Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039509.1 Olea europaea HOM05D003476 ORTHO05D004057 2.4e-50 201.8 99 100.0
Oeu039001.1 Olea europaea HOM05D003476 ORTHO05D004057 9.1e-42 173.3 90 94.4
SalBow6G1938 Salvia bowleyana HOM05D003476 ORTHO05D004057 8.8e-37 156.8 91 84.6
Lj1A950T61 Lonicera japonica HOM05D003476 ORTHO05D004057 3.1e-34 148.3 92 80.4
SGA_v2.0_scaffold76G25080 Striga asiatica HOM05D003476 ORTHO05D004057 3.1e-34 148.3 90 78.9
MSTRG.8311 Avicennia marina HOM05D003476 ORTHO05D004057 1.2e-33 146.4 89 80.9
vmacro10062 Vaccinium macrocarpon HOM05D003476 ORTHO05D004057 1.6e-33 146.0 91 75.8
Migut.F01426 Erythranthe guttata HOM05D003476 ORTHO05D004057 5.9e-33 144.1 88 79.5
Actinidia13919 Actinidia chinensis HOM05D003476 ORTHO05D004057 1.3e-32 142.9 83 83.1
Lsat_1_v5_gn_5_2880 Lactuca sativa HOM05D003476 ORTHO05D004057 1.1e-31 139.8 87 77.0
Potri.010G192700 Populus trichocarpa HOM05D003476 ORTHO05D004057 1.1e-31 139.8 87 80.5
Rhsim13G0104300 Rhododendron simsii HOM05D003476 ORTHO05D004057 1.5e-31 139.4 89 75.3
unitig_747.g21420 Utricularia gibba HOM05D003476 ORTHO05D004057 1.5e-31 139.4 81 80.2
CiPaw.02G189900 Carya illinoinensis HOM05D003476 ORTHO05D004057 2.5e-31 138.7 87 79.3
HanXRQChr12g0370541 Helianthus annuus HOM05D003476 ORTHO05D004057 3.3e-31 138.3 77 84.4
Prupe.2G246300 Prunus persica HOM05D003476 ORTHO05D004057 3.3e-31 138.3 88 78.4
Gohir.D10G243900 Gossypium hirsutum HOM05D003476 ORTHO05D004057 5.6e-31 137.5 87 81.6
Cc02_g06900 Coffea canephora HOM05D003476 ORTHO05D004057 7.3e-31 137.1 95 71.6
Ciclev10032786m.g Citrus clementina HOM05D003476 ORTHO05D004057 9.5e-31 136.7 92 75.0
Nitab4.5_0003770g0040 Nicotiana tabacum HOM05D003476 ORTHO05D004057 1.2e-30 136.3 92 70.7
THA.LOC104824307 Tarenaya hassleriana HOM05D003476 ORTHO05D004057 1.2e-30 136.3 87 75.9
Thecc.10G026100 Theobroma cacao HOM05D003476 ORTHO05D004057 1.2e-30 136.3 87 78.2
TAR633G0614 Trochodendron aralioides HOM05D003476 ORTHO05D004057 1.2e-30 136.3 95 71.6
THA.LOC104810073 Tarenaya hassleriana HOM05D003476 ORTHO05D004057 1.6e-30 136.0 87 73.6
ECA238G4332 Erigeron canadensis HOM05D003476 ORTHO05D004057 2.1e-30 135.6 87 75.9
Atru.chr12.241 Acer truncatum HOM05D003476 ORTHO05D004057 2.8e-30 135.2 85 76.5
TAR636G1152 Trochodendron aralioides HOM05D003476 ORTHO05D004057 2.8e-30 135.2 86 75.6
CSS0000698 Camellia sinensis var. sinensis HOM05D003476 ORTHO05D004057 6.1e-30 134.0 92 75.0
Hma1.2p1_2137F.1_g314920 Hydrangea macrophylla HOM05D003476 ORTHO05D004057 8.0e-30 133.7 94 71.3
Manes.07G125600 Manihot esculenta HOM05D003476 ORTHO05D004057 8.0e-30 133.7 87 75.9
RcHm_v2.0_Chr1g0369421 Rosa chinensis HOM05D003476 ORTHO05D004057 8.0e-30 133.7 88 73.9
AL4G37540 Arabidopsis lyrata HOM05D003476 ORTHO05D004057 1.0e-29 133.3 87 75.9
A05p06460 Brassica napus HOM05D003476 ORTHO05D004057 1.0e-29 133.3 95 69.5
