Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039423.1 Olea europaea HOM05D001166 ORTHO05D000992 6.3e-58 227.3 117 100.0
Prupe.1G343800 Prunus persica HOM05D001166 ORTHO05D000992 4.9e-18 94.7 118 52.5
Lj3g0012955 Lotus japonicus HOM05D001166 ORTHO05D000992 1.4e-17 93.2 121 48.8
MD16G1006900 Malus domestica HOM05D001166 ORTHO05D000992 3.5e-16 88.6 118 50.0
Phvul.011G032900 Phaseolus vulgaris HOM05D001166 ORTHO05D000992 3.5e-16 88.6 122 48.4
Solyc01g011350.3 Solanum lycopersicum HOM05D001166 ORTHO05D000992 3.5e-16 88.6 131 48.9
Sopen01g007380 Solanum pennellii HOM05D001166 ORTHO05D000992 3.5e-16 88.6 131 48.9
CAN.G59.2 Capsicum annuum HOM05D001166 ORTHO05D000992 4.6e-16 88.2 128 49.2
Lj3A852T51 Lonicera japonica HOM05D001166 ORTHO05D000992 4.6e-16 88.2 118 51.7
SalBow2G0753 Salvia bowleyana HOM05D001166 ORTHO05D000992 6.0e-16 87.8 121 52.1
PGSC0003DMG400005305 Solanum tuberosum HOM05D001166 ORTHO05D000992 6.0e-16 87.8 127 50.4
arahy.Tifrunner.gnm1.ann1.6PC78S Arachis hypogaea HOM05D001166 ORTHO05D000992 1.3e-15 86.7 123 48.8
arahy.Tifrunner.gnm1.ann1.ACP295 Arachis hypogaea HOM05D001166 ORTHO05D000992 1.3e-15 86.7 123 48.8
Haze_01544 Corylus avellana HOM05D001166 ORTHO05D000992 2.3e-15 85.9 123 47.2
arahy.Tifrunner.gnm1.ann1.1H2TTJ Arachis hypogaea HOM05D001166 ORTHO05D000992 3.0e-15 85.5 123 48.0
VMungo1127G0199 Vigna mungo HOM05D001166 ORTHO05D000992 3.0e-15 85.5 103 50.5
CAN.G194.24 Capsicum annuum HOM05D001166 ORTHO05D000992 3.9e-15 85.1 131 45.0
DCAR_030342 Daucus carota HOM05D001166 ORTHO05D000992 5.1e-15 84.7 123 46.3
MSTRG.2080 Avicennia marina HOM05D001166 ORTHO05D000992 6.6e-15 84.3 80 62.5
Glyma.12G029900 Glycine max HOM05D001166 ORTHO05D000992 6.6e-15 84.3 117 46.2
Cfa015130 Carpinus fangiana HOM05D001166 ORTHO05D000992 8.6e-15 84.0 123 47.2
Nitab4.5_0015447g0010 Nicotiana tabacum HOM05D001166 ORTHO05D000992 1.5e-14 83.2 129 46.5
Ca_03051_v3 Cicer arietinum L. HOM05D001166 ORTHO05D000992 1.9e-14 82.8 119 50.4
Atru.chr11.1094 Acer truncatum HOM05D001166 ORTHO05D000992 2.5e-14 82.4 117 47.0
Glyma.11G104900 Glycine max HOM05D001166 ORTHO05D000992 2.5e-14 82.4 115 46.1
MD13G1008900 Malus domestica HOM05D001166 ORTHO05D000992 2.5e-14 82.4 109 50.5
EL10Ac9g22866 Beta vulgaris HOM05D001166 ORTHO05D000992 3.3e-14 82.0 123 47.2
Migut.L00783 Erythranthe guttata HOM05D001166 ORTHO05D000992 3.3e-14 82.0 118 52.5
FAN17G1357 Fragaria x ananassa HOM05D001166 ORTHO05D000992 3.3e-14 82.0 120 46.7
PGSC0003DMG401026765 Solanum tuberosum HOM05D001166 ORTHO05D000992 4.3e-14 81.6 125 46.4
FAN22G0469 Fragaria x ananassa HOM05D001166 ORTHO05D000992 9.5e-14 80.5 122 45.1
