Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039639.1 Olea europaea HOM05D002889 ORTHO05D003366 1.0e-52 209.9 114 100.0
SGA_v2.0_scaffold3G01589 Striga asiatica HOM05D002889 ORTHO05D003366 1.6e-50 202.6 112 97.3
Oeu017344.1 Olea europaea HOM05D002889 ORTHO05D003366 6.2e-50 200.7 112 96.4
CSS0022688 Camellia sinensis var. sinensis HOM05D002889 ORTHO05D003366 8.0e-50 200.3 112 95.5
Dinv19241 Davidia involucrata HOM05D002889 ORTHO05D003366 8.0e-50 200.3 112 95.5
MD05G1182800 Malus domestica HOM05D002889 ORTHO05D003366 1.0e-49 199.9 112 95.5
FvH4_2g19850 Fragaria vesca HOM05D002889 ORTHO05D003366 1.4e-49 199.5 112 94.6
FAN15G1177 Fragaria x ananassa HOM05D002889 ORTHO05D003366 1.4e-49 199.5 112 94.6
FAN24G0698 Fragaria x ananassa HOM05D002889 ORTHO05D003366 1.4e-49 199.5 112 94.6
FAN27G1075 Fragaria x ananassa HOM05D002889 ORTHO05D003366 1.4e-49 199.5 112 94.6
Cc01_g17450 Coffea canephora HOM05D002889 ORTHO05D003366 1.8e-49 199.1 112 95.5
Prupe.8G209400 Prunus persica HOM05D002889 ORTHO05D003366 1.8e-49 199.1 112 94.6
Atru.chr5.1927 Acer truncatum HOM05D002889 ORTHO05D003366 2.3e-49 198.7 112 94.6
Nitab4.5_0000813g0100 Nicotiana tabacum HOM05D002889 ORTHO05D003366 2.3e-49 198.7 112 94.6
Duzib133G1137 Durio zibethinus HOM05D002889 ORTHO05D003366 3.1e-49 198.4 112 94.6
Duzib138G1300 Durio zibethinus HOM05D002889 ORTHO05D003366 3.1e-49 198.4 112 94.6
Gohir.A07G202300 Gossypium hirsutum HOM05D002889 ORTHO05D003366 3.1e-49 198.4 112 94.6
Gorai.001G235400 Gossypium raimondii HOM05D002889 ORTHO05D003366 3.1e-49 198.4 112 94.6
Thecc.01G236600 Theobroma cacao HOM05D002889 ORTHO05D003366 3.1e-49 198.4 112 94.6
TWI23G0798 Tripterygium wilfordii HOM05D002889 ORTHO05D003366 3.1e-49 198.4 112 94.6
TAR636G2078 Trochodendron aralioides HOM05D002889 ORTHO05D003366 3.1e-49 198.4 112 93.8
Dinv43034 Davidia involucrata HOM05D002889 ORTHO05D003366 5.2e-49 197.6 112 93.8
MD10G1170900 Malus domestica HOM05D002889 ORTHO05D003366 5.2e-49 197.6 112 93.8
Ca_08769_v3 Cicer arietinum L. HOM05D002889 ORTHO05D003366 6.8e-49 197.2 112 92.9
Actinidia37570 Actinidia chinensis HOM05D002889 ORTHO05D003366 8.9e-49 196.8 112 92.9
Eucgr.K03590 Eucalyptus grandis HOM05D002889 ORTHO05D003366 8.9e-49 196.8 112 93.8
Gohir.D07G208500 Gossypium hirsutum HOM05D002889 ORTHO05D003366 8.9e-49 196.8 112 93.8
Manes.12G044400 Manihot esculenta HOM05D002889 ORTHO05D003366 8.9e-49 196.8 112 93.8
Ciclev10018498m.g Citrus clementina HOM05D002889 ORTHO05D003366 1.2e-48 196.4 112 92.9
