Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039575.1 Olea europaea HOM05D003091 ORTHO05D003671 4.7e-97 357.8 178 100.0
Oeu025901.1 Olea europaea HOM05D003091 ORTHO05D003671 6.6e-75 284.3 153 92.8
Oeu043280.2 Olea europaea HOM05D003091 ORTHO05D003671 1.2e-73 280.0 153 90.2
Migut.N02369 Erythranthe guttata HOM05D003091 ORTHO05D003671 4.7e-73 278.1 152 89.5
Manes.02G140400 Manihot esculenta HOM05D003091 ORTHO05D003671 2.3e-72 275.8 153 88.2
SGA_v2.0_scaffold496G52467 Striga asiatica HOM05D003091 ORTHO05D003671 2.3e-72 275.8 152 89.5
Dinv05057 Davidia involucrata HOM05D003091 ORTHO05D003671 3.1e-72 275.4 153 89.5
Hma1.2p1_0129F.1_g060120 Hydrangea macrophylla HOM05D003091 ORTHO05D003671 8.9e-72 273.9 153 88.2
Potri.001G276700 Populus trichocarpa HOM05D003091 ORTHO05D003671 1.2e-71 273.5 153 88.2
Cc01_g05530 Coffea canephora HOM05D003091 ORTHO05D003671 1.5e-71 273.1 153 88.2
COL.COLO4_05198 Corchorus olitorius HOM05D003091 ORTHO05D003671 2.0e-71 272.7 153 86.9
Dinv36179 Davidia involucrata HOM05D003091 ORTHO05D003671 2.6e-71 272.3 153 86.9
Potri.009G071600 Populus trichocarpa HOM05D003091 ORTHO05D003671 2.6e-71 272.3 153 88.2
Haze_21852 Corylus avellana HOM05D003091 ORTHO05D003671 3.4e-71 271.9 153 87.6
DCAR_029992 Daucus carota HOM05D003091 ORTHO05D003671 3.4e-71 271.9 153 88.9
Sc16g0011120 Simmondsia chinensis HOM05D003091 ORTHO05D003671 3.4e-71 271.9 153 88.2
Actinidia06957 Actinidia chinensis HOM05D003091 ORTHO05D003671 4.4e-71 271.6 153 86.9
Cpa.g.sc84.1 Carica papaya HOM05D003091 ORTHO05D003671 5.8e-71 271.2 153 86.3
Thecc.09G249800 Theobroma cacao HOM05D003091 ORTHO05D003671 5.8e-71 271.2 153 86.9
SGA_v2.0_scaffold29G12260 Striga asiatica HOM05D003091 ORTHO05D003671 1.7e-70 269.6 153 87.6
Ciclev10015833m.g Citrus clementina HOM05D003091 ORTHO05D003671 2.2e-70 269.2 153 85.0
GSVIVG01037261001 Vitis vinifera HOM05D003091 ORTHO05D003671 2.2e-70 269.2 153 86.3
Hund07443 Selenicereus undatus HOM05D003091 ORTHO05D003671 2.9e-70 268.9 152 88.2
TAR369G0586 Trochodendron aralioides HOM05D003091 ORTHO05D003671 2.9e-70 268.9 153 86.9
Manes.01G179800 Manihot esculenta HOM05D003091 ORTHO05D003671 3.8e-70 268.5 153 86.3
CSS0037821 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 6.4e-70 267.7 153 86.3
CiPaw.08G023500 Carya illinoinensis HOM05D003091 ORTHO05D003671 6.4e-70 267.7 153 85.6
Gorai.001G134600 Gossypium raimondii HOM05D003091 ORTHO05D003671 6.4e-70 267.7 153 85.6
TWI60G1477 Tripterygium wilfordii HOM05D003091 ORTHO05D003671 6.4e-70 267.7 153 85.6
Lj1C287G1 Lonicera japonica HOM05D003091 ORTHO05D003671 8.4e-70 267.3 153 86.3
Actinidia11659 Actinidia chinensis HOM05D003091 ORTHO05D003671 1.1e-69 266.9 153 85.0
