Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039635.2 Olea europaea HOM05D001176 ORTHO05D007019 0.0e+00 1457.2 740 100.0
MSTRG.25741 Avicennia marina HOM05D001176 ORTHO05D007019 0.0e+00 1115.1 740 78.2
Cc08_g05630 Coffea canephora HOM05D001176 ORTHO05D007019 0.0e+00 1113.6 740 77.6
CSS0027781 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 0.0e+00 1108.2 741 78.0
SalBow4G1488 Salvia bowleyana HOM05D001176 ORTHO05D007019 0.0e+00 1099.3 740 76.1
Migut.A00530 Erythranthe guttata HOM05D001176 ORTHO05D007019 0.0e+00 1092.8 744 76.9
Duzib205G1840 Durio zibethinus HOM05D001176 ORTHO05D007019 0.0e+00 1089.3 740 75.8
GSVIVG01013198001 Vitis vinifera HOM05D001176 ORTHO05D007019 0.0e+00 1088.9 734 77.0
TAR375G1104 Trochodendron aralioides HOM05D001176 ORTHO05D007019 0.0e+00 1085.1 740 75.5
Nitab4.5_0000030g0410 Nicotiana tabacum HOM05D001176 ORTHO05D007019 0.0e+00 1082.8 734 76.3
Thecc.03G318700 Theobroma cacao HOM05D001176 ORTHO05D007019 0.0e+00 1082.8 740 75.8
Atru.chr8.2633 Acer truncatum HOM05D001176 ORTHO05D007019 0.0e+00 1076.2 741 75.7
COL.COLO4_11286 Corchorus olitorius HOM05D001176 ORTHO05D007019 0.0e+00 1075.1 734 75.3
Rhsim11G0036600 Rhododendron simsii HOM05D001176 ORTHO05D007019 5.1e-312 1074.7 785 72.9
Lj9C202G6 Lonicera japonica HOM05D001176 ORTHO05D007019 5.1e-312 1073.5 741 75.6
Gorai.004G178200 Gossypium raimondii HOM05D001176 ORTHO05D007019 6.1e-311 1070.5 734 74.7
CiPaw.11G075700 Carya illinoinensis HOM05D001176 ORTHO05D007019 7.6e-311 1070.1 741 75.3
Gohir.D08G170800 Gossypium hirsutum HOM05D001176 ORTHO05D007019 1.7e-310 1068.9 734 74.7
Haze_02517 Corylus avellana HOM05D001176 ORTHO05D007019 5.0e-310 1067.4 776 73.5
HanXRQChr03g0068151 Helianthus annuus HOM05D001176 ORTHO05D007019 1.5e-309 1065.8 740 74.7
Sopen08g024070 Solanum pennellii HOM05D001176 ORTHO05D007019 7.2e-309 1063.5 734 75.5
Solyc08g075440.4 Solanum lycopersicum HOM05D001176 ORTHO05D007019 9.4e-309 1063.1 734 75.5
Lj2g0027044 Lotus japonicus HOM05D001176 ORTHO05D007019 6.1e-308 1060.4 741 75.0
CAN.G930.8 Capsicum annuum HOM05D001176 ORTHO05D007019 2.3e-307 1058.5 734 74.9
SGA_v2.0_scaffold96G29093 Striga asiatica HOM05D001176 ORTHO05D007019 4.0e-307 1057.7 846 66.9
PGR031G2625 Punica granatum HOM05D001176 ORTHO05D007019 5.2e-307 1057.4 745 73.3
DCAR_001483 Daucus carota HOM05D001176 ORTHO05D007019 8.8e-307 1056.6 737 73.8
Eucgr.D02557 Eucalyptus grandis HOM05D001176 ORTHO05D007019 4.4e-306 1054.3 740 73.9
Gohir.A08G149700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 4.4e-306 1054.3 734 73.7
Psat2g146720 Pisum sativum HOM05D001176 ORTHO05D007019 2.8e-305 1051.6 741 74.4
Prupe.1G077200 Prunus persica HOM05D001176 ORTHO05D007019 1.1e-304 1049.7 740 74.6