AUR62015162 Chenopodium quinoa HOM05D001166 ORTHO05D000992 1.6e-13 79.7 123 45.5
AUR62017614 Chenopodium quinoa HOM05D001166 ORTHO05D000992 1.6e-13 79.7 123 45.5
FAN07G1414 Fragaria x ananassa HOM05D001166 ORTHO05D000992 2.1e-13 79.3 124 44.4
Lalb_Chr01g0001641 Lupinus albus HOM05D001166 ORTHO05D000992 2.1e-13 79.3 117 45.3
Solyc04g008690.3 Solanum lycopersicum HOM05D001166 ORTHO05D000992 2.8e-13 79.0 126 46.0
Sopen04g003860 Solanum pennellii HOM05D001166 ORTHO05D000992 2.8e-13 79.0 126 46.0
MSTRG.13666 Avicennia marina HOM05D001166 ORTHO05D000992 3.6e-13 78.6 80 55.0
CiPaw.06G057300 Carya illinoinensis HOM05D001166 ORTHO05D000992 4.7e-13 78.2 105 47.6
RcHm_v2.0_Chr4g0446241 Rosa chinensis HOM05D001166 ORTHO05D000992 4.7e-13 78.2 127 43.3
Manes.07G075900 Manihot esculenta HOM05D001166 ORTHO05D000992 1.1e-12 77.0 119 47.9
Potri.010G097000 Populus trichocarpa HOM05D001166 ORTHO05D000992 1.1e-12 77.0 135 46.7
Sc15g0002450 Simmondsia chinensis HOM05D001166 ORTHO05D000992 1.1e-12 77.0 117 49.6
vmacro10767 Vaccinium macrocarpon HOM05D001166 ORTHO05D000992 1.1e-12 77.0 123 47.2
TPR.G14836 Trifolium pratense HOM05D001166 ORTHO05D000992 1.8e-12 76.3 117 42.7
CiPaw.05G166200 Carya illinoinensis HOM05D001166 ORTHO05D000992 3.1e-12 75.5 123 45.5
ECA246G0438 Erigeron canadensis HOM05D001166 ORTHO05D000992 4.0e-12 75.1 118 43.2
Hma1.2p1_0122F.1_g057580 Hydrangea macrophylla HOM05D001166 ORTHO05D000992 4.0e-12 75.1 118 47.5
Hund08338 Selenicereus undatus HOM05D001166 ORTHO05D000992 4.0e-12 75.1 115 45.2
GSVIVG01010225001 Vitis vinifera HOM05D001166 ORTHO05D000992 4.0e-12 75.1 80 55.0
Hund24257 Selenicereus undatus HOM05D001166 ORTHO05D000992 5.2e-12 74.7 118 45.8
CANSAT78G1388 Cannabis sativa HOM05D001166 ORTHO05D000992 6.8e-12 74.3 118 40.7
FvH4_4g36480 Fragaria vesca HOM05D001166 ORTHO05D000992 6.8e-12 74.3 124 41.9
FAN12G3346 Fragaria x ananassa HOM05D001166 ORTHO05D000992 6.8e-12 74.3 124 41.9
Medtr1g035700 Medicago truncatula HOM05D001166 ORTHO05D000992 6.8e-12 74.3 118 43.2
Nitab4.5_0001419g0080 Nicotiana tabacum HOM05D001166 ORTHO05D000992 6.8e-12 74.3 124 44.4
unitig_699.g19642 Utricularia gibba HOM05D001166 ORTHO05D000992 8.9e-12 73.9 55 70.9
Ah.01g013240 Amaranthus hybridus HOM05D001166 ORTHO05D000992 1.2e-11 73.6 118 42.4
Gohir.A13G026500 Gossypium hirsutum HOM05D001166 ORTHO05D000992 1.2e-11 73.6 51 70.6
Gohir.D13G025300 Gossypium hirsutum HOM05D001166 ORTHO05D000992 1.2e-11 73.6 51 70.6
Gorai.013G028500 Gossypium raimondii HOM05D001166 ORTHO05D000992 1.2e-11 73.6 51 70.6
Psat7g174600 Pisum sativum HOM05D001166 ORTHO05D000992 1.2e-11 73.6 116 42.2