PGR142G4151 Punica granatum HOM05D003476 ORTHO05D004057 1.0e-29 133.3 85 77.6
AT2G39960 Arabidopsis thaliana HOM05D003476 ORTHO05D004057 1.4e-29 132.9 87 74.7
COL.COLO4_25658 Corchorus olitorius HOM05D003476 ORTHO05D004057 1.4e-29 132.9 86 76.7
Gohir.A10G229700 Gossypium hirsutum HOM05D003476 ORTHO05D004057 1.4e-29 132.9 87 81.6
Duzib128G2055 Durio zibethinus HOM05D003476 ORTHO05D004057 1.8e-29 132.5 87 75.9
CANSAT56G1382 Cannabis sativa HOM05D003476 ORTHO05D004057 2.3e-29 132.1 89 73.0
Carub.0004s2209 Capsella rubella HOM05D003476 ORTHO05D004057 3.0e-29 131.7 87 73.6
Gohir.A13G016600 Gossypium hirsutum HOM05D003476 ORTHO05D004057 4.0e-29 131.3 87 75.9
Sp4g22270 Schrenkiella parvula HOM05D003476 ORTHO05D004057 4.0e-29 131.3 87 73.6
GSVIVG01016365001 Vitis vinifera HOM05D003476 ORTHO05D004057 4.0e-29 131.3 79 79.7
Potri.008G064700 Populus trichocarpa HOM05D003476 ORTHO05D004057 5.2e-29 131.0 78 80.8
CARHR134890 Cardamine hirsuta HOM05D003476 ORTHO05D004057 6.8e-29 130.6 88 73.9
FAN03G0251 Fragaria x ananassa HOM05D003476 ORTHO05D004057 6.8e-29 130.6 78 78.2
Gohir.D13G017700 Gossypium hirsutum HOM05D003476 ORTHO05D004057 6.8e-29 130.6 87 75.9
HanXRQChr08g0222281 Helianthus annuus HOM05D003476 ORTHO05D004057 6.8e-29 130.6 76 77.6
TWI09G0086 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 6.8e-29 130.6 76 78.9
TWI23G0971 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 6.8e-29 130.6 76 78.9
CiPaw.01G295800 Carya illinoinensis HOM05D003476 ORTHO05D004057 1.2e-28 129.8 87 75.9
Solyc04g072032.1 Solanum lycopersicum HOM05D003476 ORTHO05D004057 1.2e-28 129.8 83 77.1
Sopen04g028030 Solanum pennellii HOM05D003476 ORTHO05D004057 1.2e-28 129.8 80 77.5
VMungo0647G2503 Vigna mungo HOM05D003476 ORTHO05D004057 1.2e-28 129.8 81 75.3
MD15G1038100 Malus domestica HOM05D003476 ORTHO05D004057 1.5e-28 129.4 90 67.8
PGSC0003DMG400025078 Solanum tuberosum HOM05D003476 ORTHO05D004057 1.5e-28 129.4 78 80.8
arahy.Tifrunner.gnm1.ann1.7TWC5I Arachis hypogaea HOM05D003476 ORTHO05D004057 2.0e-28 129.0 79 77.2
arahy.Tifrunner.gnm1.ann1.C86U5P Arachis hypogaea HOM05D003476 ORTHO05D004057 2.0e-28 129.0 79 77.2
BcaB02g09065 Brassica carinata HOM05D003476 ORTHO05D004057 2.0e-28 129.0 88 70.5
A04p30180 Brassica napus HOM05D003476 ORTHO05D004057 2.0e-28 129.0 88 69.3
BcaC01g05451 Brassica carinata HOM05D003476 ORTHO05D004057 2.6e-28 128.6 88 72.7
C03p26520 Brassica napus HOM05D003476 ORTHO05D004057 2.6e-28 128.6 88 72.7
BraA03t11468Z Brassica rapa HOM05D003476 ORTHO05D004057 2.6e-28 128.6 88 71.6
Haze_17184 Corylus avellana HOM05D003476 ORTHO05D004057 2.6e-28 128.6 86 72.1
Sed0008497 Sechium edule HOM05D003476 ORTHO05D004057 2.6e-28 128.6 80 72.5
ClCG07G004000 Citrullus lanatus HOM05D003476 ORTHO05D004057 3.4e-28 128.3 79 74.7
ClCG07G004010 Citrullus lanatus HOM05D003476 ORTHO05D004057 3.4e-28 128.3 79 74.7
