Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039770.2 Olea europaea HOM05D000023 ORTHO05D000014 1.6e-70 269.2 132 100.0
Hma1.2p1_0174F.1_g076780 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 9.3e-34 147.1 108 62.0
Rhsim05G0106100 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.0e-32 143.7 116 57.8
Solyc09g047860.1 Solanum lycopersicum HOM05D000023 ORTHO05D000014 3.9e-32 141.7 128 52.3
Solyc12g070140.1 Solanum lycopersicum HOM05D000023 ORTHO05D000014 1.1e-29 133.7 117 53.8
EL10Ac1g02127 Beta vulgaris HOM05D000023 ORTHO05D000014 4.1e-29 131.7 132 49.2
EL10Ac6g14082 Beta vulgaris HOM05D000023 ORTHO05D000014 2.0e-28 129.4 132 48.5
EL10Ac2g03408 Beta vulgaris HOM05D000023 ORTHO05D000014 7.2e-26 120.9 107 52.3
Solyc03g078070.3 Solanum lycopersicum HOM05D000023 ORTHO05D000014 2.3e-24 115.9 93 57.0
EL10Ac8g20203 Beta vulgaris HOM05D000023 ORTHO05D000014 1.8e-21 106.3 89 53.9
Rhsim02G0187800 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.5e-20 101.7 79 60.8
PSO017G7398 Papaver somniferum HOM05D000023 ORTHO05D000014 1.1e-13 80.5 106 40.6
PSO675G8761 Papaver somniferum HOM05D000023 ORTHO05D000014 1.4e-13 80.1 106 40.6
Dinv09736 Davidia involucrata HOM05D000023 ORTHO05D017897 2.4e-13 79.3 81 50.6
QL02p052017 Quercus lobata HOM05D000023 ORTHO05D000014 3.1e-13 79.0 114 40.4
QL11p051169 Quercus lobata HOM05D000023 ORTHO05D000014 3.1e-13 79.0 114 40.4
QL04p040428 Quercus lobata HOM05D001491 ORTHO05D000014 4.1e-13 78.6 98 43.9
QL02p079277 Quercus lobata HOM05D000023 ORTHO05D000014 7.0e-13 77.8 114 40.4
QL04p042141 Quercus lobata HOM05D000023 ORTHO05D000014 7.0e-13 77.8 114 40.4
QL05p053353 Quercus lobata HOM05D000023 ORTHO05D000014 7.0e-13 77.8 114 40.4
QL06p001114 Quercus lobata HOM05D000023 ORTHO05D000014 7.0e-13 77.8 114 40.4
QL06p025366 Quercus lobata HOM05D000023 ORTHO05D000014 7.0e-13 77.8 114 40.4
QL10p053741 Quercus lobata HOM05D000023 ORTHO05D000014 7.0e-13 77.8 114 40.4
QL11p043807 Quercus lobata HOM05D000023 ORTHO05D000014 7.0e-13 77.8 114 40.4
Hund07498 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.6e-12 75.9 121 41.3
Dinv11853 Davidia involucrata HOM05D000023 ORTHO05D000014 5.9e-12 74.7 81 49.4
arahy.Tifrunner.gnm1.ann1.59J3RY Arachis hypogaea HOM05D000023 ORTHO05D000014 6.5e-11 71.2 95 37.9
vmacro19048 Vaccinium macrocarpon HOM05D000555 ORTHO05D000646 8.5e-11 70.9 100 36.0
QL06p009534 Quercus lobata HOM05D000132 ORTHO05D000014 1.1e-10 70.5 106 34.9
QL02p012945 Quercus lobata HOM05D000023 ORTHO05D000014 1.9e-10 69.7 107 37.4
QL10p037399 Quercus lobata HOM05D000023 ORTHO05D000014 1.9e-10 69.7 107 37.4
Rhsim02G0150800 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.9e-10 69.7 113 38.1
vmacro07813 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 2.5e-10 69.3 99 35.4
PSO017G0971 Papaver somniferum HOM05D000023 ORTHO05D000014 3.2e-10 68.9 121 36.4
PSO063G2876 Papaver somniferum HOM05D000023 ORTHO05D000014 3.2e-10 68.9 121 36.4
PSO063G7474 Papaver somniferum HOM05D000023 ORTHO05D000014 3.2e-10 68.9 121 36.4
QL03p021217 Quercus lobata HOM05D000023 ORTHO05D000014 4.2e-10 68.6 107 36.4
QL07p028333 Quercus lobata HOM05D000023 ORTHO05D000014 5.5e-10 68.2 107 35.5
Hund07711 Selenicereus undatus HOM05D000023 ORTHO05D000014 7.2e-10 67.8 85 36.5
TWI18G0892 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 7.2e-10 67.8 91 38.5
TWI77G0487 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 7.2e-10 67.8 95 38.9