Peaxi162Scf00052g02011 Petunia axillaris HOM05D002889 ORTHO05D003366 1.2e-48 196.4 112 93.8
Glyma.19G171200 Glycine max HOM05D002889 ORTHO05D003366 1.5e-48 196.1 112 92.0
Lalb_Chr25g0289711 Lupinus albus HOM05D002889 ORTHO05D003366 1.5e-48 196.1 112 92.9
VMungo1383G1051 Vigna mungo HOM05D002889 ORTHO05D003366 1.5e-48 196.1 112 92.0
Phvul.001G168400 Phaseolus vulgaris HOM05D002889 ORTHO05D003366 2.0e-48 195.7 112 91.1
RcHm_v2.0_Chr6g0285551 Rosa chinensis HOM05D002889 ORTHO05D003366 2.0e-48 195.7 112 91.1
TWI14G1217 Tripterygium wilfordii HOM05D002889 ORTHO05D003366 2.0e-48 195.7 112 93.8
Lj2C1137G6 Lonicera japonica HOM05D002889 ORTHO05D003366 2.6e-48 195.3 112 92.9
MSTRG.17535 Avicennia marina HOM05D002889 ORTHO05D003366 3.4e-48 194.9 112 92.0
ClCG09G009410 Citrullus lanatus HOM05D002889 ORTHO05D003366 3.4e-48 194.9 112 91.1
MELO3C024150.2 Cucumis melo HOM05D002889 ORTHO05D003366 3.4e-48 194.9 112 91.1
CsaV3_7G025450 Cucumis sativus L. HOM05D002889 ORTHO05D003366 3.4e-48 194.9 112 91.1
Medtr7g099480 Medicago truncatula HOM05D002889 ORTHO05D003366 3.4e-48 194.9 112 92.0
Nn3g19858 Nelumbo nucifera HOM05D002889 ORTHO05D003366 3.4e-48 194.9 112 92.0
MSTRG.12505 Avicennia marina HOM05D002889 ORTHO05D003366 4.4e-48 194.5 112 92.0
Migut.N02247 Erythranthe guttata HOM05D002889 ORTHO05D003366 4.4e-48 194.5 112 92.0
Glyma.03G170000 Glycine max HOM05D002889 ORTHO05D003366 4.4e-48 194.5 112 91.1
Oeu015449.1 Olea europaea HOM05D002889 ORTHO05D003366 4.4e-48 194.5 112 92.0
Solyc09g063030.4 Solanum lycopersicum HOM05D002889 ORTHO05D003366 4.4e-48 194.5 112 92.0
Sopen09g025200 Solanum pennellii HOM05D002889 ORTHO05D003366 4.4e-48 194.5 112 92.0
SGA_v2.0_scaffold1G00677 Striga asiatica HOM05D002889 ORTHO05D003366 4.4e-48 194.5 112 92.9
Lsat_1_v5_gn_8_90261 Lactuca sativa HOM05D002889 ORTHO05D003366 5.8e-48 194.1 112 92.0
Lj1g0020070 Lotus japonicus HOM05D002889 ORTHO05D003366 5.8e-48 194.1 112 90.2
Nn1g03087 Nelumbo nucifera HOM05D002889 ORTHO05D003366 5.8e-48 194.1 112 92.0
TAR362G1318 Trochodendron aralioides HOM05D002889 ORTHO05D003366 5.8e-48 194.1 112 92.0
Manes.13G042800 Manihot esculenta HOM05D002889 ORTHO05D003366 7.5e-48 193.7 112 92.9
SalBow6G0687 Salvia bowleyana HOM05D002889 ORTHO05D003366 7.5e-48 193.7 112 93.8
SGA_v2.0_scaffold42G16158 Striga asiatica HOM05D002889 ORTHO05D003366 7.5e-48 193.7 112 92.9
TPR.G7556 Trifolium pratense HOM05D002889 ORTHO05D003366 7.5e-48 193.7 112 90.2
Gohir.A07G154000 Gossypium hirsutum HOM05D002889 ORTHO05D003366 9.8e-48 193.4 111 92.8
