Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039641.2 Olea europaea HOM05D006061 ORTHO05D007450 7.6e-94 347.1 163 100.0
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 4.5e-54 214.9 160 64.4
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 5.9e-54 214.5 160 62.5
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 1.0e-50 203.8 161 62.7
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 1.7e-48 196.4 160 56.9
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 5.9e-38 161.4 161 50.3
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 3.8e-37 158.7 160 48.1
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 2.3e-34 149.4 159 47.8
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 3.0e-34 149.1 165 46.1
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 4.0e-34 148.7 165 46.1
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 8.8e-34 147.5 159 47.2
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 8.8e-34 147.5 159 47.2
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 2.0e-33 146.4 161 45.3
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 2.6e-33 146.0 159 47.2
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 3.4e-33 145.6 159 46.5
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 4.4e-33 145.2 159 47.2
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 4.4e-33 145.2 163 47.2
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 9.8e-33 144.1 160 44.4
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 3.7e-32 142.1 160 45.0
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 8.3e-32 141.0 164 45.7
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 5.4e-31 138.3 157 45.2
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 9.1e-31 137.5 158 43.7
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 1.6e-30 136.7 178 41.6
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 2.0e-30 136.3 152 46.7
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 2.7e-30 136.0 160 41.9
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 3.5e-30 135.6 166 44.0
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 7.7e-30 134.4 163 42.3
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 1.3e-29 133.7 161 44.7
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 1.3e-29 133.7 160 43.1
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 1.3e-29 133.7 164 45.1
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 2.9e-29 132.5 153 42.5
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 2.9e-29 132.5 162 40.1
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 3.8e-29 132.1 154 43.5
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 3.8e-29 132.1 160 41.9
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 8.6e-29 131.0 161 43.5
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 8.6e-29 131.0 163 41.1
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 1.1e-28 130.6 162 42.6
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 1.1e-28 130.6 163 40.5
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 3.3e-28 129.0 157 43.3
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 3.3e-28 129.0 160 41.2
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 4.2e-28 128.6 159 42.8
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 1.2e-27 127.1 162 42.6
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 1.6e-27 126.7 136 47.1
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 2.1e-27 126.3 164 39.6
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 2.8e-27 125.9 159 40.9
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 3.6e-27 125.6 158 42.4
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 2.3e-26 122.9 159 39.6
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 3.0e-26 122.5 159 40.9
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 6.8e-26 121.3 161 41.6
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 6.8e-26 121.3 165 40.0
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 8.9e-26 120.9 160 41.2
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 8.9e-26 120.9 159 40.9
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 3.4e-25 119.0 160 38.1
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 9.8e-25 117.5 162 40.7
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 1.7e-24 116.7 159 37.1
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 1.7e-24 116.7 160 38.1
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 2.2e-24 116.3 159 39.0
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 3.7e-24 115.5 159 39.0
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 1.1e-23 114.0 155 41.9
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 7.0e-23 111.3 160 36.9
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 7.0e-23 111.3 160 36.2
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 7.0e-23 111.3 159 39.0
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 1.2e-22 110.5 141 42.6
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 1.2e-22 110.5 162 38.3
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 1.6e-22 110.2 162 37.7
VMungo1383G3184 Vigna mungo HOM05D006061 ORTHO05D007450 2.0e-22 109.8 164 39.6
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 3.5e-22 109.0 160 35.6
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 3.5e-22 109.0 160 35.6
Gohir.D10G064900 Gossypium hirsutum HOM05D006061 ORTHO05D007450 4.5e-22 108.6 135 43.7
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 5.9e-22 108.2 160 35.6
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 1.0e-21 107.5 160 37.5
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 1.3e-21 107.1 171 36.8
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 2.9e-21 105.9 162 35.8
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 3.9e-21 105.5 171 36.3
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 6.6e-21 104.8 162 34.6
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 8.6e-21 104.4 155 40.0
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 9.5e-20 100.9 156 35.9
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 1.2e-19 100.5 161 36.6
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 2.3e-18 96.3 164 36.0
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 4.0e-18 95.5 162 37.0
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 8.3e-16 87.8 189 32.3
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 6.0e-14 81.6 95 44.2
Psat1g093320 Pisum sativum HOM05D006061 ORTHO05D007450 5.0e-13 78.6 156 34.0
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 1.1e-12 77.4 198 31.8
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 1.5e-12 77.0 72 47.2
Psat0ss8385g0040 Pisum sativum HOM05D006061 ORTHO05D007450 5.6e-12 75.1 128 33.6
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 2.3e-10 69.7 202 28.2
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 8.9e-10 67.8 137 33.6


User provided reference genes

Program Settings