Hund00797 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.4e-10 67.4 92 37.0
TWI77G0100 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.2e-09 67.0 91 37.4
Thecc.09G194700 Theobroma cacao HOM05D000023 ORTHO05D000014 2.1e-09 66.2 78 39.7
BcaC09g48560 Brassica carinata HOM05D000023 ORTHO05D000014 2.7e-09 65.9 124 32.3
BolC1t04816H Brassica oleracea HOM05D000023 ORTHO05D000014 2.7e-09 65.9 124 32.3
QL01p016263 Quercus lobata HOM05D000023 ORTHO05D000014 2.7e-09 65.9 74 44.6
arahy.Tifrunner.gnm1.ann1.PMWG6R Arachis hypogaea HOM05D000023 ORTHO05D000014 3.6e-09 65.5 97 37.1
Gohir.D08G105850 Gossypium hirsutum HOM05D000023 ORTHO05D000014 3.6e-09 65.5 50 58.0
Gorai.004G113200 Gossypium raimondii HOM05D000023 ORTHO05D000014 3.6e-09 65.5 50 58.0
COL.COLO4_20882 Corchorus olitorius HOM05D000023 ORTHO05D000014 4.7e-09 65.1 95 31.6
FvH4_5g23531 Fragaria vesca HOM05D000023 ORTHO05D000014 4.7e-09 65.1 125 32.8
TWI63G0054 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 4.7e-09 65.1 91 37.4
VMungo1080G0565 Vigna mungo HOM05D000023 ORTHO05D000014 4.7e-09 65.1 80 41.2
arahy.Tifrunner.gnm1.ann1.B0DQ39 Arachis hypogaea HOM05D000023 ORTHO05D000014 8.0e-09 64.3 110 37.3
BcaC03g13508 Brassica carinata HOM05D000023 ORTHO05D000014 8.0e-09 64.3 115 34.8
C01p48630 Brassica napus HOM05D000023 ORTHO05D000014 8.0e-09 64.3 124 32.3
Lalb_Chr22g0350591 Lupinus albus HOM05D000023 ORTHO05D000014 1.0e-08 63.9 77 40.3
BraA02t08161Z Brassica rapa HOM05D000023 ORTHO05D000014 1.4e-08 63.5 123 30.9
Lj2C996T2 Lonicera japonica HOM05D000023 ORTHO05D000014 1.4e-08 63.5 77 39.0
PSO339G2310 Papaver somniferum HOM05D000023 ORTHO05D000014 1.4e-08 63.5 73 41.1
Zm00001eb410340 Zea mays HOM05D000023 ORTHO05D000014 1.4e-08 63.5 68 44.1
AUR62023951 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.8e-08 63.2 85 35.3
AUR62038288 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.8e-08 63.2 85 35.3
Dinv29417 Davidia involucrata HOM05D000023 ORTHO05D000014 1.8e-08 63.2 77 39.0
PSO017G0124 Papaver somniferum HOM05D000023 ORTHO05D000014 1.8e-08 63.2 78 42.3
PSO063G3226 Papaver somniferum HOM05D000023 ORTHO05D000014 1.8e-08 63.2 78 42.3
PSO063G4346 Papaver somniferum HOM05D000023 ORTHO05D000014 1.8e-08 63.2 78 42.3
PSO170G3895 Papaver somniferum HOM05D000023 ORTHO05D000014 1.8e-08 63.2 78 42.3
PSO357G0123 Papaver somniferum HOM05D000023 ORTHO05D000014 1.8e-08 63.2 84 36.9
PSO478G1709 Papaver somniferum HOM05D000023 ORTHO05D000014 1.8e-08 63.2 78 42.3
PSO675G2708 Papaver somniferum HOM05D000023 ORTHO05D000014 1.8e-08 63.2 78 42.3
PSO675G6543 Papaver somniferum HOM05D000023 ORTHO05D000014 1.8e-08 63.2 78 42.3
PSO782G3350 Papaver somniferum HOM05D000023 ORTHO05D000014 1.8e-08 63.2 78 42.3
Cpa.g.sc47.51 Carica papaya HOM05D000023 ORTHO05D000014 2.3e-08 62.8 83 37.3
AUR62011831 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.3e-08 62.8 78 42.3
Ciclev10028008m.g Citrus clementina HOM05D000023 ORTHO05D000014 2.3e-08 62.8 77 39.0
Hma1.2p1_0895F.1_g233690 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.3e-08 62.8 77 39.0
Hma1.2p1_1288F.1_g273310 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.3e-08 62.8 77 39.0
QL01p013898 Quercus lobata HOM05D000023 ORTHO05D000014 2.3e-08 62.8 83 37.3
Sc03g0000440 Simmondsia chinensis HOM05D000023 ORTHO05D000014 2.3e-08 62.8 77 37.7
TPR.G39219 Trifolium pratense HOM05D001557 ORTHO05D001299 2.3e-08 62.8 67 38.8