PGR044G2403 Punica granatum HOM05D002889 ORTHO05D003366 9.8e-48 193.4 112 92.0
Sed0001453 Sechium edule HOM05D002889 ORTHO05D003366 9.8e-48 193.4 112 90.2
Sed0016475 Sechium edule HOM05D002889 ORTHO05D003366 9.8e-48 193.4 112 91.1
unitig_899.g15235 Utricularia gibba HOM05D002889 ORTHO05D003366 9.8e-48 193.4 112 92.0
TAR365G1138 Trochodendron aralioides HOM05D002889 ORTHO05D003366 1.3e-47 193.0 112 91.1
Gorai.001G183300 Gossypium raimondii HOM05D002889 ORTHO05D003366 1.7e-47 192.6 112 92.0
Psat3g050160 Pisum sativum HOM05D002889 ORTHO05D003366 1.7e-47 192.6 112 90.2
Solyc06g008040.3 Solanum lycopersicum HOM05D002889 ORTHO05D003366 1.7e-47 192.6 112 91.1
Sopen06g002880 Solanum pennellii HOM05D002889 ORTHO05D003366 1.7e-47 192.6 112 91.1
ECA236G1707 Erigeron canadensis HOM05D002889 ORTHO05D003366 2.2e-47 192.2 112 90.2
HanXRQChr10g0287251 Helianthus annuus HOM05D002889 ORTHO05D003366 2.9e-47 191.8 112 90.2
THA.LOC104820061 Tarenaya hassleriana HOM05D002889 ORTHO05D003366 2.9e-47 191.8 112 92.0
GSVIVG01028491001 Vitis vinifera HOM05D002889 ORTHO05D003366 2.9e-47 191.8 112 90.2
Potri.002G253200 Populus trichocarpa HOM05D002889 ORTHO05D003366 3.7e-47 191.4 112 91.1
Rhsim13G0041900 Rhododendron simsii HOM05D002889 ORTHO05D003366 3.7e-47 191.4 112 91.1
Hund05497 Selenicereus undatus HOM05D002889 ORTHO05D003366 3.7e-47 191.4 112 89.3
Ah.08g213900 Amaranthus hybridus HOM05D002889 ORTHO05D003366 4.9e-47 191.0 112 90.2
arahy.Tifrunner.gnm1.ann1.EIAU9G Arachis hypogaea HOM05D002889 ORTHO05D003366 6.4e-47 190.7 112 88.4
arahy.Tifrunner.gnm1.ann1.PFSA3S Arachis hypogaea HOM05D002889 ORTHO05D003366 6.4e-47 190.7 112 88.4
CAN.G503.27 Capsicum annuum HOM05D002889 ORTHO05D003366 6.4e-47 190.7 112 91.1
Gohir.A08G192800 Gossypium hirsutum HOM05D002889 ORTHO05D003366 6.4e-47 190.7 112 89.3
HanXRQChr13g0409041 Helianthus annuus HOM05D002889 ORTHO05D003366 6.4e-47 190.7 112 89.3
Aa31LG8G17120 Aethionema arabicum HOM05D002889 ORTHO05D003366 1.1e-46 189.9 112 90.2
Actinidia09497 Actinidia chinensis HOM05D002889 ORTHO05D003366 1.4e-46 189.5 112 88.4
Ca_09624_v3 Cicer arietinum L. HOM05D002889 ORTHO05D003366 1.4e-46 189.5 112 89.3
Gohir.D07G160200 Gossypium hirsutum HOM05D002889 ORTHO05D003366 1.4e-46 189.5 112 91.1
Sabra02G0192400 Salix brachista HOM05D002889 ORTHO05D003366 1.4e-46 189.5 112 90.2
Haze_24745 Corylus avellana HOM05D002889 ORTHO05D003366 1.9e-46 189.1 112 88.4
vmacro14774 Vaccinium macrocarpon HOM05D002889 ORTHO05D003366 1.9e-46 189.1 112 89.3