Manes.15G189800 Manihot esculenta HOM05D001176 ORTHO05D007019 4.1e-304 1047.7 740 73.9
ECA240G2428 Erigeron canadensis HOM05D001176 ORTHO05D007019 7.0e-304 1047.0 740 73.5
RcHm_v2.0_Chr6g0304421 Rosa chinensis HOM05D001176 ORTHO05D007019 9.1e-304 1046.6 736 73.9
Glyma.11G090100 Glycine max HOM05D001176 ORTHO05D007019 1.2e-303 1046.2 741 74.0
Medtr5g025410 Medicago truncatula HOM05D001176 ORTHO05D007019 5.9e-303 1043.9 741 74.0
Lalb_Chr09g0324961 Lupinus albus HOM05D001176 ORTHO05D007019 1.0e-302 1043.1 741 74.1
AUR62017508 Chenopodium quinoa HOM05D001176 ORTHO05D007019 1.3e-302 1042.7 739 73.5
Lalb_Chr16g0380331 Lupinus albus HOM05D001176 ORTHO05D007019 8.5e-302 1040.0 742 73.5
Ciclev10011152m.g Citrus clementina HOM05D001176 ORTHO05D007019 1.1e-301 1039.6 734 74.5
Potri.004G236600 Populus trichocarpa HOM05D001176 ORTHO05D007019 5.5e-301 1037.3 740 72.8
Phvul.002G121100 Phaseolus vulgaris HOM05D001176 ORTHO05D007019 1.2e-300 1036.2 741 73.5
Peaxi162Scf00193g00811 Petunia axillaris HOM05D001176 ORTHO05D007019 6.8e-299 1030.4 734 73.7
FAN27G0701 Fragaria x ananassa HOM05D001176 ORTHO05D007019 2.6e-298 1028.5 734 73.3
Lsat_1_v5_gn_9_124460 Lactuca sativa HOM05D001176 ORTHO05D007019 5.7e-298 1027.3 756 72.2
EL10Ac5g11241 Beta vulgaris HOM05D001176 ORTHO05D007019 2.8e-297 1025.0 740 72.0
MBI04_g37458_MAGBIO Magnolia biondii HOM05D001176 ORTHO05D007019 4.9e-297 1024.2 739 71.4
Sc21g0000770 Simmondsia chinensis HOM05D001176 ORTHO05D007019 4.9e-297 1024.2 737 72.6
FAN20G0920 Fragaria x ananassa HOM05D001176 ORTHO05D007019 8.3e-297 1023.5 734 72.8
Sed0008250 Sechium edule HOM05D001176 ORTHO05D007019 8.3e-297 1023.5 741 72.3
Nitab4.5_0001333g0050 Nicotiana tabacum HOM05D001176 ORTHO05D007019 1.8e-296 1022.3 734 72.9
VMungo1215G1610 Vigna mungo HOM05D001176 ORTHO05D007019 1.8e-296 1022.3 741 72.6
TWI79G0428 Tripterygium wilfordii HOM05D001176 ORTHO05D007019 7.0e-296 1020.4 735 73.1
Ca_25034_v3 Cicer arietinum L. HOM05D001176 ORTHO05D007019 5.9e-295 1017.3 724 73.8
CsaV3_4G027950 Cucumis sativus L. HOM05D001176 ORTHO05D007019 1.0e-294 1016.5 741 72.6
MELO3C010519.2 Cucumis melo HOM05D001176 ORTHO05D007019 1.5e-293 1012.7 742 72.9
Sabra01G0180800 Salix brachista HOM05D001176 ORTHO05D007019 1.0e-291 1006.5 740 71.5
Oeu014108.2 Olea europaea HOM05D001176 ORTHO05D007019 3.0e-291 1005.0 816 68.5
ClCG11G016030 Citrullus lanatus HOM05D001176 ORTHO05D007019 4.0e-291 1004.6 741 72.2
Ah.05g167880 Amaranthus hybridus HOM05D001176 ORTHO05D007019 1.5e-290 1002.7 768 68.4
Aqoxy7G00899 Aquilegia oxysepala HOM05D001176 ORTHO05D007019 1.5e-290 1002.7 740 71.4
Gohir.D08G170700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 7.5e-290 1000.3 734 70.7
PSO732G0580 Papaver somniferum HOM05D001176 ORTHO05D007019 8.3e-289 996.9 742 69.8
