Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039801.1 Olea europaea HOM05D000963 ORTHO05D005131 1.3e-160 569.7 287 100.0
PGSC0003DMG400036067 Solanum tuberosum HOM05D000963 ORTHO05D001540 1.0e-109 400.6 262 81.3
BcaNung01517 Brassica carinata HOM05D000963 ORTHO05D005131 1.1e-108 397.1 283 76.7
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 9.9e-105 384.0 263 79.5
DCAR_001146 Daucus carota HOM05D000963 ORTHO05D005131 2.2e-104 382.9 262 79.0
DCAR_032037 Daucus carota HOM05D000963 ORTHO05D005131 1.6e-94 350.1 243 78.2
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 6.0e-94 348.2 283 70.3
ECA169G0003 Erigeron canadensis HOM05D000963 ORTHO05D005131 7.8e-94 347.8 243 78.6
EL10As10g23961 Beta vulgaris HOM05D000963 ORTHO05D005131 3.3e-92 342.4 219 83.6
unitig_8.g4106 Utricularia gibba HOM05D000963 ORTHO05D005131 2.1e-91 339.7 243 77.4
PGSC0003DMG400018892 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.8e-90 336.7 243 77.0
Gohir.D03G074448 Gossypium hirsutum HOM05D000963 ORTHO05D005131 4.8e-83 312.0 223 76.7
Gohir.A12G092444 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.9e-74 281.6 223 70.0
SHI36398 Sapria himalayana HOM05D000963 ORTHO05D005131 3.3e-68 262.7 206 69.9
DCAR_001525 Daucus carota HOM05D000963 ORTHO05D005131 2.4e-66 256.5 254 61.0
unitig_87.g27920 Utricularia gibba HOM05D000963 ORTHO05D001540 2.6e-65 253.1 193 73.1
Oeu015125.1 Olea europaea HOM05D000963 ORTHO05D010201 3.0e-61 239.6 237 59.5
Migut.D01379 Erythranthe guttata HOM05D000963 ORTHO05D005131 1.1e-60 237.7 140 87.9
Sopen02g009100 Solanum pennellii HOM05D000963 ORTHO05D005131 5.7e-60 235.3 184 70.1
MBI08_g48228_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 1.1e-58 231.1 123 94.3
Gohir.A09G101420 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.8e-58 230.3 183 71.6
arahy.Tifrunner.gnm1.ann1.LWFR1C Arachis hypogaea HOM05D000963 ORTHO05D005131 3.8e-56 222.6 149 79.2
HPP92_028387 Vanilla planifolia HOM05D000963 ORTHO05D005131 1.4e-55 220.7 129 87.6
SGA_v2.0_scaffold893G53701 Striga asiatica HOM05D000963 ORTHO05D005131 5.5e-55 218.8 126 88.9
unitig_87.g28036 Utricularia gibba HOM05D000963 ORTHO05D005131 1.6e-54 217.2 126 88.9
vmacro22396 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.7e-54 216.5 126 88.9
vmacro22416 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.7e-54 216.5 126 88.9
vmacro22421 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 2.7e-54 216.5 126 88.9
VMungo0720G2312 Vigna mungo HOM05D000963 ORTHO05D005131 1.0e-53 214.5 117 91.5
RhsimPtG0005500 Rhododendron simsii HOM05D000963 ORTHO05D005131 1.1e-52 211.1 126 86.5
Gohir.D02G117532 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.4e-52 208.4 197 60.9
Sc03g0007080 Simmondsia chinensis HOM05D000963 ORTHO05D005131 9.7e-52 208.0 126 86.5
PGSC0003DMG400020295 Solanum tuberosum HOM05D000963 ORTHO05D005131 1.1e-50 204.5 129 83.7