Nitab4.5_0000099g0220 Nicotiana tabacum HOM05D003476 ORTHO05D004057 3.4e-28 128.3 84 72.6
Sabra08G0047500 Salix brachista HOM05D003476 ORTHO05D004057 3.4e-28 128.3 86 75.6
BcaB06g29118 Brassica carinata HOM05D003476 ORTHO05D004057 4.4e-28 127.9 88 69.3
FAN06G4561 Fragaria x ananassa HOM05D003476 ORTHO05D004057 4.4e-28 127.9 77 77.9
Eucgr.G03033 Eucalyptus grandis HOM05D003476 ORTHO05D004057 5.7e-28 127.5 79 78.5
Sed0009203 Sechium edule HOM05D003476 ORTHO05D004057 5.7e-28 127.5 81 70.4
FvH4_7g24030 Fragaria vesca HOM05D003476 ORTHO05D004057 7.5e-28 127.1 76 78.9
FAN01G1497 Fragaria x ananassa HOM05D003476 ORTHO05D004057 7.5e-28 127.1 76 78.9
Sc06g0000400 Simmondsia chinensis HOM05D003476 ORTHO05D004057 7.5e-28 127.1 77 76.6
CAN.G1252.7 Capsicum annuum HOM05D003476 ORTHO05D004057 1.3e-27 126.3 80 73.8
Cfa001366 Carpinus fangiana HOM05D003476 ORTHO05D004057 1.3e-27 126.3 86 70.9
MD08G1058400 Malus domestica HOM05D003476 ORTHO05D004057 1.3e-27 126.3 90 66.7
BcaB01g03582 Brassica carinata HOM05D003476 ORTHO05D004057 1.7e-27 125.9 88 70.5
A03p22400 Brassica napus HOM05D003476 ORTHO05D004057 1.7e-27 125.9 87 72.4
Thhalv10017265m.g Eutrema salsugineum HOM05D003476 ORTHO05D004057 1.7e-27 125.9 88 72.7
Glyma.02G254500 Glycine max HOM05D003476 ORTHO05D004057 1.7e-27 125.9 78 76.9
Gorai.013G019600 Gossypium raimondii HOM05D003476 ORTHO05D004057 1.7e-27 125.9 86 74.4
Phvul.008G226300 Phaseolus vulgaris HOM05D003476 ORTHO05D004057 1.7e-27 125.9 78 76.9
Prupe.1G392100 Prunus persica HOM05D003476 ORTHO05D004057 1.7e-27 125.9 88 69.3
BcaC02g07386 Brassica carinata HOM05D003476 ORTHO05D004057 2.2e-27 125.6 88 68.2
BolC4t28272H Brassica oleracea HOM05D003476 ORTHO05D004057 2.2e-27 125.6 88 68.2
MBI16_g26377_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 2.2e-27 125.6 94 61.7
Manes.10G017601 Manihot esculenta HOM05D003476 ORTHO05D004057 2.2e-27 125.6 78 79.5
TWI53G1335 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 2.2e-27 125.6 76 73.7
DCAR_011789 Daucus carota HOM05D003476 ORTHO05D004057 2.9e-27 125.2 73 83.6
Gorai.011G280300 Gossypium raimondii HOM05D003476 ORTHO05D004057 3.7e-27 124.8 81 81.5
TAR636G3666 Trochodendron aralioides HOM05D003476 ORTHO05D004057 3.7e-27 124.8 79 75.9
TWI73G1058 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 4.9e-27 124.4 76 76.3
Glyma.14G061900 Glycine max HOM05D003476 ORTHO05D004057 6.4e-27 124.0 78 76.9
MD01G1147400 Malus domestica HOM05D003476 ORTHO05D004057 6.4e-27 124.0 85 71.8
Cpa.g.c40050 Carica papaya HOM05D003476 ORTHO05D004057 8.3e-27 123.6 75 77.3
Medtr5g081900 Medicago truncatula HOM05D003476 ORTHO05D004057 8.3e-27 123.6 79 70.9
FAN15G1698 Fragaria x ananassa HOM05D003476 ORTHO05D004057 1.1e-26 123.2 79 72.2
LjContig00357g0022102 Lotus japonicus HOM05D003476 ORTHO05D004057 1.4e-26 122.9 78 74.4