unitig_748.g7392 Utricularia gibba HOM05D001176 ORTHO05D007019 4.1e-288 994.6 740 70.1
PSO675G7478 Papaver somniferum HOM05D001176 ORTHO05D007019 7.8e-287 990.3 742 69.9
TPR.G8989 Trifolium pratense HOM05D001176 ORTHO05D007019 5.0e-286 987.6 692 74.4
Nn1g09379 Nelumbo nucifera HOM05D001176 ORTHO05D007019 6.2e-284 980.7 740 70.0
THA.LOC104798522 Tarenaya hassleriana HOM05D001176 ORTHO05D007019 1.4e-283 979.5 741 70.2
ATR0665G266 Amborella trichopoda HOM05D001176 ORTHO05D007019 4.0e-283 978.0 739 68.9
Cpa.g.sc90.31 Carica papaya HOM05D001176 ORTHO05D007019 9.8e-282 973.4 740 69.3
AL1G45850 Arabidopsis lyrata HOM05D001176 ORTHO05D007019 1.7e-281 972.6 740 68.8
CDE04G2738 Ceratophyllum demersum HOM05D001176 ORTHO05D007019 2.9e-281 971.8 742 69.1
Carub.0001s3008 Capsella rubella HOM05D001176 ORTHO05D007019 5.4e-280 967.6 742 68.2
AT1G31780 Arabidopsis thaliana HOM05D001176 ORTHO05D007019 7.0e-280 967.2 740 68.6
BcaB07g32825 Brassica carinata HOM05D001176 ORTHO05D007019 6.6e-278 960.7 741 67.9
Thhalv10006980m.g Eutrema salsugineum HOM05D001176 ORTHO05D007019 5.6e-277 957.6 742 68.6
A09p34570 Brassica napus HOM05D001176 ORTHO05D007019 1.2e-276 956.4 741 68.4
Sp1g27470 Schrenkiella parvula HOM05D001176 ORTHO05D007019 1.2e-276 956.4 741 68.4
BraA09t38996Z Brassica rapa HOM05D001176 ORTHO05D007019 2.8e-276 955.3 741 68.3
CARHR031080 Cardamine hirsuta HOM05D001176 ORTHO05D007019 2.8e-276 955.3 741 68.2
Aa31LG2G14290 Aethionema arabicum HOM05D001176 ORTHO05D007019 3.6e-276 954.9 738 68.2
BcaC05g27192 Brassica carinata HOM05D001176 ORTHO05D007019 8.1e-276 953.7 741 68.2
BolC5t31821H Brassica oleracea HOM05D001176 ORTHO05D007019 8.1e-276 953.7 741 68.2
C05p30980 Brassica napus HOM05D001176 ORTHO05D007019 1.9e-272 942.6 741 67.3
Actinidia01255 Actinidia chinensis HOM05D001176 ORTHO05D007019 4.7e-260 901.4 598 78.4
SEGI_32977 Sequoiadendron giganteum HOM05D001176 ORTHO05D007019 1.8e-259 899.4 746 63.7
AUR62015049 Chenopodium quinoa HOM05D001176 ORTHO05D007019 4.6e-255 884.8 739 64.5
QL12p003889 Quercus lobata HOM05D001176 ORTHO05D007019 1.3e-254 883.2 1246 45.6
Zm00001eb009310 Zea mays HOM05D001176 ORTHO05D007019 1.3e-254 883.2 736 63.9
Mapoly0009s0222 Marchantia polymorpha HOM05D001176 ORTHO05D007019 3.5e-239 832.0 765 58.8
HPP92_018761 Vanilla planifolia HOM05D001176 ORTHO05D007019 3.4e-234 815.5 609 69.3
FvH4_2g37280 Fragaria vesca HOM05D001176 ORTHO05D007019 3.9e-230 802.0 513 79.7
Pp3c2_23210 Physcomitrium patens HOM05D001176 ORTHO05D007019 1.1e-229 800.4 766 55.7
PGSC0003DMG400001956 Solanum tuberosum HOM05D001176 ORTHO05D007019 3.6e-223 778.9 554 72.7
FAN15G1703 Fragaria x ananassa HOM05D001176 ORTHO05D007019 2.9e-217 759.2 469 81.7
