Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039761.1 Olea europaea HOM05D007422 ORTHO05D009333 2.4e-63 245.4 128 100.0
Lsat_1_v5_gn_8_142161 Lactuca sativa HOM05D007422 ORTHO05D009333 1.2e-46 189.9 126 73.0
Dinv18494 Davidia involucrata HOM05D007422 ORTHO05D009333 7.9e-46 187.2 127 78.0
vmacro18659 Vaccinium macrocarpon HOM05D007422 ORTHO05D009333 7.9e-46 187.2 131 76.3
MSTRG.2680 Avicennia marina HOM05D007422 ORTHO05D009333 3.9e-45 184.9 128 75.8
Cc07_g17580 Coffea canephora HOM05D007422 ORTHO05D009333 5.1e-45 184.5 129 76.0
HanXRQChr17g0559811 Helianthus annuus HOM05D007422 ORTHO05D009333 1.1e-44 183.3 126 73.0
Nitab4.5_0006443g0040 Nicotiana tabacum HOM05D007422 ORTHO05D009333 2.5e-44 182.2 128 75.0
Migut.H01100 Erythranthe guttata HOM05D007422 ORTHO05D009333 3.7e-43 178.3 128 73.4
Solyc03g078350.3 Solanum lycopersicum HOM05D007422 ORTHO05D009333 6.3e-43 177.6 128 71.1
Sopen03g021130 Solanum pennellii HOM05D007422 ORTHO05D009333 6.3e-43 177.6 128 71.1
PGSC0003DMG400018421 Solanum tuberosum HOM05D007422 ORTHO05D009333 6.9e-42 174.1 131 70.2
Manes.12G151600 Manihot esculenta HOM05D007422 ORTHO05D009333 4.5e-41 171.4 129 69.8
Prupe.6G165000 Prunus persica HOM05D007422 ORTHO05D009333 4.5e-41 171.4 128 74.2
PSO170G3514 Papaver somniferum HOM05D007422 ORTHO05D009333 5.9e-41 171.0 133 70.7
TAR628G0864 Trochodendron aralioides HOM05D007422 ORTHO05D009333 5.9e-41 171.0 125 72.8
CAN.G900.53 Capsicum annuum HOM05D007422 ORTHO05D009333 7.7e-41 170.6 128 71.1
Potri.005G056500 Populus trichocarpa HOM05D007422 ORTHO05D009333 1.3e-40 169.9 129 70.5
Manes.12G151400 Manihot esculenta HOM05D007422 ORTHO05D009333 1.7e-40 169.5 129 69.0
Peaxi162Scf00583g00227 Petunia axillaris HOM05D007422 ORTHO05D009333 2.9e-40 168.7 126 70.6
Duzib264G1170 Durio zibethinus HOM05D007422 ORTHO05D009333 3.8e-40 168.3 125 71.2
Gohir.D04G029700 Gossypium hirsutum HOM05D007422 ORTHO05D009333 6.5e-40 167.5 125 69.6
Gorai.012G032800 Gossypium raimondii HOM05D007422 ORTHO05D009333 6.5e-40 167.5 125 69.6
MD05G1015900 Malus domestica HOM05D007422 ORTHO05D009333 6.5e-40 167.5 122 72.1
RcHm_v2.0_Chr2g0118261 Rosa chinensis HOM05D007422 ORTHO05D009333 6.5e-40 167.5 127 70.9
MELO3C023262.2 Cucumis melo HOM05D007422 ORTHO05D009333 1.1e-39 166.8 122 73.8
CANSAT01G0526 Cannabis sativa HOM05D007422 ORTHO05D009333 1.4e-39 166.4 127 68.5
SGA_v2.0_scaffold137G35131 Striga asiatica HOM05D007422 ORTHO05D009333 1.9e-39 166.0 128 68.0
THA.LOC104821861 Tarenaya hassleriana HOM05D007422 ORTHO05D009333 3.2e-39 165.2 127 70.9