SHI36890 Sapria himalayana HOM05D000963 ORTHO05D005131 1.8e-50 203.8 149 75.2
CSS0000719 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D005131 2.4e-50 203.4 234 55.6
SHI37614 Sapria himalayana HOM05D000963 ORTHO05D005131 4.1e-50 202.6 114 89.5
Lsat_1_v5_gn_9_35301 Lactuca sativa HOM05D000963 ORTHO05D005131 9.1e-50 201.4 149 71.1
arahy.Tifrunner.gnm1.ann1.J9XL5M Arachis hypogaea HOM05D000963 ORTHO05D005131 2.2e-48 196.8 110 90.0
DCAR_018748 Daucus carota HOM05D003334 ORTHO05D004076 8.5e-48 194.9 174 64.9
arahy.Tifrunner.gnm1.ann1.ZFFY2U Arachis hypogaea HOM05D000963 ORTHO05D005131 1.1e-47 194.5 160 68.1
Gohir.A13G086560 Gossypium hirsutum HOM05D000963 ORTHO05D005131 6.7e-45 185.3 140 72.1
Gohir.A12G053150 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.6e-44 183.3 140 72.9
PGSC0003DMG400046976 Solanum tuberosum HOM05D000963 ORTHO05D005131 6.3e-43 178.7 133 72.9
SHI47131 Sapria himalayana HOM05D000963 ORTHO05D005131 9.1e-42 174.9 104 87.5
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 4.5e-41 172.6 127 74.8
arahy.Tifrunner.gnm1.ann1.JE53Y0 Arachis hypogaea HOM05D000963 ORTHO05D005131 1.0e-40 171.4 94 90.4
SHI42531 Sapria himalayana HOM05D000963 ORTHO05D005131 3.8e-40 169.5 102 87.3
Migut.D01497 Erythranthe guttata HOM05D000963 ORTHO05D005131 1.9e-39 167.2 140 68.6
Sc05g0002290 Simmondsia chinensis HOM05D000963 ORTHO05D005131 6.1e-38 162.2 150 63.3
Oeu054373.3 Olea europaea HOM05D000540 ORTHO05D000681 8.0e-38 161.8 178 56.2
PGSC0003DMG400001215 Solanum tuberosum HOM05D000963 ORTHO05D005131 6.8e-37 158.7 186 53.2
arahy.Tifrunner.gnm1.ann1.UXAL1K Arachis hypogaea HOM05D000963 ORTHO05D011117 3.7e-35 152.9 87 87.4
Sopen10g016560 Solanum pennellii HOM05D000963 ORTHO05D005131 1.4e-34 151.0 84 86.9
Sc05g0004130 Simmondsia chinensis HOM05D000963 ORTHO05D005131 2.0e-33 147.1 241 44.4
SEGI_13287 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 1.2e-30 137.9 163 50.9
Hma1.2p1_0045F.1_g026530 Hydrangea macrophylla HOM05D000963 ORTHO05D005131 8.0e-30 135.2 85 83.5
Gohir.D04G090233 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.0e-29 134.8 118 65.3
Nitab4.5_0004533g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.2e-28 131.3 84 77.4
Gorai.012G100900 Gossypium raimondii HOM05D000963 ORTHO05D005131 1.5e-28 131.0 119 61.3
TAR365G0238 Trochodendron aralioides HOM05D001325 ORTHO05D001540 1.3e-27 127.9 77 83.1
SalBow6G4874 Salvia bowleyana HOM05D000963 ORTHO05D005131 2.2e-27 127.1 76 84.2
unitig_91.g26518 Utricularia gibba HOM05D001325 ORTHO05D001540 2.2e-27 127.1 76 84.2
unitig_91.g26528 Utricularia gibba HOM05D000963 ORTHO05D005131 2.2e-27 127.1 76 84.2
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 3.7e-27 126.3 72 87.5
Sc25g0002000 Simmondsia chinensis HOM05D000963 ORTHO05D005131 3.7e-27 126.3 72 87.5
