Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039841.2 Olea europaea HOM05D001312 ORTHO05D008018 0.0e+00 1116.3 578 100.0
MSTRG.5801 Avicennia marina HOM05D001312 ORTHO05D008018 2.7e-178 629.4 568 59.2
Migut.J00495 Erythranthe guttata HOM05D001312 ORTHO05D008018 6.3e-167 591.7 565 56.6
CSS0027895 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 2.4e-166 589.7 568 55.5
PGSC0003DMG400028176 Solanum tuberosum HOM05D001312 ORTHO05D008018 6.9e-166 588.2 563 56.3
CSS0009438 Camellia sinensis var. sinensis HOM05D001312 ORTHO05D008018 2.6e-165 586.3 568 55.3
vmacro07336 Vaccinium macrocarpon HOM05D001312 ORTHO05D008018 8.5e-164 581.3 568 55.6
Nitab4.5_0004490g0050 Nicotiana tabacum HOM05D001312 ORTHO05D008018 9.7e-160 567.8 596 52.7
SalBow3G2703 Salvia bowleyana HOM05D001312 ORTHO05D008018 1.7e-159 567.0 597 53.4
Lj3A1005G38 Lonicera japonica HOM05D001312 ORTHO05D008018 3.7e-159 565.8 616 52.1
Actinidia39872 Actinidia chinensis HOM05D001312 ORTHO05D008018 7.0e-158 561.6 569 54.1
Cc06_g05050 Coffea canephora HOM05D001312 ORTHO05D008018 1.6e-157 560.5 567 53.4
Solyc10g083710.2 Solanum lycopersicum HOM05D001312 ORTHO05D008018 9.4e-155 551.2 567 53.4
TAR633G1314 Trochodendron aralioides HOM05D001312 ORTHO05D001832 2.7e-154 549.7 567 53.1
SGA_v2.0_scaffold40G15429 Striga asiatica HOM05D001312 ORTHO05D008018 8.0e-154 548.1 573 53.8
Thecc.05G079000 Theobroma cacao HOM05D001312 ORTHO05D008018 4.0e-153 545.8 566 52.1
RcHm_v2.0_Chr3g0471781 Rosa chinensis HOM05D001312 ORTHO05D008018 2.6e-152 543.1 568 51.9
FvH4_6g17520 Fragaria vesca HOM05D001312 ORTHO05D008018 1.1e-150 537.7 576 51.4
Gohir.D04G105500 Gossypium hirsutum HOM05D001312 ORTHO05D008018 9.1e-150 534.6 559 52.2
Gorai.009G409200 Gossypium raimondii HOM05D001312 ORTHO05D008018 2.7e-149 533.1 559 52.1
Rhsim03G0083100 Rhododendron simsii HOM05D001312 ORTHO05D008018 7.7e-149 531.6 540 53.3
TWI53G1380 Tripterygium wilfordii HOM05D001312 ORTHO05D008018 7.7e-149 531.6 563 51.7
CANSAT80G2114 Cannabis sativa HOM05D001312 ORTHO05D008018 1.0e-148 531.2 568 51.9
Potri.016G095900 Populus trichocarpa HOM05D001312 ORTHO05D008018 8.5e-148 528.1 563 51.5
COL.COLO4_22294 Corchorus olitorius HOM05D001312 ORTHO05D008018 1.5e-147 527.3 563 51.9
FAN05G3053 Fragaria x ananassa HOM05D001312 ORTHO05D008018 3.2e-147 526.2 585 50.3
FAN05G0775 Fragaria x ananassa HOM05D001312 ORTHO05D008018 9.4e-147 524.6 585 50.1
MD14G1093900 Malus domestica HOM05D001312 ORTHO05D008018 9.4e-147 524.6 568 50.7
FAN14G3191 Fragaria x ananassa HOM05D001312 ORTHO05D008018 1.0e-145 521.2 602 49.0