Aqoxy5G00053 Aquilegia oxysepala HOM05D002889 ORTHO05D003366 2.4e-46 188.7 112 86.6
AL3G47890 Arabidopsis lyrata HOM05D002889 ORTHO05D003366 2.4e-46 188.7 112 90.2
BcaC04g22811 Brassica carinata HOM05D002889 ORTHO05D003366 2.4e-46 188.7 112 90.2
A07p00540 Brassica napus HOM05D002889 ORTHO05D003366 2.4e-46 188.7 112 90.2
A09p12740 Brassica napus HOM05D002889 ORTHO05D003366 2.4e-46 188.7 112 90.2
C07p00990 Brassica napus HOM05D002889 ORTHO05D003366 2.4e-46 188.7 112 90.2
C09p15080 Brassica napus HOM05D002889 ORTHO05D003366 2.4e-46 188.7 112 90.2
BolC7t40536H Brassica oleracea HOM05D002889 ORTHO05D003366 2.4e-46 188.7 112 90.2
BolC9t54414H Brassica oleracea HOM05D002889 ORTHO05D003366 2.4e-46 188.7 112 90.2
BraA07t27848Z Brassica rapa HOM05D002889 ORTHO05D003366 2.4e-46 188.7 112 90.2
EL10Ac7g17762 Beta vulgaris HOM05D002889 ORTHO05D003366 3.2e-46 188.3 112 88.4
Lj1A81G48 Lonicera japonica HOM05D002889 ORTHO05D003366 3.2e-46 188.3 112 88.4
Peaxi162Scf00499g00610 Petunia axillaris HOM05D002889 ORTHO05D003366 3.2e-46 188.3 112 89.3
TPR.G35800 Trifolium pratense HOM05D002889 ORTHO05D003366 3.2e-46 188.3 112 88.4
vmacro02730 Vaccinium macrocarpon HOM05D002889 ORTHO05D003366 3.2e-46 188.3 112 90.2
Carub.0003s3449 Capsella rubella HOM05D002889 ORTHO05D003366 4.1e-46 188.0 112 89.3
CARHR110690 Cardamine hirsuta HOM05D002889 ORTHO05D003366 4.1e-46 188.0 112 89.3
Cfa002518 Carpinus fangiana HOM05D002889 ORTHO05D003366 4.1e-46 188.0 112 87.5
Thhalv10001879m.g Eutrema salsugineum HOM05D002889 ORTHO05D003366 4.1e-46 188.0 112 89.3
Gorai.004G223500 Gossypium raimondii HOM05D002889 ORTHO05D003366 4.1e-46 188.0 112 88.4
MBI10_g16806_MAGBIO Magnolia biondii HOM05D002889 ORTHO05D003366 4.1e-46 188.0 113 89.4
Sp3g33430 Schrenkiella parvula HOM05D002889 ORTHO05D003366 4.1e-46 188.0 112 89.3
AT2G20190 Arabidopsis thaliana HOM05D002889 ORTHO05D003366 5.4e-46 187.6 112 89.3
BcaB03g16811 Brassica carinata HOM05D002889 ORTHO05D003366 5.4e-46 187.6 112 89.3
BcaNung04093 Brassica carinata HOM05D002889 ORTHO05D003366 5.4e-46 187.6 112 89.3
BraA09t36918Z Brassica rapa HOM05D002889 ORTHO05D003366 5.4e-46 187.6 112 89.3
PSO170G4103 Papaver somniferum HOM05D002889 ORTHO05D003366 5.4e-46 187.6 112 87.5
Cpa.g.sc8.204 Carica papaya HOM05D002889 ORTHO05D003366 7.0e-46 187.2 112 89.3
DCAR_018539 Daucus carota HOM05D002889 ORTHO05D003366 7.0e-46 187.2 112 87.5
Hund18347 Selenicereus undatus HOM05D002889 ORTHO05D003366 7.0e-46 187.2 113 89.4
CAN.G941.45 Capsicum annuum HOM05D002889 ORTHO05D003366 9.2e-46 186.8 112 87.5