MBI19_g08870_MAGBIO Magnolia biondii HOM05D003091 ORTHO05D003671 1.1e-69 266.9 156 85.9
Rhsim01G0194700 Rhododendron simsii HOM05D003091 ORTHO05D003671 1.1e-69 266.9 153 85.6
Duzib168G2072 Durio zibethinus HOM05D003091 ORTHO05D003671 1.4e-69 266.5 153 84.3
Gohir.A05G071500 Gossypium hirsutum HOM05D003091 ORTHO05D003671 1.4e-69 266.5 153 85.0
PGR054G0002 Punica granatum HOM05D003091 ORTHO05D003671 1.4e-69 266.5 153 83.0
PGR119G0724 Punica granatum HOM05D003091 ORTHO05D003671 1.4e-69 266.5 153 83.0
CiPaw.07G207100 Carya illinoinensis HOM05D003091 ORTHO05D003671 1.9e-69 266.2 153 85.0
Duzib150G1361 Durio zibethinus HOM05D003091 ORTHO05D003671 1.9e-69 266.2 153 85.6
Gohir.D05G074400 Gossypium hirsutum HOM05D003091 ORTHO05D003671 1.9e-69 266.2 153 85.0
Cfa013345 Carpinus fangiana HOM05D003091 ORTHO05D003671 2.4e-69 265.8 153 86.3
MSTRG.17631 Avicennia marina HOM05D003091 ORTHO05D003671 3.2e-69 265.4 152 86.2
EL10Ac4g10152 Beta vulgaris HOM05D003091 ORTHO05D003671 3.2e-69 265.4 152 86.2
CANSAT25G3396 Cannabis sativa HOM05D003091 ORTHO05D003671 3.2e-69 265.4 153 85.0
Migut.D00654 Erythranthe guttata HOM05D003091 ORTHO05D003671 3.2e-69 265.4 153 85.0
Gohir.A07G120600 Gossypium hirsutum HOM05D003091 ORTHO05D003671 3.2e-69 265.4 153 85.0
Gohir.D13G222900 Gossypium hirsutum HOM05D003091 ORTHO05D003671 3.2e-69 265.4 153 84.3
Gohir.D13G223001 Gossypium hirsutum HOM05D003091 ORTHO05D003671 3.2e-69 265.4 153 84.3
Gorai.013G254000 Gossypium raimondii HOM05D003091 ORTHO05D003671 3.2e-69 265.4 153 84.3
TAR633G0445 Trochodendron aralioides HOM05D003091 ORTHO05D003671 3.2e-69 265.4 153 86.3
Actinidia23988 Actinidia chinensis HOM05D003091 ORTHO05D003671 4.1e-69 265.0 153 85.6
Eucgr.J00700 Eucalyptus grandis HOM05D003091 ORTHO05D003671 4.1e-69 265.0 153 85.6
Gorai.009G075500 Gossypium raimondii HOM05D003091 ORTHO05D003671 4.1e-69 265.0 153 84.3
MD15G1097600 Malus domestica HOM05D003091 ORTHO05D003671 4.1e-69 265.0 153 85.0
CSS0001188 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 7.1e-69 264.2 153 83.7
CSS0007409 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 7.1e-69 264.2 153 83.7
CsaV3_3G047430 Cucumis sativus L. HOM05D003091 ORTHO05D003671 7.1e-69 264.2 153 83.7
EL10Ac4g10135 Beta vulgaris HOM05D003091 ORTHO05D003671 9.2e-69 263.8 152 85.5
TWI34G0762 Tripterygium wilfordii HOM05D003091 ORTHO05D003671 9.2e-69 263.8 153 84.3
TAR623G1108 Trochodendron aralioides HOM05D003091 ORTHO05D003671 9.2e-69 263.8 153 85.6
MBI13_g30131_MAGBIO Magnolia biondii HOM05D003091 ORTHO05D003671 1.2e-68 263.5 153 85.0
Ca_15619_v3 Cicer arietinum L. HOM05D003091 ORTHO05D003671 1.6e-68 263.1 153 85.0