Gohir.A05G386900 Gossypium hirsutum HOM05D007422 ORTHO05D009333 4.2e-39 164.9 125 68.8
TWI75G1659 Tripterygium wilfordii HOM05D007422 ORTHO05D009333 7.2e-39 164.1 125 68.0
Nn1g06132 Nelumbo nucifera HOM05D007422 ORTHO05D009333 1.2e-38 163.3 127 72.4
Thecc.01G123800 Theobroma cacao HOM05D007422 ORTHO05D009333 1.2e-38 163.3 125 69.6
CiPaw.04G085200 Carya illinoinensis HOM05D007422 ORTHO05D009333 2.1e-38 162.5 130 68.5
PSO017G6029 Papaver somniferum HOM05D007422 ORTHO05D009333 2.1e-38 162.5 131 67.2
PGR102G2924 Punica granatum HOM05D007422 ORTHO05D009333 2.1e-38 162.5 125 67.2
arahy.Tifrunner.gnm1.ann1.DL1AJH Arachis hypogaea HOM05D007422 ORTHO05D009333 2.7e-38 162.2 128 66.4
arahy.Tifrunner.gnm1.ann1.PIK6SY Arachis hypogaea HOM05D007422 ORTHO05D009333 4.6e-38 161.4 128 66.4
DCAR_031485 Daucus carota HOM05D007422 ORTHO05D009333 1.0e-37 160.2 126 67.5
COL.COLO4_21895 Corchorus olitorius HOM05D007422 ORTHO05D009333 1.4e-37 159.8 127 68.5
ECA233G2273 Erigeron canadensis HOM05D002719 ORTHO05D002938 1.4e-37 159.8 105 75.2
TPR.G18719 Trifolium pratense HOM05D007422 ORTHO05D009333 1.4e-37 159.8 125 66.4
VMungo1309G2444 Vigna mungo HOM05D007422 ORTHO05D009333 1.4e-37 159.8 125 65.6
Medtr3g095670 Medicago truncatula HOM05D007422 ORTHO05D009333 2.3e-37 159.1 125 68.0
TWI31G1366 Tripterygium wilfordii HOM05D007422 ORTHO05D009333 2.3e-37 159.1 125 64.8
Lj1g0018544 Lotus japonicus HOM05D007422 ORTHO05D009333 3.0e-37 158.7 125 66.4
Sabra05G0048800 Salix brachista HOM05D007422 ORTHO05D009333 3.9e-37 158.3 138 65.9
CARHR039170 Cardamine hirsuta HOM05D007422 ORTHO05D009333 5.1e-37 157.9 128 68.8
Aa31LG10G5060 Aethionema arabicum HOM05D007422 ORTHO05D009333 6.7e-37 157.5 131 67.2
QL06p030244 Quercus lobata HOM05D007422 ORTHO05D009333 6.7e-37 157.5 138 63.0
Carub.0001s3836 Capsella rubella HOM05D007422 ORTHO05D009333 1.1e-36 156.8 123 70.7
Glyma.04G215300 Glycine max HOM05D007422 ORTHO05D009333 1.5e-36 156.4 128 64.8
Hund04464 Selenicereus undatus HOM05D007422 ORTHO05D009333 1.5e-36 156.4 124 68.5
Psat5g063240 Pisum sativum HOM05D007422 ORTHO05D009333 2.0e-36 156.0 125 66.4
Ah.02g122030 Amaranthus hybridus HOM05D007422 ORTHO05D009333 2.5e-36 155.6 126 65.1
AL1G56040 Arabidopsis lyrata HOM05D007422 ORTHO05D009333 2.5e-36 155.6 125 67.2
Thhalv10011860m.g Eutrema salsugineum HOM05D007422 ORTHO05D009333 2.5e-36 155.6 128 68.0
AT1G49170 Arabidopsis thaliana HOM05D007422 ORTHO05D009333 3.3e-36 155.2 125 66.4
A05p20740 Brassica napus HOM05D007422 ORTHO05D009333 3.3e-36 155.2 128 66.4