Lj5g0008167 Lotus japonicus HOM05D002889 ORTHO05D003366 9.2e-46 186.8 112 87.5
Medtr1g069165 Medicago truncatula HOM05D002889 ORTHO05D003366 9.2e-46 186.8 112 87.5
Nitab4.5_0003180g0050 Nicotiana tabacum HOM05D002889 ORTHO05D003366 9.2e-46 186.8 112 89.3
PSO764G0331 Papaver somniferum HOM05D002889 ORTHO05D003366 1.6e-45 186.0 112 86.6
Nitab4.5_0002727g0040 Nicotiana tabacum HOM05D002889 ORTHO05D003366 2.0e-45 185.7 112 88.4
CiPaw.03G153400 Carya illinoinensis HOM05D002889 ORTHO05D003366 2.7e-45 185.3 112 85.7
Gohir.D08G210800 Gossypium hirsutum HOM05D002889 ORTHO05D003366 3.5e-45 184.9 112 87.5
FAN09G3985 Fragaria x ananassa HOM05D002889 ORTHO05D003366 4.6e-45 184.5 111 89.2
FAN21G2147 Fragaria x ananassa HOM05D002889 ORTHO05D003366 4.6e-45 184.5 111 89.2
AUR62008857 Chenopodium quinoa HOM05D002889 ORTHO05D003366 7.8e-45 183.7 112 85.7
AUR62025387 Chenopodium quinoa HOM05D002889 ORTHO05D003366 7.8e-45 183.7 112 85.7
Eucgr.H00823 Eucalyptus grandis HOM05D002889 ORTHO05D003366 7.8e-45 183.7 112 87.5
Glyma.19G060900 Glycine max HOM05D002889 ORTHO05D003366 2.3e-44 182.2 112 85.7
Psat6g064880 Pisum sativum HOM05D002889 ORTHO05D003366 2.3e-44 182.2 112 85.7
Lsat_1_v5_gn_9_11241 Lactuca sativa HOM05D002889 ORTHO05D003366 3.0e-44 181.8 112 84.8
CDE09G0867 Ceratophyllum demersum HOM05D002889 ORTHO05D003366 3.9e-44 181.4 112 84.8
QL09p043970 Quercus lobata HOM05D002889 ORTHO05D003366 3.9e-44 181.4 113 85.8
Glyma.13G130000 Glycine max HOM05D002889 ORTHO05D003366 5.0e-44 181.0 112 84.8
VMungo0720G0228 Vigna mungo HOM05D002889 ORTHO05D003366 5.0e-44 181.0 112 84.8
DCAR_012623 Daucus carota HOM05D002889 ORTHO05D003366 6.6e-44 180.6 112 83.9
CiPaw.04G108600 Carya illinoinensis HOM05D002889 ORTHO05D003366 8.6e-44 180.3 112 83.0
Phvul.007G156100 Phaseolus vulgaris HOM05D002889 ORTHO05D003366 1.9e-43 179.1 112 83.9
Glyma.10G042600 Glycine max HOM05D002889 ORTHO05D003366 3.3e-43 178.3 112 83.9
Lalb_Chr02g0152941 Lupinus albus HOM05D002889 ORTHO05D003366 2.8e-42 175.3 112 83.9
PGR083G0457 Punica granatum HOM05D002889 ORTHO05D003366 3.6e-42 174.9 112 83.9
Rhsim01G0258400 Rhododendron simsii HOM05D002889 ORTHO05D003366 4.7e-42 174.5 112 83.9
SEGI_29841 Sequoiadendron giganteum HOM05D002889 ORTHO05D003366 2.3e-41 172.2 112 81.2
ATR0787G124 Amborella trichopoda HOM05D002889 ORTHO05D003366 3.1e-41 171.8 112 80.4
HPP92_027293 Vanilla planifolia HOM05D002889 ORTHO05D003366 6.8e-41 170.6 106 81.1
arahy.Tifrunner.gnm1.ann1.73DRY2 Arachis hypogaea HOM05D002889 ORTHO05D003366 8.9e-41 170.2 119 79.0