Gohir.D07G124800 Gossypium hirsutum HOM05D003091 ORTHO05D003671 1.6e-68 263.1 153 84.3
arahy.Tifrunner.gnm1.ann1.0Z0DIR Arachis hypogaea HOM05D003091 ORTHO05D003671 2.1e-68 262.7 153 81.7
arahy.Tifrunner.gnm1.ann1.Y550S7 Arachis hypogaea HOM05D003091 ORTHO05D003671 2.1e-68 262.7 153 81.7
ClCG11G014020 Citrullus lanatus HOM05D003091 ORTHO05D003671 2.1e-68 262.7 153 83.7
PSO339G4627 Papaver somniferum HOM05D003091 ORTHO05D003671 2.1e-68 262.7 152 86.2
PSO384G1550 Papaver somniferum HOM05D003091 ORTHO05D003671 2.1e-68 262.7 152 86.2
Glyma.06G081900 Glycine max HOM05D003091 ORTHO05D003671 2.7e-68 262.3 153 84.3
MD08G1118300 Malus domestica HOM05D003091 ORTHO05D003671 2.7e-68 262.3 153 83.7
Peaxi162Scf00032g02617 Petunia axillaris HOM05D003091 ORTHO05D003671 2.7e-68 262.3 152 85.5
arahy.Tifrunner.gnm1.ann1.H5V5GF Arachis hypogaea HOM05D003091 ORTHO05D003671 3.5e-68 261.9 152 85.5
arahy.Tifrunner.gnm1.ann1.IEZM4M Arachis hypogaea HOM05D003091 ORTHO05D003671 3.5e-68 261.9 152 85.5
AUR62000182 Chenopodium quinoa HOM05D003091 ORTHO05D003671 3.5e-68 261.9 152 84.9
AUR62006534 Chenopodium quinoa HOM05D003091 ORTHO05D003671 3.5e-68 261.9 152 84.9
HanXRQChr13g0388471 Helianthus annuus HOM05D003091 ORTHO05D003671 3.5e-68 261.9 152 82.2
Psat0s3378g0040 Pisum sativum HOM05D003091 ORTHO05D003671 4.6e-68 261.5 153 83.0
Prupe.1G452500 Prunus persica HOM05D003091 ORTHO05D003671 6.0e-68 261.2 153 83.7
QL12p026400 Quercus lobata HOM05D003091 ORTHO05D003671 6.0e-68 261.2 153 84.3
Medtr1g008280 Medicago truncatula HOM05D003091 ORTHO05D003671 7.8e-68 260.8 152 82.9
Nitab4.5_0001500g0090 Nicotiana tabacum HOM05D003091 ORTHO05D003671 7.8e-68 260.8 152 83.6
BcaC03g17184 Brassica carinata HOM05D003091 ORTHO05D003671 1.0e-67 260.4 153 83.7
BcaC06g31199 Brassica carinata HOM05D003091 ORTHO05D003671 1.0e-67 260.4 153 83.0
A02p33230 Brassica napus HOM05D003091 ORTHO05D003671 1.0e-67 260.4 153 83.7
A09p24090 Brassica napus HOM05D003091 ORTHO05D003671 1.0e-67 260.4 153 83.7
C02p51130 Brassica napus HOM05D003091 ORTHO05D003671 1.0e-67 260.4 153 83.7
BolC2t11200H Brassica oleracea HOM05D003091 ORTHO05D003671 1.0e-67 260.4 153 83.7
BraA02t08347Z Brassica rapa HOM05D003091 ORTHO05D003671 1.0e-67 260.4 153 83.7
BraA09t38009Z Brassica rapa HOM05D003091 ORTHO05D003671 1.0e-67 260.4 153 83.7
Aqoxy2G00365 Aquilegia oxysepala HOM05D003091 ORTHO05D003671 1.3e-67 260.0 153 83.0
A06p43280 Brassica napus HOM05D003091 ORTHO05D003671 1.3e-67 260.0 153 83.0
C07p33670 Brassica napus HOM05D003091 ORTHO05D003671 1.3e-67 260.0 153 83.0
BraA06t27214Z Brassica rapa HOM05D003091 ORTHO05D003671 1.3e-67 260.0 153 83.0