CiPaw.10G004200 Carya illinoinensis HOM05D001312 ORTHO05D008018 1.4e-145 520.8 567 50.8
QL07p040881 Quercus lobata HOM05D001312 ORTHO05D008018 2.8e-143 513.1 624 47.4
FAN09G2766 Fragaria x ananassa HOM05D001312 ORTHO05D008018 1.4e-142 510.8 602 47.8
Cpa.g.sc5.99 Carica papaya HOM05D001312 ORTHO05D008018 9.1e-142 508.1 561 49.6
GSVIVG01033751001 Vitis vinifera HOM05D001312 ORTHO05D008018 2.0e-141 506.9 512 53.7
Aqoxy1G00967 Aquilegia oxysepala HOM05D001312 ORTHO05D008018 4.5e-141 505.8 566 49.6
Phvul.007G224100 Phaseolus vulgaris HOM05D001312 ORTHO05D008018 4.5e-141 505.8 561 50.1
HanXRQChr01g0028401 Helianthus annuus HOM05D001312 ORTHO05D008018 7.7e-141 505.0 563 50.3
VMungo0720G0477 Vigna mungo HOM05D001312 ORTHO05D008018 3.8e-140 502.7 561 49.9
FAN02G1263 Fragaria x ananassa HOM05D001312 ORTHO05D008018 5.0e-140 502.3 568 49.5
PSO063G2793 Papaver somniferum HOM05D001312 ORTHO05D008018 5.0e-140 502.3 585 45.8
arahy.Tifrunner.gnm1.ann1.42C0B0 Arachis hypogaea HOM05D001312 ORTHO05D008018 1.5e-139 500.7 561 49.9
arahy.Tifrunner.gnm1.ann1.C1UQYX Arachis hypogaea HOM05D001312 ORTHO05D008018 1.5e-139 500.7 561 49.9
Medtr1g061560 Medicago truncatula HOM05D001312 ORTHO05D008018 1.5e-139 500.7 561 48.7
CsaV3_6G040350 Cucumis sativus L. HOM05D001312 ORTHO05D008018 2.5e-139 500.0 567 48.0
Glyma.10G065300 Glycine max HOM05D001312 ORTHO05D008018 2.5e-139 500.0 559 49.9
ECA248G1880 Erigeron canadensis HOM05D001312 ORTHO05D008018 3.2e-139 499.6 563 49.2
Eucgr.A01566 Eucalyptus grandis HOM05D001312 ORTHO05D008018 5.5e-139 498.8 562 48.8
Nitab4.5_0000132g0320 Nicotiana tabacum HOM05D001312 ORTHO05D008018 1.2e-138 497.7 596 48.0
Dinv35859 Davidia involucrata HOM05D001312 ORTHO05D008018 1.6e-138 497.3 489 55.8
Lsat_1_v5_gn_1_50640 Lactuca sativa HOM05D001312 ORTHO05D008018 2.1e-138 496.9 561 50.1
TPR.G5684 Trifolium pratense HOM05D001312 ORTHO05D008018 8.0e-138 495.0 561 47.6
ClCG04G009690 Citrullus lanatus HOM05D001312 ORTHO05D008018 5.2e-137 492.3 566 47.7
PSO339G3022 Papaver somniferum HOM05D001312 ORTHO05D008018 2.0e-136 490.3 556 47.8
BcaC06g32083 Brassica carinata HOM05D001312 ORTHO05D008018 2.6e-136 490.0 562 47.9
Sed0012062 Sechium edule HOM05D001312 ORTHO05D008018 2.6e-136 490.0 567 47.3
Lj5g0006635 Lotus japonicus HOM05D001312 ORTHO05D008018 3.7e-135 486.1 565 48.3
Atru.BG.216.p Acer truncatum HOM05D001312 ORTHO05D008018 6.3e-135 485.3 553 49.9
Sabra16G0101200 Salix brachista HOM05D001312 ORTHO05D008018 1.4e-134 484.2 664 43.8
Sp6g38960 Schrenkiella parvula HOM05D001312 ORTHO05D008018 1.3e-132 477.6 564 47.3