BraA05t20982Z Brassica rapa HOM05D007422 ORTHO05D009333 3.3e-36 155.2 128 66.4
Cfa002851 Carpinus fangiana HOM05D007422 ORTHO05D009333 3.3e-36 155.2 129 65.1
BolC5t32228H Brassica oleracea HOM05D007422 ORTHO05D009333 4.3e-36 154.8 128 66.4
Sp1g36060 Schrenkiella parvula HOM05D007422 ORTHO05D009333 5.7e-36 154.5 128 64.8
Glyma.06G150900 Glycine max HOM05D007422 ORTHO05D009333 7.4e-36 154.1 128 64.1
Sc03g0005110 Simmondsia chinensis HOM05D007422 ORTHO05D009333 7.4e-36 154.1 144 60.4
CDE06G1708 Ceratophyllum demersum HOM05D007422 ORTHO05D009333 1.3e-35 153.3 125 64.8
Lalb_Chr08g0238531 Lupinus albus HOM05D007422 ORTHO05D009333 1.3e-35 153.3 127 66.1
Phvul.009G147900 Phaseolus vulgaris HOM05D007422 ORTHO05D009333 1.3e-35 153.3 125 63.2
Aqoxy5G02143 Aquilegia oxysepala HOM05D007422 ORTHO05D009333 1.7e-35 152.9 132 62.9
BcaC05g27531 Brassica carinata HOM05D007422 ORTHO05D009333 1.7e-35 152.9 128 65.6
C05p35090 Brassica napus HOM05D007422 ORTHO05D009333 1.7e-35 152.9 128 65.6
CDE08G0547 Ceratophyllum demersum HOM05D007422 ORTHO05D009333 1.7e-35 152.9 125 64.8
unitig_60.g25621 Utricularia gibba HOM05D007422 ORTHO05D009333 2.2e-35 152.5 123 63.4
Zm00001eb076010 Zea mays HOM05D007422 ORTHO05D009333 4.8e-35 151.4 122 62.3
Cpa.g.sc42.105 Carica papaya HOM05D007422 ORTHO05D009333 6.3e-35 151.0 128 63.3
MBI17_g11164_MAGBIO Magnolia biondii HOM05D007422 ORTHO05D009333 1.4e-34 149.8 96 76.0
Atru.chr4.503 Acer truncatum HOM05D007422 ORTHO05D009333 3.1e-34 148.7 125 65.6
Ciclev10026766m.g Citrus clementina HOM05D007422 ORTHO05D009333 4.1e-34 148.3 122 65.6
Os04g0686300 Oryza sativa ssp. japonica HOM05D007422 ORTHO05D009333 7.7e-33 144.1 122 63.1
SEGI_34968 Sequoiadendron giganteum HOM05D007422 ORTHO05D009333 1.7e-32 142.9 121 59.5
Ca_16922_v3 Cicer arietinum L. HOM05D007422 ORTHO05D009333 2.2e-32 142.5 127 61.4
ATR0772G041 Amborella trichopoda HOM05D007422 ORTHO05D009333 1.1e-31 140.2 122 61.5
HPP92_006817 Vanilla planifolia HOM05D007422 ORTHO05D009333 1.6e-30 136.3 123 60.2
Prupe.6G164500 Prunus persica HOM05D007422 ORTHO05D009333 1.8e-29 132.9 128 61.7
FvH4_1g23360 Fragaria vesca HOM05D007422 ORTHO05D009333 2.2e-27 125.9 125 58.4
FAN19G2306 Fragaria x ananassa HOM05D007422 ORTHO05D009333 2.8e-27 125.6 121 59.5
BcaB02g11281 Brassica carinata HOM05D007422 ORTHO05D009333 2.6e-25 119.0 128 57.8
GSVIVG01026559001 Vitis vinifera HOM05D007422 ORTHO05D009333 1.0e-24 117.1 77 80.5
CSS0008685 Camellia sinensis var. sinensis HOM05D007422 ORTHO05D009333 6.5e-24 114.4 88 70.5