LjContig00357g0025168 Lotus japonicus HOM05D003476 ORTHO05D004057 1.4e-26 122.9 78 73.1
TPR.G8041 Trifolium pratense HOM05D003476 ORTHO05D004057 1.4e-26 122.9 78 73.1
TWI73G1048 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 1.4e-26 122.9 76 75.0
EL10Ac2g04131 Beta vulgaris HOM05D003476 ORTHO05D004057 1.8e-26 122.5 78 74.4
Nn5g27487 Nelumbo nucifera HOM05D003476 ORTHO05D004057 1.8e-26 122.5 92 67.4
Duzib106G0197 Durio zibethinus HOM05D003476 ORTHO05D004057 2.4e-26 122.1 80 70.0
RcHm_v2.0_Chr6g0299621 Rosa chinensis HOM05D003476 ORTHO05D004057 2.4e-26 122.1 86 68.6
Actinidia00934 Actinidia chinensis HOM05D003476 ORTHO05D004057 5.4e-26 120.9 74 81.1
Ca_05932_v3 Cicer arietinum L. HOM05D003476 ORTHO05D004057 5.4e-26 120.9 78 71.8
CARHR253320 Cardamine hirsuta HOM05D003476 ORTHO05D004057 7.0e-26 120.6 88 67.0
AL6G47820 Arabidopsis lyrata HOM05D003476 ORTHO05D004057 1.6e-25 119.4 88 67.0
Carub.0006s3211 Capsella rubella HOM05D003476 ORTHO05D004057 2.0e-25 119.0 88 65.9
Hma1.2p1_0710F.1_g207290 Hydrangea macrophylla HOM05D003476 ORTHO05D004057 2.7e-25 118.6 93 69.9
Peaxi162Scf00360g00616 Petunia axillaris HOM05D003476 ORTHO05D004057 5.9e-25 117.5 75 74.7
Sp6g04580 Schrenkiella parvula HOM05D003476 ORTHO05D004057 5.9e-25 117.5 86 65.1
vmacro06993 Vaccinium macrocarpon HOM05D003476 ORTHO05D004057 1.3e-24 116.3 72 76.4
HPP92_016193 Vanilla planifolia HOM05D003476 ORTHO05D004057 1.3e-24 116.3 76 71.1
Thhalv10028970m.g Eutrema salsugineum HOM05D003476 ORTHO05D004057 3.9e-24 114.8 81 67.9
PSO801G0598 Papaver somniferum HOM05D003476 ORTHO05D004057 5.0e-24 114.4 76 71.1
PSO339G6737 Papaver somniferum HOM05D003476 ORTHO05D004057 6.6e-24 114.0 76 71.1
Aqoxy214s003 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 8.6e-24 113.6 69 76.8
Aqoxy4G02660 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 8.6e-24 113.6 74 71.6
Nn2g13624 Nelumbo nucifera HOM05D003476 ORTHO05D004057 1.1e-23 113.2 79 69.6
MELO3C025156.2 Cucumis melo HOM05D003476 ORTHO05D004057 1.9e-23 112.5 72 70.8
ATR0618G113 Amborella trichopoda HOM05D003476 ORTHO05D004057 1.6e-22 109.4 83 63.9
Os04g0446300 Oryza sativa ssp. japonica HOM05D003476 ORTHO05D004057 6.2e-22 107.5 75 64.0
Zm00001eb081650 Zea mays HOM05D003476 ORTHO05D004057 8.0e-22 107.1 74 64.9
SEGI_14870 Sequoiadendron giganteum HOM05D003476 ORTHO05D004057 1.4e-21 106.3 83 60.2
Os02g0565200 Oryza sativa ssp. japonica HOM05D003476 ORTHO05D004057 2.0e-20 102.4 73 63.0
BraA05t19614Z Brassica rapa HOM05D003476 ORTHO05D004057 7.5e-20 100.5 75 66.7
Mapoly0043s0045 Marchantia polymorpha HOM05D003476 ORTHO05D004057 9.8e-20 100.1 84 54.8
Pp3c24_20710 Physcomitrium patens HOM05D003476 ORTHO05D004057 2.4e-18 95.5 76 60.5
SpUn0110_0020 Schrenkiella parvula HOM05D003476 ORTHO05D004057 4.1e-18 94.7 71 63.4
AT4G04200 Arabidopsis thaliana HOM05D003476 ORTHO05D004057 1.2e-17 93.2 72 66.7