Carub.0006s0268 Capsella rubella HOM05D001312 ORTHO05D008018 3.8e-132 476.1 562 48.0
Gohir.A04G066728 Gossypium hirsutum HOM05D001312 ORTHO05D008018 3.8e-132 476.1 508 51.6
Nn6g35083 Nelumbo nucifera HOM05D001312 ORTHO05D008018 3.8e-132 476.1 567 47.6
A10p32330 Brassica napus HOM05D001312 ORTHO05D008018 5.0e-132 475.7 565 47.3
BraA10t45274Z Brassica rapa HOM05D001312 ORTHO05D008018 5.0e-132 475.7 565 47.3
AT5G03770 Arabidopsis thaliana HOM05D001312 ORTHO05D008018 1.1e-131 474.6 565 47.3
Thhalv10013569m.g Eutrema salsugineum HOM05D001312 ORTHO05D008018 1.1e-131 474.6 562 47.5
C09p73160 Brassica napus HOM05D001312 ORTHO05D008018 3.3e-131 473.0 565 47.3
THA.LOC104816378 Tarenaya hassleriana HOM05D001312 ORTHO05D008018 1.2e-130 471.1 563 46.7
Sc02g0001220 Simmondsia chinensis HOM05D001312 ORTHO05D008018 1.6e-130 470.7 517 50.1
BolC9t60051H Brassica oleracea HOM05D001312 ORTHO05D008018 6.1e-130 468.8 565 47.1
Manes.08G018900 Manihot esculenta HOM05D001312 ORTHO05D008018 1.0e-129 468.0 511 51.9
MELO3C024510.2 Cucumis melo HOM05D001312 ORTHO05D008018 2.6e-128 463.4 514 49.6
EL10Ac7g16768 Beta vulgaris HOM05D001312 ORTHO05D008018 6.4e-127 458.8 571 45.5
AL6G13310 Arabidopsis lyrata HOM05D001312 ORTHO05D008018 1.1e-126 458.0 582 45.5
Peaxi162Scf00110g01214 Petunia axillaris HOM05D001312 ORTHO05D008018 9.2e-126 454.9 620 44.7
Haze_19515 Corylus avellana HOM05D001312 ORTHO05D008018 7.8e-125 451.8 567 45.1
unitig_744.g24689 Utricularia gibba HOM05D001312 ORTHO05D008018 3.0e-124 449.9 556 46.4
Hma1.2p1_0651F.1_g195720 Hydrangea macrophylla HOM05D001312 ORTHO05D008018 5.2e-121 439.1 357 63.9
CiPaw.09G007400 Carya illinoinensis HOM05D001312 ORTHO05D008018 2.7e-117 426.8 497 48.7
ATR0820G168 Amborella trichopoda HOM05D001312 ORTHO05D008018 8.6e-116 421.8 573 42.8
SEGI_32755 Sequoiadendron giganteum HOM05D001312 ORTHO05D008018 3.3e-115 419.9 555 43.6
Ca_11617_v3 Cicer arietinum L. HOM05D001312 ORTHO05D008018 4.4e-112 409.5 539 44.7
Prupe.7G120300 Prunus persica HOM05D001312 ORTHO05D008018 2.9e-111 406.8 353 59.5
Atru.chr8.1664 Acer truncatum HOM05D001312 ORTHO05D008018 7.1e-110 402.1 432 50.7
Zm00001eb147410 Zea mays HOM05D001312 ORTHO05D008018 3.5e-109 399.8 557 42.7
Aa31LG1G21490 Aethionema arabicum HOM05D001312 ORTHO05D008018 8.1e-106 388.7 501 44.9
DCAR_015029 Daucus carota HOM05D001312 ORTHO05D008018 8.7e-100 368.6 348 56.0
Ah.15g091190 Amaranthus hybridus HOM05D001312 ORTHO05D008018 3.6e-98 363.2 512 42.4
Pp3c21_8090 Physcomitrium patens HOM05D001312 ORTHO05D008018 1.3e-92 344.7 558 36.7
SMO364G0357 Selaginella moellendorffii HOM05D001312 ORTHO05D008018 6.6e-92 342.4 551 38.5