CAN.G917.5 Capsicum annuum HOM05D003091 ORTHO05D003671 1.3e-67 260.0 153 83.7
Lj1g0011096 Lotus japonicus HOM05D003091 ORTHO05D003671 1.3e-67 260.0 153 84.3
TPR.G1379 Trifolium pratense HOM05D003091 ORTHO05D003671 1.3e-67 260.0 153 83.0
Thhalv10004551m.g Eutrema salsugineum HOM05D003091 ORTHO05D003671 1.7e-67 259.6 153 83.0
AL5G12770 Arabidopsis lyrata HOM05D003091 ORTHO05D003671 2.3e-67 259.2 153 82.4
AT2G03120 Arabidopsis thaliana HOM05D003091 ORTHO05D003671 2.3e-67 259.2 153 82.4
CARHR145460 Cardamine hirsuta HOM05D003091 ORTHO05D003671 2.3e-67 259.2 153 83.0
Ca_12810_v3 Cicer arietinum L. HOM05D003091 ORTHO05D003671 2.3e-67 259.2 152 82.2
Rhsim13G0211100 Rhododendron simsii HOM05D003091 ORTHO05D003671 2.3e-67 259.2 169 78.1
ATR0580G276 Amborella trichopoda HOM05D003091 ORTHO05D003671 3.0e-67 258.8 152 83.6
BcaB07g30310 Brassica carinata HOM05D003091 ORTHO05D003671 3.0e-67 258.8 153 83.7
Carub.0005s0195 Capsella rubella HOM05D003091 ORTHO05D003671 3.0e-67 258.8 153 82.4
HanXRQChr08g0216751 Helianthus annuus HOM05D003091 ORTHO05D003671 3.9e-67 258.5 153 82.4
THA.LOC104826452 Tarenaya hassleriana HOM05D003091 ORTHO05D003671 3.9e-67 258.5 153 82.4
BcaC04g21506 Brassica carinata HOM05D003091 ORTHO05D003671 5.1e-67 258.1 153 83.0
C09p30980 Brassica napus HOM05D003091 ORTHO05D003671 5.1e-67 258.1 153 83.0
Nitab4.5_0005212g0030 Nicotiana tabacum HOM05D003091 ORTHO05D003671 5.1e-67 258.1 154 85.1
Psat6g034320 Pisum sativum HOM05D003091 ORTHO05D003671 5.1e-67 258.1 152 81.6
Sabra09G0053900 Salix brachista HOM05D003091 ORTHO05D003671 5.1e-67 258.1 185 73.0
Sed0002878 Sechium edule HOM05D003091 ORTHO05D003671 5.1e-67 258.1 152 82.9
Glyma.14G142100 Glycine max HOM05D003091 ORTHO05D003671 6.6e-67 257.7 153 83.7
Peaxi162Scf00004g04618 Petunia axillaris HOM05D003091 ORTHO05D003671 6.6e-67 257.7 152 83.6
TPR.G12114 Trifolium pratense HOM05D003091 ORTHO05D003671 6.6e-67 257.7 152 80.9
ECA232G2856 Erigeron canadensis HOM05D003091 ORTHO05D003671 8.6e-67 257.3 153 81.7
FvH4_2g36110 Fragaria vesca HOM05D003091 ORTHO05D003671 8.6e-67 257.3 153 83.0
Lalb_Chr11g0064331 Lupinus albus HOM05D003091 ORTHO05D003671 8.6e-67 257.3 152 82.9
Sp2g14090 Schrenkiella parvula HOM05D003091 ORTHO05D003671 8.6e-67 257.3 153 83.0
Ah.04g161990 Amaranthus hybridus HOM05D003091 ORTHO05D003671 1.1e-66 256.9 152 82.9
CAN.G96.11 Capsicum annuum HOM05D003091 ORTHO05D003671 1.1e-66 256.9 152 82.2
FAN27G0636 Fragaria x ananassa HOM05D003091 ORTHO05D003671 1.1e-66 256.9 153 83.0
Nitab4.5_0000718g0270 Nicotiana tabacum HOM05D003091 ORTHO05D003671 1.1e-66 256.9 154 84.4
BcaB07g30686 Brassica carinata HOM05D003091 ORTHO05D003671 1.5e-66 256.5 153 83.0
