40 171.4 274 35.4
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 1.4e-40 171.0 277 37.9
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 2.4e-40 170.2 270 46.7
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 3.2e-40 169.9 269 39.0
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 3.2e-40 169.9 313 42.2
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 4.2e-40 169.5 274 40.9
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 5.4e-40 169.1 310 44.2
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 2.1e-39 167.2 267 39.7
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 4.6e-39 166.0 304 44.1
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 1.8e-38 164.1 161 54.7
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 3.0e-38 163.3 262 37.4
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 2.5e-37 160.2 308 38.6
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 2.5e-37 160.2 299 43.1
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 5.6e-37 159.1 204 43.6
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 5.6e-37 159.1 304 37.2
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 2.8e-36 156.8 281 42.3
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 6.2e-36 155.6 301 42.9
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 8.1e-36 155.2 267 40.8
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 8.1e-36 155.2 267 40.8
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 1.1e-35 154.8 259 45.9
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 1.4e-35 154.5 245 43.3
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 1.5e-34 151.0 298 39.9
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 2.6e-34 150.2 310 40.3
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 1.3e-33 147.9 313 39.0
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 1.3e-33 147.9 313 39.0
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 1.3e-33 147.9 329 35.0
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 2.9e-33 146.7 156 52.6
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 1.1e-32 144.8 203 43.3
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 1.9e-32 144.1 300 35.3
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 1.9e-32 144.1 260 41.2
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 4.2e-32 142.9 323 35.0
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 2.1e-31 140.6 193 39.9
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 2.1e-31 140.6 287 40.1
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 2.7e-31 140.2 237 39.2
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 6.0e-31 139.0 276 42.8
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 7.9e-31 138.7 254 37.4
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 7.4e-29 132.1 110 56.4
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 1.4e-27 127.9 317 32.8
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 6.9e-27 125.6 276 39.5
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 9.0e-27 125.2 276 39.5
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 7.9e-23 112.1 313 30.0
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.2e-20 104.0 226 43.4
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 2.2e-17 94.0 298 35.9
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 5.3e-11 72.8 291 26.8
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 2.0e-10 70.9 111 48.6
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 7.7e-10 68.9 190 30.0


User provided reference genes

Program Settings