Ah.01g016760 Amaranthus hybridus HOM05D000023 ORTHO05D000014 3.0e-08 62.4 85 35.3
EL10Ac9g21066 Beta vulgaris HOM05D000023 ORTHO05D000014 3.0e-08 62.4 77 37.7
CANSAT54G0270 Cannabis sativa HOM05D000023 ORTHO05D000014 3.0e-08 62.4 97 34.0
AUR62033875 Chenopodium quinoa HOM05D000023 ORTHO05D000014 3.0e-08 62.4 78 42.3
PGR102G0307 Punica granatum HOM05D000023 ORTHO05D000014 3.0e-08 62.4 77 39.0
QL04p036651 Quercus lobata HOM05D000023 ORTHO05D000014 3.0e-08 62.4 135 31.1
TWI39G1161 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.0e-08 62.4 77 37.7
arahy.Tifrunner.gnm1.ann1.CHR5JU Arachis hypogaea HOM05D000023 ORTHO05D000014 4.0e-08 62.0 110 36.4
BraA08t32468Z Brassica rapa HOM05D000023 ORTHO05D000014 4.0e-08 62.0 124 29.8
AUR62005034 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.0e-08 62.0 78 42.3
AUR62012446 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.0e-08 62.0 78 42.3
AUR62016849 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.0e-08 62.0 78 42.3
AUR62017341 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.0e-08 62.0 78 42.3
AUR62022259 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.0e-08 62.0 78 42.3
AUR62024763 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.0e-08 62.0 78 42.3
AUR62030082 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.0e-08 62.0 78 42.3
AUR62032748 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.0e-08 62.0 78 42.3
AUR62035427 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.0e-08 62.0 78 42.3
AUR62039095 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.0e-08 62.0 78 42.3
AUR62041775 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.0e-08 62.0 78 42.3
AUR62042701 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.0e-08 62.0 78 42.3
Haze_23460 Corylus avellana HOM05D000023 ORTHO05D000014 4.0e-08 62.0 76 38.2
FvH4_2g16371 Fragaria vesca HOM05D000023 ORTHO05D000014 4.0e-08 62.0 103 34.0
Sabra04G0128800 Salix brachista HOM05D000023 ORTHO05D000014 4.0e-08 62.0 82 36.6
arahy.Tifrunner.gnm1.ann1.Q120Q3 Arachis hypogaea HOM05D000023 ORTHO05D000014 5.2e-08 61.6 110 35.5
BcaC03g13506 Brassica carinata HOM05D000023 ORTHO05D000014 5.2e-08 61.6 58 46.6
AUR62022925 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.2e-08 61.6 100 38.0
Nn2g13977 Nelumbo nucifera HOM05D000023 ORTHO05D000014 5.2e-08 61.6 77 39.0
PSO384G2567 Papaver somniferum HOM05D000023 ORTHO05D000014 5.2e-08 61.6 78 41.0
TWI73G0533 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 5.2e-08 61.6 77 42.9
AUR62010486 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.7e-08 61.2 103 36.9
AUR62010569 Chenopodium quinoa HOM05D001983 ORTHO05D001935 6.7e-08 61.2 75 42.7
AUR62019364 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.7e-08 61.2 103 36.9
AUR62035857 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.7e-08 61.2 103 36.9
AUR62044629 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.7e-08 61.2 75 42.7
AUR62044734 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.7e-08 61.2 75 42.7
TPR.G17787 Trifolium pratense HOM05D000023 ORTHO05D000014 6.7e-08 61.2 98 34.7
FvH4_6g40844 Fragaria vesca HOM05D000023 ORTHO05D000014 8.8e-08 60.8 97 35.1
MD11G1156100 Malus domestica HOM05D000023 ORTHO05D000014 8.8e-08 60.8 77 39.0
Medtr4g130640 Medicago truncatula HOM05D013837 ORTHO05D000014 8.8e-08 60.8 55 47.3