FAN20G1214 Fragaria x ananassa HOM05D003091 ORTHO05D003671 1.5e-66 256.5 153 83.0
CDE06G0965 Ceratophyllum demersum HOM05D003091 ORTHO05D003671 1.9e-66 256.1 149 83.9
ECA233G4335 Erigeron canadensis HOM05D003091 ORTHO05D003671 1.9e-66 256.1 153 82.4
Glyma.04G080200 Glycine max HOM05D003091 ORTHO05D003671 1.9e-66 256.1 153 82.4
Phvul.009G106300 Phaseolus vulgaris HOM05D003091 ORTHO05D003671 1.9e-66 256.1 153 81.7
Aa31LG10G9280 Aethionema arabicum HOM05D003091 ORTHO05D003671 2.5e-66 255.8 153 81.0
Medtr3g109932 Medicago truncatula HOM05D003091 ORTHO05D003671 2.5e-66 255.8 153 82.4
Nn7g36666 Nelumbo nucifera HOM05D003091 ORTHO05D003671 2.5e-66 255.8 152 84.2
Sopen11g024530 Solanum pennellii HOM05D003091 ORTHO05D003671 3.3e-66 255.4 152 82.2
CDE02G3432 Ceratophyllum demersum HOM05D003091 ORTHO05D003671 4.3e-66 255.0 149 83.9
BolC9t55957H Brassica oleracea HOM05D003091 ORTHO05D003671 5.6e-66 254.6 153 82.4
RcHm_v2.0_Chr6g0305761 Rosa chinensis HOM05D003091 ORTHO05D003671 5.6e-66 254.6 153 81.7
unitig_27.g25006 Utricularia gibba HOM05D003091 ORTHO05D003671 7.3e-66 254.2 152 81.6
DCAR_002102 Daucus carota HOM05D003091 ORTHO05D003671 9.6e-66 253.8 154 83.1
Lsat_1_v5_gn_9_48160 Lactuca sativa HOM05D003091 ORTHO05D003671 9.6e-66 253.8 160 78.1
Nn2g14838 Nelumbo nucifera HOM05D003091 ORTHO05D003671 9.6e-66 253.8 153 83.0
Solyc01g008820.3 Solanum lycopersicum HOM05D003091 ORTHO05D003671 9.6e-66 253.8 152 81.6
Solyc11g064790.2 Solanum lycopersicum HOM05D003091 ORTHO05D003671 9.6e-66 253.8 152 80.9
Sopen01g004330 Solanum pennellii HOM05D003091 ORTHO05D003671 9.6e-66 253.8 152 81.6
PGSC0003DMG400022714 Solanum tuberosum HOM05D003091 ORTHO05D003671 9.6e-66 253.8 150 82.7
VMungo1309G1449 Vigna mungo HOM05D003091 ORTHO05D003671 9.6e-66 253.8 153 81.7
THA.LOC104816927 Tarenaya hassleriana HOM05D003091 ORTHO05D003671 1.6e-65 253.1 149 82.6
Os02g0117400 Oryza sativa ssp. japonica HOM05D003091 ORTHO05D003671 1.1e-64 250.4 152 80.9
PGSC0003DMG400009454 Solanum tuberosum HOM05D003091 ORTHO05D003671 1.1e-64 250.4 148 82.4
Lalb_Chr08g0243271 Lupinus albus HOM05D003091 ORTHO05D003671 1.8e-64 249.6 153 81.0
SEGI_37865 Sequoiadendron giganteum HOM05D003091 ORTHO05D003671 3.1e-64 248.8 152 78.9
Os05g0436400 Oryza sativa ssp. japonica HOM05D003091 ORTHO05D003671 6.9e-64 247.7 152 80.3
vmacro04023 Vaccinium macrocarpon HOM05D003091 ORTHO05D003671 1.2e-63 246.9 141 85.8
Sed0016432 Sechium edule HOM05D003091 ORTHO05D003671 1.5e-63 246.5 153 79.7
CSS0031638 Camellia sinensis var. sinensis HOM05D003091 ORTHO05D003671 2.6e-63 245.7 139 87.1