Hund25913 Selenicereus undatus HOM05D000963 ORTHO05D005131 8.3e-27 125.2 77 79.2
arahy.Tifrunner.gnm1.ann1.D10MHU Arachis hypogaea HOM05D000963 ORTHO05D005131 1.4e-26 124.4 68 88.2
MBI13_g30267_MAGBIO Magnolia biondii HOM05D000571 ORTHO05D000435 1.4e-26 124.4 89 75.3
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 4.1e-26 122.9 76 81.6
Sc05g0004060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 1.0e-24 118.2 86 73.3
Gohir.A01G056250 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.3e-24 117.1 72 79.2
Nitab4.5_0004841g0030 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.5e-23 114.4 84 73.8
vmacro09305 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.2e-23 112.8 121 55.4
Sc14g0005060 Simmondsia chinensis HOM05D000963 ORTHO05D005131 7.2e-23 112.1 89 68.5
TAR633G0621 Trochodendron aralioides HOM05D000963 ORTHO05D005131 2.1e-22 110.5 63 82.5
Gohir.D10G125850 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.8e-22 110.2 76 73.7
C06p23110 Brassica napus HOM05D000963 ORTHO05D005131 2.0e-20 104.0 112 54.5
C09p24700 Brassica napus HOM05D000963 ORTHO05D005131 2.0e-20 104.0 112 54.5
C09p39380 Brassica napus HOM05D000963 ORTHO05D005131 2.0e-20 104.0 112 54.5
BraSC143t45666Z Brassica rapa HOM05D000963 ORTHO05D005131 2.0e-20 104.0 112 54.5
BraSC25t45900Z Brassica rapa HOM05D000963 ORTHO05D005131 2.0e-20 104.0 112 54.5
BraSC59t46558Z Brassica rapa HOM05D000963 ORTHO05D005131 2.0e-20 104.0 112 54.5
Cpa.g.sc389.2 Carica papaya HOM05D000963 ORTHO05D005131 3.4e-20 103.2 79 68.4
Dinv44812 Davidia involucrata HOM05D000086 ORTHO05D000431 4.4e-20 102.8 70 74.3
Nitab4.5_0006211g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 4.4e-20 102.8 57 86.0
Oeu012784.1 Olea europaea HOM05D000963 ORTHO05D005131 9.8e-20 101.7 91 63.7
Nitab4.5_0000017g0110 Nicotiana tabacum HOM05D000963 ORTHO05D005131 2.2e-19 100.5 56 87.5
Sopen11g020190 Solanum pennellii HOM05D000963 ORTHO05D005131 1.4e-18 97.8 76 69.7
Gohir.D09G105350 Gossypium hirsutum HOM05D000963 ORTHO05D005131 2.4e-18 97.1 65 73.8
MBI16_g46635_MAGBIO Magnolia biondii HOM05D000963 ORTHO05D005131 2.4e-18 97.1 77 66.2
Cpa.g.sc86.15 Carica papaya HOM05D000963 ORTHO05D005131 5.9e-17 92.4 72 66.7
Nitab4.5_0008665g0050 Nicotiana tabacum HOM05D000963 ORTHO05D005131 1.3e-16 91.3 53 79.2
arahy.Tifrunner.gnm1.ann1.MJQ8WH Arachis hypogaea HOM05D000963 ORTHO05D011117 2.3e-16 90.5 121 51.2
Gohir.1Z049680 Gossypium hirsutum HOM05D000963 ORTHO05D005131 3.9e-16 89.7 49 83.7
Solyc01g017050.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 1.5e-15 87.8 52 78.8
SGA_v2.0_scaffold126G33874 Striga asiatica HOM05D000963 ORTHO05D005131 1.5e-15 87.8 51 80.4
VMungo0329G0006 Vigna mungo HOM05D010604 ORTHO05D012476 1.9e-15 87.4 260 35.0
VMungo1024G0002 Vigna mungo HOM05D000963 ORTHO05D005131 2.5e-15 87.0 64 68.8
Gorai.005G078000 Gossypium raimondii HOM05D000963 ORTHO05D005131 4.3e-15 86.3 72 65.3