MBI01_g23067_MAGBIO Magnolia biondii HOM05D001312 ORTHO05D008018 8.7e-92 342.0 380 47.9
CARHR209530 Cardamine hirsuta HOM05D001312 ORTHO05D008018 9.6e-91 338.6 381 47.8
Psat6g076240 Pisum sativum HOM05D001312 ORTHO05D008018 1.3e-90 338.2 313 57.8
Ciclev10032390m.g Citrus clementina HOM05D001312 ORTHO05D008018 3.8e-87 326.6 344 51.7
AagrBONN_evm.TU.Sc2ySwM_344.3661 Anthoceros agrestis HOM05D001312 ORTHO05D008018 5.1e-84 316.2 554 36.6
Mapoly0002s0209 Marchantia polymorpha HOM05D001312 ORTHO05D008018 1.2e-80 305.1 556 34.5
Hund20444 Selenicereus undatus HOM05D001312 ORTHO05D008018 2.1e-74 284.3 321 48.3
CBR_g874 Chara braunii HOM05D001312 ORTHO05D008018 1.6e-66 258.1 478 34.9
Sopen10g033180 Solanum pennellii HOM05D001312 ORTHO05D008018 1.4e-57 228.4 214 56.5
AUR62037894 Chenopodium quinoa HOM05D001312 ORTHO05D008018 1.2e-53 215.3 319 41.1
Lalb_Chr21g0315431 Lupinus albus HOM05D001312 ORTHO05D008018 9.1e-49 199.1 154 63.6
Os01g0857300 Oryza sativa ssp. japonica HOM05D001312 ORTHO05D008018 9.4e-46 189.1 294 38.4
Lalb_Chr21g0315421 Lupinus albus HOM05D001312 ORTHO05D008018 4.7e-45 186.8 172 58.1
AUR62033601 Chenopodium quinoa HOM05D001312 ORTHO05D008018 2.0e-43 181.4 365 33.7
MBI01_g48091_MAGBIO Magnolia biondii HOM05D001312 ORTHO05D008018 6.3e-42 176.4 155 59.4
HPP92_006796 Vanilla planifolia HOM05D001312 ORTHO05D008018 2.0e-40 171.4 369 31.7
arahy.Tifrunner.gnm1.ann1.IWGZ26 Arachis hypogaea HOM05D001312 ORTHO05D008018 4.5e-40 170.2 155 56.1
Ciclev10013092m.g Citrus clementina HOM05D001312 ORTHO05D008018 4.2e-38 163.7 144 56.9
CARHR208850 Cardamine hirsuta HOM05D001312 ORTHO05D008018 1.4e-36 158.7 117 63.2
DCAR_015030 Daucus carota HOM05D001312 ORTHO05D008018 1.6e-32 145.2 92 75.0
Glyma.13G150200 Glycine max HOM05D001312 ORTHO05D008018 1.6e-29 135.2 161 49.1
Lalb_Chr21g0315441 Lupinus albus HOM05D001312 ORTHO05D008018 4.7e-29 133.7 92 68.5
HPP92_006792 Vanilla planifolia HOM05D001312 ORTHO05D008018 2.2e-26 124.8 294 31.0
CARHR208860 Cardamine hirsuta HOM05D001312 ORTHO05D008018 3.4e-19 100.9 131 47.3
Zm00001eb059120 Zea mays HOM05D000212 ORTHO05D008018 4.4e-19 100.5 190 33.2
arahy.Tifrunner.gnm1.ann1.UHL2QJ Arachis hypogaea HOM05D000705 ORTHO05D008018 1.7e-15 88.6 157 32.5
VMungo0251G1834 Vigna mungo HOM05D001312 ORTHO05D008018 1.0e-07 62.8 45 62.2
Zm00001eb059130 Zea mays HOM05D000212 ORTHO05D002824 5.0e-07 60.5 44 59.1
Zm00001eb009840 Zea mays HOM05D001312 ORTHO05D008018 1.9e-06 58.5 35 68.6


User provided reference genes

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