Zm00001eb209380 Zea mays HOM05D003091 ORTHO05D003671 2.6e-63 245.7 152 80.9
Zm00001eb230050 Zea mays HOM05D003091 ORTHO05D003671 5.8e-63 244.6 152 79.6
Ah.06g194480 Amaranthus hybridus HOM05D000189 ORTHO05D000474 2.2e-62 242.7 139 84.9
Lalb_Chr23g0269441 Lupinus albus HOM05D003091 ORTHO05D003671 6.4e-62 241.1 153 76.5
BolC7t43877H Brassica oleracea HOM05D003091 ORTHO05D003671 1.1e-61 240.4 142 81.7
BcaC06g34018 Brassica carinata HOM05D003091 ORTHO05D003671 1.4e-61 240.0 140 82.9
Lsat_1_v5_gn_8_26901 Lactuca sativa HOM05D003091 ORTHO05D003671 1.4e-61 240.0 153 81.0
Nitab4.5_0000730g0130 Nicotiana tabacum HOM05D003091 ORTHO05D003671 1.9e-61 239.6 138 83.3
FAN15G0484 Fragaria x ananassa HOM05D003091 ORTHO05D003671 4.2e-61 238.4 186 67.7
HPP92_020481 Vanilla planifolia HOM05D003091 ORTHO05D003671 7.8e-60 234.2 152 77.6
Cc00_g28510 Coffea canephora HOM05D003091 ORTHO05D003671 3.9e-59 231.9 131 87.8
Mapoly0057s0081 Marchantia polymorpha HOM05D003091 ORTHO05D003671 1.8e-56 223.0 150 71.3
Ca_12800_v3 Cicer arietinum L. HOM05D003091 ORTHO05D003671 3.1e-56 222.2 132 81.8
Pp3c3_24000 Physcomitrium patens HOM05D003091 ORTHO05D003671 1.2e-55 220.3 148 70.3
Pp3c3_24020 Physcomitrium patens HOM05D003091 ORTHO05D003671 1.2e-55 220.3 148 70.3
Hund21985 Selenicereus undatus HOM05D003091 ORTHO05D003671 9.9e-55 217.2 152 76.3
Duzib170G0109 Durio zibethinus HOM05D003091 ORTHO05D003671 5.3e-48 194.9 153 66.0
SMO172G0078 Selaginella moellendorffii HOM05D003091 ORTHO05D003671 1.4e-45 186.8 149 59.1
MSTRG.12444 Avicennia marina HOM05D003091 ORTHO05D003671 1.5e-42 176.8 106 83.0
MELO3C003581.2 Cucumis melo HOM05D003091 ORTHO05D003671 1.9e-37 159.8 153 55.6
Gohir.D10G151000 Gossypium hirsutum HOM05D003091 ORTHO05D003671 9.3e-37 157.5 90 88.9
Sc16g0011130 Simmondsia chinensis HOM05D003091 ORTHO05D003671 3.4e-31 139.0 152 52.0
CBR_g39566 Chara braunii HOM05D003091 ORTHO05D003671 2.2e-30 136.3 99 62.6
Cre07.g332550 Chlamydomonas reinhardtii HOM05D003091 ORTHO05D003671 3.4e-23 112.5 109 53.2
PSO063G4727 Papaver somniferum HOM05D003091 ORTHO05D003671 1.3e-22 110.5 141 51.8
PRCOL_00004266 Prasinoderma coloniale HOM05D003091 ORTHO05D003671 1.7e-17 93.6 108 48.1
Atru.chr3.2779 Acer truncatum HOM05D003091 ORTHO05D003671 8.2e-17 91.3 52 82.7
Gohir.A13G219200 Gossypium hirsutum HOM05D003091 ORTHO05D003671 2.4e-16 89.7 62 62.9
MELO3C034374.2 Cucumis melo HOM05D003091 ORTHO05D003671 6.5e-14 81.6 66 63.6
TPR.G30569 Trifolium pratense HOM05D003091 ORTHO05D003671 2.5e-13 79.7 87 49.4
Os02g0825600 Oryza sativa ssp. japonica HOM05D003091 ORTHO05D003671 2.9e-06 56.2 40 60.0


User provided reference genes

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