arahy.Tifrunner.gnm1.ann1.QM4BK9 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.2e-07 60.5 101 36.6
Atru.chr1.2499 Acer truncatum HOM05D000023 ORTHO05D000014 1.5e-07 60.1 122 34.4
arahy.Tifrunner.gnm1.ann1.F23DGP Arachis hypogaea HOM05D000023 ORTHO05D000014 1.5e-07 60.1 101 36.6
Thhalv10029312m.g Eutrema salsugineum HOM05D000023 ORTHO05D000014 1.5e-07 60.1 108 35.2
Lj5g0002668 Lotus japonicus HOM05D000023 ORTHO05D000014 1.5e-07 60.1 107 33.6
PSO063G2055 Papaver somniferum HOM05D000023 ORTHO05D000014 1.5e-07 60.1 78 41.0
FAN05G3912 Fragaria x ananassa HOM05D000855 ORTHO05D017897 2.0e-07 59.7 87 36.8
Lj2g0007711 Lotus japonicus HOM05D000023 ORTHO05D000014 2.0e-07 59.7 109 38.5
RcHm_v2.0_Chr5g0055451 Rosa chinensis HOM05D000023 ORTHO05D000014 2.0e-07 59.7 73 35.6
EL10Ac6g15176 Beta vulgaris HOM05D000023 ORTHO05D000014 2.6e-07 59.3 101 31.7
Lj2g0000793 Lotus japonicus HOM05D000023 ORTHO05D000014 2.6e-07 59.3 57 52.6
PSO478G2971 Papaver somniferum HOM05D000023 ORTHO05D000014 2.6e-07 59.3 96 38.5
arahy.Tifrunner.gnm1.ann1.KV4G29 Arachis hypogaea HOM05D000023 ORTHO05D000014 3.3e-07 58.9 100 35.0
AUR62017996 Chenopodium quinoa HOM05D000023 ORTHO05D000014 4.4e-07 58.5 73 37.0
PSO104G0268 Papaver somniferum HOM05D000023 ORTHO05D000014 4.4e-07 58.5 66 43.9
Atru.chr3.3391 Acer truncatum HOM05D000023 ORTHO05D000014 5.7e-07 58.2 77 37.7
AUR62003684 Chenopodium quinoa HOM05D000023 ORTHO05D000014 5.7e-07 58.2 73 35.6
PSO675G8000 Papaver somniferum HOM05D000023 ORTHO05D000014 5.7e-07 58.2 52 48.1
Os02g0513700 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 7.5e-07 57.8 116 32.8
SpUn0447_0010 Schrenkiella parvula HOM05D000023 ORTHO05D000014 9.7e-07 57.4 117 29.9
SEGI_01977 Sequoiadendron giganteum HOM05D002039 ORTHO05D005834 9.7e-07 57.4 54 40.7
FvH4_5g08812 Fragaria vesca HOM05D000023 ORTHO05D000014 1.3e-06 57.0 97 35.1
Os06g0658400 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 1.3e-06 57.0 116 32.8
Ah.03g143300 Amaranthus hybridus HOM05D000023 ORTHO05D000014 1.7e-06 56.6 94 35.1
AUR62038522 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.7e-06 56.6 64 45.3
ECA234G2464 Erigeron canadensis HOM05D000014 ORTHO05D000093 2.2e-06 56.2 106 34.0
Lj6g0018275 Lotus japonicus HOM05D000023 ORTHO05D000014 2.2e-06 56.2 66 47.0
SEGI_24184 Sequoiadendron giganteum HOM05D003169 ORTHO05D000014 2.2e-06 56.2 52 44.2
TPR.G6135 Trifolium pratense HOM05D000023 ORTHO05D000014 2.2e-06 56.2 98 29.6
AUR62000817 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.8e-06 55.8 75 41.3
Lj6g0019681 Lotus japonicus HOM05D000023 ORTHO05D000014 2.8e-06 55.8 79 41.8
arahy.Tifrunner.gnm1.ann1.PERH2Y Arachis hypogaea HOM05D000023 ORTHO05D000014 3.7e-06 55.5 110 35.5
TWI74G0862 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 3.7e-06 55.5 76 38.2
Atru.chr5.1256 Acer truncatum HOM05D000023 ORTHO05D000014 4.8e-06 55.1 76 34.2
C04p23460 Brassica napus HOM05D000023 ORTHO05D000014 4.8e-06 55.1 107 33.6
HanXRQChr06g0171651 Helianthus annuus HOM05D000023 ORTHO05D000014 4.8e-06 55.1 101 33.7
BolC6t36018H Brassica oleracea HOM05D000023 ORTHO05D000014 6.3e-06 54.7 108 35.2
SEGI_02352 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 6.3e-06 54.7 77 33.8
SEGI_32758 Sequoiadendron giganteum HOM05D006224 ORTHO05D007691 6.3e-06 54.7 52 44.2
Atru.chr7.421 Acer truncatum HOM05D000023 ORTHO05D000014 8.2e-06 54.3 112 30.4


User provided reference genes

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