Sabra10G0069500 Salix brachista HOM05D001166 ORTHO05D000992 1.5e-11 73.2 91 53.8
Thecc.02G310400 Theobroma cacao HOM05D001166 ORTHO05D000992 1.5e-11 73.2 118 44.9
Lsat_1_v5_gn_3_34220 Lactuca sativa HOM05D001166 ORTHO05D000992 2.0e-11 72.8 118 39.8
Psat6g098440 Pisum sativum HOM05D001166 ORTHO05D000992 2.0e-11 72.8 119 42.0
Duzib251G0546 Durio zibethinus HOM05D001166 ORTHO05D000992 2.6e-11 72.4 118 43.2
Migut.E00602 Erythranthe guttata HOM05D001166 ORTHO05D000992 3.4e-11 72.0 121 43.0
Rhsim09G0077500 Rhododendron simsii HOM05D001166 ORTHO05D000992 3.4e-11 72.0 123 43.1
HanXRQChr17g0565521 Helianthus annuus HOM05D001166 ORTHO05D000992 4.4e-11 71.6 115 45.2
Lalb_Chr03g0024981 Lupinus albus HOM05D001166 ORTHO05D000992 4.4e-11 71.6 118 44.1
QL03p042949 Quercus lobata HOM05D001166 ORTHO05D000992 4.4e-11 71.6 111 45.9
Actinidia04100 Actinidia chinensis HOM05D001166 ORTHO05D000992 5.8e-11 71.2 123 42.3
unitig_52.g17302 Utricularia gibba HOM05D001166 ORTHO05D000992 5.8e-11 71.2 78 53.8
Nitab4.5_0000069g0050 Nicotiana tabacum HOM05D001166 ORTHO05D000992 7.5e-11 70.9 126 40.5
Gorai.005G151600 Gossypium raimondii HOM05D001166 ORTHO05D000992 9.9e-11 70.5 119 42.9
Lj6C722G8 Lonicera japonica HOM05D001166 ORTHO05D000992 9.9e-11 70.5 89 50.6
Nitab4.5_0000129g0250 Nicotiana tabacum HOM05D001166 ORTHO05D000992 9.9e-11 70.5 123 43.1
Glyma.09G281000 Glycine max HOM05D001166 ORTHO05D000992 1.7e-10 69.7 112 39.3
Actinidia11791 Actinidia chinensis HOM05D001166 ORTHO05D000992 2.2e-10 69.3 124 42.7
Duzib268G1700 Durio zibethinus HOM05D001166 ORTHO05D000992 2.2e-10 69.3 49 71.4
Sed0027739 Sechium edule HOM05D001166 ORTHO05D000992 2.2e-10 69.3 123 41.5
Migut.E00662 Erythranthe guttata HOM05D001166 ORTHO05D000992 2.9e-10 68.9 116 43.1
HanXRQChr08g0209291 Helianthus annuus HOM05D001166 ORTHO05D000992 2.9e-10 68.9 123 43.1
ClCG01G007070 Citrullus lanatus HOM05D001166 ORTHO05D000992 4.9e-10 68.2 121 43.0
COL.COLO4_27649 Corchorus olitorius HOM05D001166 ORTHO05D000992 4.9e-10 68.2 117 40.2
Gohir.D02G135600 Gossypium hirsutum HOM05D001166 ORTHO05D000992 4.9e-10 68.2 119 42.0
PGR031G3992 Punica granatum HOM05D001166 ORTHO05D000992 6.4e-10 67.8 64 60.9
SGA_v2.0_scaffold65G22210 Striga asiatica HOM05D001166 ORTHO05D000992 6.4e-10 67.8 116 42.2
Cc11_g00010 Coffea canephora HOM05D001166 ORTHO05D000992 8.3e-10 67.4 40 82.5
Lsat_1_v5_gn_4_26281 Lactuca sativa HOM05D001166 ORTHO05D000992 8.3e-10 67.4 120 40.0
SalBow2G0002 Salvia bowleyana HOM05D001166 ORTHO05D000992 1.1e-09 67.0 75 52.0
THA.LOC104808054 Tarenaya hassleriana HOM05D001166 ORTHO05D000992 1.1e-09 67.0 104 43.3