CsaV3_2G018110 Cucumis sativus L. HOM05D007422 ORTHO05D009333 7.2e-23 110.9 69 79.7
ClCG02G000660 Citrullus lanatus HOM05D007422 ORTHO05D009333 2.1e-22 109.4 85 69.4
Mapoly0054s0054 Marchantia polymorpha HOM05D007422 ORTHO05D009333 2.1e-22 109.4 94 54.3
EL10Ac6g15266 Beta vulgaris HOM05D007422 ORTHO05D009333 3.6e-22 108.6 73 71.2
Dinv05702 Davidia involucrata HOM05D007422 ORTHO05D009333 1.5e-20 103.2 69 78.3
Eucgr.H04923 Eucalyptus grandis HOM05D007422 ORTHO05D009333 9.7e-20 100.5 63 77.8
Haze_25151 Corylus avellana HOM05D007422 ORTHO05D009333 1.7e-19 99.8 89 59.6
AUR62003614 Chenopodium quinoa HOM05D007422 ORTHO05D009333 4.1e-18 95.1 127 47.2
AUR62017925 Chenopodium quinoa HOM05D007422 ORTHO05D009333 7.0e-18 94.4 85 61.2
BcaB02g11285 Brassica carinata HOM05D007422 ORTHO05D009333 5.0e-16 88.2 117 47.0
Sed0005171 Sechium edule HOM05D007422 ORTHO05D009333 1.1e-15 87.0 109 51.4
Pp3c13_2330 Physcomitrium patens HOM05D007422 ORTHO05D009333 1.3e-08 63.5 93 37.6
FAN23G3068 Fragaria x ananassa HOM05D007422 ORTHO05D009333 1.1e-07 60.5 54 59.3
Rhsim08G0003400 Rhododendron simsii HOM05D005663 ORTHO05D007258 1.9e-07 59.7 69 47.8
Migut.I00498 Erythranthe guttata HOM05D006654 ORTHO05D008201 1.2e-06 57.0 100 30.0
Sabra05G0049000 Salix brachista HOM05D007422 ORTHO05D009333 1.2e-06 57.0 49 67.3
RcHm_v2.0_Chr2g0118341 Rosa chinensis HOM05D007422 ORTHO05D009333 2.7e-06 55.8 41 73.2
Peaxi162Scf00089g00632 Petunia axillaris HOM05D006654 ORTHO05D008201 3.6e-06 55.5 100 29.0
PGR083G1205 Punica granatum HOM05D006654 ORTHO05D008201 3.6e-06 55.5 100 27.0
Mapoly0061s0139 Marchantia polymorpha HOM05D006654 ORTHO05D008201 4.7e-06 55.1 100 28.0
CAN.G352.15 Capsicum annuum HOM05D006654 ORTHO05D008201 6.1e-06 54.7 100 28.0
Nitab4.5_0003282g0120 Nicotiana tabacum HOM05D006654 ORTHO05D008201 6.1e-06 54.7 100 28.0
Nitab4.5_0004750g0080 Nicotiana tabacum HOM05D006654 ORTHO05D008201 6.1e-06 54.7 100 28.0
Solyc03g111330.4 Solanum lycopersicum HOM05D006654 ORTHO05D008201 6.1e-06 54.7 100 28.0
Sopen03g030460 Solanum pennellii HOM05D006654 ORTHO05D008201 6.1e-06 54.7 100 28.0
PGSC0003DMG402015240 Solanum tuberosum HOM05D006654 ORTHO05D008201 6.1e-06 54.7 100 28.0
SGA_v2.0_scaffold161G37776 Striga asiatica HOM05D006654 ORTHO05D008201 6.1e-06 54.7 100 28.0
CSS0035351 Camellia sinensis var. sinensis HOM05D006654 ORTHO05D008201 8.0e-06 54.3 100 27.0
HanXRQChr16g0497681 Helianthus annuus HOM05D006654 ORTHO05D008201 8.0e-06 54.3 100 28.0


User provided reference genes

Program Settings