SMO339G0033 Selaginella moellendorffii HOM05D001176 ORTHO05D007019 2.2e-209 733.0 740 55.3
MD13G1243800 Malus domestica HOM05D001176 ORTHO05D007019 1.1e-208 730.7 563 67.0
AagrBONN_evm.TU.Sc2ySwM_362.2951 Anthoceros agrestis HOM05D001176 ORTHO05D007019 1.1e-205 720.7 682 56.2
MD13G1244000 Malus domestica HOM05D001176 ORTHO05D007019 5.0e-193 678.7 419 81.9
Cre13.g587750 Chlamydomonas reinhardtii HOM05D001176 ORTHO05D007019 1.3e-137 494.6 762 39.6
PRCOL_00001869 Prasinoderma coloniale HOM05D001176 ORTHO05D007019 1.3e-137 494.6 744 40.2
Actinidia32787 Actinidia chinensis HOM05D001176 ORTHO05D007019 2.4e-131 473.8 741 42.2
Dinv41808 Davidia involucrata HOM05D001176 ORTHO05D007019 5.6e-128 462.6 270 86.3
MCO03G158 Micromonas commoda HOM05D001176 ORTHO05D007019 2.1e-127 460.7 749 38.2
CSS0004945 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 7.4e-120 435.6 741 41.8
CBR_g61503 Chara braunii HOM05D001176 ORTHO05D007019 4.1e-110 403.3 506 45.1
Dinv41809 Davidia involucrata HOM05D001176 ORTHO05D007019 1.5e-109 401.4 316 69.6
CSS0012136 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 1.7e-108 397.9 708 41.1
CSS0030107 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 1.8e-105 387.9 232 85.3
Cc07_g20650 Coffea canephora HOM05D001176 ORTHO05D007019 1.4e-102 378.3 476 50.8
MD13G1243900 Malus domestica HOM05D001176 ORTHO05D007019 4.1e-86 323.6 292 59.2
CDE07G2068 Ceratophyllum demersum HOM05D004834 ORTHO05D006247 1.7e-84 318.2 723 34.2
vmacro00085 Vaccinium macrocarpon HOM05D001176 ORTHO05D007019 7.5e-80 302.8 296 59.1
FAN15G2248 Fragaria x ananassa HOM05D001176 ORTHO05D007019 3.0e-73 280.8 267 57.7
Hund16023 Selenicereus undatus HOM05D001176 ORTHO05D007019 1.9e-67 261.5 204 70.1
CBR_g61501 Chara braunii HOM05D001176 ORTHO05D007019 6.8e-65 253.1 167 73.1
arahy.Tifrunner.gnm1.ann1.7XHH75 Arachis hypogaea HOM05D001176 ORTHO05D007019 2.2e-47 194.9 143 74.1
arahy.Tifrunner.gnm1.ann1.V0K3WG Arachis hypogaea HOM05D001176 ORTHO05D007019 2.2e-47 194.9 143 74.1
Glyma.01G154450 Glycine max HOM05D001176 ORTHO05D007019 4.9e-39 167.2 125 73.6
Glyma.01G154501 Glycine max HOM05D001176 ORTHO05D007019 1.0e-36 159.5 101 78.2
Os03g0225600 Oryza sativa ssp. japonica HOM05D001176 ORTHO05D007019 9.3e-30 136.3 118 58.5
HPP92_018762 Vanilla planifolia HOM05D001176 ORTHO05D007019 2.0e-24 118.6 84 64.3
CsaV3_4G027980 Cucumis sativus L. HOM05D001176 ORTHO05D007019 4.3e-19 100.9 83 61.4
Glyma.01G154551 Glycine max HOM05D001176 ORTHO05D214389 4.8e-18 97.4 73 68.5
TPR.G11479 Trifolium pratense HOM05D001176 ORTHO05D007019 9.0e-17 93.2 64 75.0
Zm00001eb399610 Zea mays HOM05D001176 ORTHO05D007019 4.2e-14 84.3 154 35.7


User provided reference genes

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