Pp3c8_24950 Physcomitrium patens HOM05D003476 ORTHO05D004057 2.7e-17 92.0 76 57.9
MBI14_g25462_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 7.8e-17 90.5 68 69.1
MBI14_g30458_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 7.8e-17 90.5 68 69.1
Aa31LG5G19650 Aethionema arabicum HOM05D003476 ORTHO05D004057 2.3e-16 89.0 72 61.1
CsaV3_5G008920 Cucumis sativus L. HOM05D003476 ORTHO05D004057 6.6e-16 87.4 63 61.9
MBI16_g28612_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 6.6e-16 87.4 84 53.6
Ah.10g035550 Amaranthus hybridus HOM05D003476 ORTHO05D004057 1.1e-15 86.7 61 63.9
AUR62031591 Chenopodium quinoa HOM05D003476 ORTHO05D004057 1.1e-15 86.7 61 67.2
Duzib114G0190 Durio zibethinus HOM05D003476 ORTHO05D004057 1.5e-15 86.3 62 74.2
BolC4t22371H Brassica oleracea HOM05D003476 ORTHO05D004057 2.5e-15 85.5 68 63.2
AUR62012465 Chenopodium quinoa HOM05D003476 ORTHO05D004057 4.3e-15 84.7 53 75.5
C04p07540 Brassica napus HOM05D003476 ORTHO05D004057 5.6e-15 84.3 68 61.8
ECA233G2895 Erigeron canadensis HOM05D003476 ORTHO05D004057 4.0e-13 78.2 51 72.5
Ah.16g104950 Amaranthus hybridus HOM05D003476 ORTHO05D004057 5.2e-13 77.8 61 59.0
C04p67700 Brassica napus HOM05D003476 ORTHO05D004057 1.2e-12 76.6 62 61.3
AagrBONN_evm.TU.Sc2ySwM_228.5500 Anthoceros agrestis HOM05D003476 ORTHO05D004057 1.5e-12 76.3 77 45.5
Migut.F01424 Erythranthe guttata HOM05D003476 ORTHO05D004057 2.0e-12 75.9 41 85.4
MBI14_g06613_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 2.2e-11 72.4 44 75.0
MD07G1214300 Malus domestica HOM05D003476 ORTHO05D004057 4.9e-11 71.2 41 78.0
Sc09g0010500 Simmondsia chinensis HOM05D003476 ORTHO05D004057 3.2e-10 68.6 40 80.0
Psat2g035640 Pisum sativum HOM05D003476 ORTHO05D004057 9.2e-10 67.0 42 71.4
Sabra10G0148300 Salix brachista HOM05D003476 ORTHO05D004057 9.2e-10 67.0 48 68.8
Hund03462 Selenicereus undatus HOM05D003476 ORTHO05D004057 1.6e-09 66.2 40 70.0
Aqoxy2G00973 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 2.1e-09 65.9 67 55.2
Dinv34422 Davidia involucrata HOM05D002885 ORTHO05D003350 4.6e-09 64.7 46 71.7
CDE04G3620 Ceratophyllum demersum HOM05D003476 ORTHO05D004057 2.3e-08 62.4 40 75.0
CDE03G0334 Ceratophyllum demersum HOM05D003476 ORTHO05D004057 3.0e-08 62.0 38 73.7
Cre12.g524200 Chlamydomonas reinhardtii HOM05D003476 ORTHO05D004057 5.1e-08 61.2 85 41.2
FvH4_2g40940 Fragaria vesca HOM05D003476 ORTHO05D004057 8.6e-08 60.5 79 43.0
Aa31LG9G9900 Aethionema arabicum HOM05D002056 ORTHO05D002289 3.3e-07 58.5 35 77.1
Medtr8g093950 Medicago truncatula HOM05D003476 ORTHO05D004057 5.6e-07 57.8 43 69.8
Rhsim03G0140200 Rhododendron simsii HOM05D003476 ORTHO05D004057 7.3e-07 57.4 55 50.9
PRCOL_00000631 Prasinoderma coloniale HOM05D003476 ORTHO05D004057 2.1e-06 55.8 71 42.3


User provided reference genes

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