arahy.Tifrunner.gnm1.ann1.CB4TML Arachis hypogaea HOM05D002889 ORTHO05D003366 8.9e-41 170.2 119 79.0
SHI47266 Sapria himalayana HOM05D002889 ORTHO05D003366 5.8e-40 167.5 112 77.7
BcaC06g36696 Brassica carinata HOM05D002889 ORTHO05D003366 1.7e-39 166.0 98 89.8
AagrBONN_evm.TU.Sc2ySwM_228.3600 Anthoceros agrestis HOM05D002889 ORTHO05D003366 2.2e-39 165.6 112 78.6
Mapoly0066s0036 Marchantia polymorpha HOM05D002889 ORTHO05D003366 3.7e-39 164.9 112 77.7
CDE02G3724 Ceratophyllum demersum HOM05D002889 ORTHO05D003366 8.3e-39 163.7 112 77.7
Os02g0617300 Oryza sativa ssp. japonica HOM05D002889 ORTHO05D003366 1.2e-37 159.8 113 72.6
Zm00001eb077900 Zea mays HOM05D002889 ORTHO05D003366 1.0e-36 156.8 113 69.9
Zm00001eb426220 Zea mays HOM05D002889 ORTHO05D003366 1.0e-36 156.8 113 69.9
SMO358G0024 Selaginella moellendorffii HOM05D002889 ORTHO05D003366 2.3e-36 155.6 112 74.1
Pp3c8_18290 Physcomitrium patens HOM05D002889 ORTHO05D003366 3.0e-36 155.2 112 71.4
Os04g0507500 Oryza sativa ssp. japonica HOM05D002889 ORTHO05D003366 5.1e-36 154.5 114 68.4
Pp3c24_11460 Physcomitrium patens HOM05D002889 ORTHO05D003366 8.6e-36 153.7 112 70.5
Hma1.2p1_1018F.1_g248420 Hydrangea macrophylla HOM05D002889 ORTHO05D003366 5.6e-35 151.0 97 81.4
unitig_746.g26747 Utricularia gibba HOM05D002889 ORTHO05D003366 1.5e-32 142.9 85 88.2
Lalb_Chr20g0113361 Lupinus albus HOM05D002889 ORTHO05D003366 3.4e-32 141.7 112 73.2
Pp3c3_31820 Physcomitrium patens HOM05D002889 ORTHO05D003366 4.9e-31 137.9 112 66.1
Duzib212G0822 Durio zibethinus HOM05D002889 ORTHO05D003366 6.0e-29 131.0 113 64.6
DCAR_015416 Daucus carota HOM05D002889 ORTHO05D045050 1.1e-27 126.7 111 64.9
Gorai.006G054600 Gossypium raimondii HOM05D002889 ORTHO05D003366 1.1e-27 126.7 113 62.8
COL.COLO4_05728 Corchorus olitorius HOM05D002889 ORTHO05D003366 7.3e-27 124.0 113 61.9
AagrBONN_evm.TU.Sc2ySwM_344.3270 Anthoceros agrestis HOM05D002889 ORTHO05D003366 2.0e-24 115.9 98 60.2
SMO235G0068 Selaginella moellendorffii HOM05D002889 ORTHO05D003366 2.7e-21 105.5 112 47.3
CDE08G0296 Ceratophyllum demersum HOM05D002889 ORTHO05D003366 1.3e-18 96.7 73 71.2
Zm00001eb116890 Zea mays HOM05D002889 ORTHO05D003366 2.1e-18 95.9 66 69.7
DCAR_012606 Daucus carota HOM05D002889 ORTHO05D045050 2.9e-15 85.5 113 48.7
SMO308G0007 Selaginella moellendorffii HOM05D002889 ORTHO05D003366 7.9e-13 77.4 63 69.8
Cre03.g154425 Chlamydomonas reinhardtii HOM05D002889 ORTHO05D003366 4.8e-10 68.2 99 41.4


User provided reference genes

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