EL10Ac7g17438 Beta vulgaris HOM05D000963 ORTHO05D005131 5.6e-15 85.9 55 74.5
SEGI_14910 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 1.2e-14 84.7 117 46.2
Medtr7g093213 Medicago truncatula HOM05D000963 ORTHO05D005131 2.1e-14 84.0 41 97.6
Potri.007G062061 Populus trichocarpa HOM05D010604 ORTHO05D012476 3.6e-14 83.2 118 50.0
SEGI_10061 Sequoiadendron giganteum HOM05D000963 ORTHO05D005131 8.0e-14 82.0 57 70.2
Nitab4.5_0000729g0060 Nicotiana tabacum HOM05D000963 ORTHO05D005131 2.3e-13 80.5 48 77.1
arahy.Tifrunner.gnm1.ann1.KZ3I51 Arachis hypogaea HOM05D010604 ORTHO05D012476 3.1e-13 80.1 240 35.0
vmacro09302 Vaccinium macrocarpon HOM05D000963 ORTHO05D005131 4.0e-13 79.7 60 70.0
Gorai.002G152100 Gossypium raimondii HOM05D000963 ORTHO05D005131 4.4e-12 76.3 53 66.0
Sc25g0002260 Simmondsia chinensis HOM05D000963 ORTHO05D005131 4.4e-12 76.3 41 90.2
Gohir.D01G121360 Gossypium hirsutum HOM05D000963 ORTHO05D005131 7.5e-12 75.5 53 64.2
SHI36889 Sapria himalayana HOM05D000963 ORTHO05D005131 7.5e-12 75.5 43 86.0
ECA234G4679 Erigeron canadensis HOM05D000476 ORTHO05D004793 9.8e-12 75.1 37 94.6
arahy.Tifrunner.gnm1.ann1.SH46T5 Arachis hypogaea HOM05D000963 ORTHO05D005131 1.7e-11 74.3 66 65.2
Migut.D01399 Erythranthe guttata HOM05D000963 ORTHO05D011117 4.9e-11 72.8 76 57.9
arahy.Tifrunner.gnm1.ann1.0LX666 Arachis hypogaea HOM05D010604 ORTHO05D012476 1.4e-10 71.2 139 38.8
Gorai.007G303200 Gossypium raimondii HOM05D000963 ORTHO05D005131 4.1e-10 69.7 61 59.0
arahy.Tifrunner.gnm1.ann1.G70FPN Arachis hypogaea HOM05D000963 ORTHO05D005131 1.2e-09 68.2 38 86.8
Gohir.D11G280866 Gossypium hirsutum HOM05D000963 ORTHO05D005131 1.6e-09 67.8 42 71.4
RhsimMtG0000800 Rhododendron simsii HOM05D010604 ORTHO05D012476 2.0e-09 67.4 55 63.6
arahy.Tifrunner.gnm1.ann1.05XESX Arachis hypogaea HOM05D010604 ORTHO05D012476 3.5e-09 66.6 48 70.8
BolSC46t60969H Brassica oleracea HOM05D000963 ORTHO05D005131 4.6e-09 66.2 54 70.4
Cfa010543 Carpinus fangiana HOM05D000963 ORTHO05D005131 7.8e-09 65.5 36 88.9
TPR.G33662 Trifolium pratense HOM05D004957 ORTHO05D006741 7.8e-09 65.5 35 82.9
Eucgr.I02498 Eucalyptus grandis HOM05D003497 ORTHO05D003964 1.7e-08 64.3 65 53.8
CsaV3_UNG209450 Cucumis sativus L. HOM05D010604 ORTHO05D012476 2.3e-08 63.9 48 68.8
Lsat_1_v5_gn_4_145420 Lactuca sativa HOM05D000963 ORTHO05D005131 2.3e-08 63.9 40 75.0
Lsat_1_v5_gn_4_50261 Lactuca sativa HOM05D004291 ORTHO05D005620 2.3e-08 63.9 48 68.8
Lsat_1_v5_gn_5_152921 Lactuca sativa HOM05D010604 ORTHO05D012476 2.3e-08 63.9 48 68.8
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 1.2e-06 58.2 123 36.6
Sopen09g020260 Solanum pennellii HOM05D010604 ORTHO05D012476 3.6e-06 56.6 106 39.6
EL10As15g24101 Beta vulgaris HOM05D014900 ORTHO05D018510 6.2e-06 55.8 36 72.2


User provided reference genes

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