CsaV3_5G017490 Cucumis sativus L. HOM05D001166 ORTHO05D000992 1.4e-09 66.6 121 43.0
MELO3C005207.2 Cucumis melo HOM05D001166 ORTHO05D000992 1.9e-09 66.2 121 42.1
Peaxi162Scf00315g00026 Petunia axillaris HOM05D001166 ORTHO05D000992 1.9e-09 66.2 110 41.8
Gohir.A03G111000 Gossypium hirsutum HOM05D001166 ORTHO05D000992 3.2e-09 65.5 82 47.6
Manes.10G068800 Manihot esculenta HOM05D001166 ORTHO05D000992 3.2e-09 65.5 119 42.9
DCAR_023503 Daucus carota HOM05D001166 ORTHO05D000992 4.1e-09 65.1 117 42.7
Gorai.008G171100 Gossypium raimondii HOM05D001166 ORTHO05D000992 4.1e-09 65.1 109 43.1
Potri.008G145100 Populus trichocarpa HOM05D001166 ORTHO05D000992 4.1e-09 65.1 33 90.9
Glyma.20G005200 Glycine max HOM05D001166 ORTHO05D000992 5.4e-09 64.7 112 36.6
TPR.G21569 Trifolium pratense HOM05D001166 ORTHO05D000992 5.4e-09 64.7 118 39.8
TWI77G0708 Tripterygium wilfordii HOM05D001166 ORTHO05D000992 5.4e-09 64.7 124 44.4
Ciclev10005493m.g Citrus clementina HOM05D001166 ORTHO05D000992 7.1e-09 64.3 102 47.1
Ca_12511_v3 Cicer arietinum L. HOM05D001166 ORTHO05D000992 1.2e-08 63.5 121 43.0
ECA234G1877 Erigeron canadensis HOM05D001166 ORTHO05D000992 1.2e-08 63.5 118 42.4
Gohir.A12G155200 Gossypium hirsutum HOM05D001166 ORTHO05D000992 1.2e-08 63.5 109 42.2
Gohir.D12G158300 Gossypium hirsutum HOM05D001166 ORTHO05D000992 1.2e-08 63.5 109 42.2
Lalb_Chr10g0095101 Lupinus albus HOM05D001166 ORTHO05D000992 1.2e-08 63.5 117 38.5
Lalb_Chr19g0139271 Lupinus albus HOM05D001166 ORTHO05D000992 1.6e-08 63.2 117 41.9
Medtr4g074120 Medicago truncatula HOM05D001166 ORTHO05D000992 1.6e-08 63.2 116 38.8
Peaxi162Scf00329g00514 Petunia axillaris HOM05D001166 ORTHO05D000992 1.6e-08 63.2 113 43.4
TWI74G0027 Tripterygium wilfordii HOM05D001166 ORTHO05D000992 1.6e-08 63.2 118 45.8
Aqoxy3G04230 Aquilegia oxysepala HOM05D001166 ORTHO05D000992 2.1e-08 62.8 45 68.9
Sabra08G0110100 Salix brachista HOM05D001166 ORTHO05D000992 6.0e-08 61.2 131 41.2
SGA_v2.0_scaffold80G25960 Striga asiatica HOM05D001166 ORTHO05D000992 7.8e-08 60.8 121 40.5
Lsat_1_v5_gn_8_32640 Lactuca sativa HOM05D001166 ORTHO05D000992 1.0e-07 60.5 116 41.4
Eucgr.G01993 Eucalyptus grandis HOM05D001166 ORTHO05D000992 1.7e-07 59.7 64 53.1
CDE04G0690 Ceratophyllum demersum HOM05D001166 ORTHO05D000992 3.0e-07 58.9 112 36.6
Dinv02963 Davidia involucrata HOM05D001166 ORTHO05D000992 5.1e-07 58.2 123 41.5
Cpa.g.sc2.106 Carica papaya HOM05D001166 ORTHO05D000992 6.6e-07 57.8 117 38.5
Thhalv10018953m.g Eutrema salsugineum HOM05D001166 ORTHO05D000992 8.6e-07 57.4 118 39.0
HanXRQChr17g0540641 Helianthus annuus HOM05D001166 ORTHO05D000992 8.6e-07 57.4 67 52.2
Dinv02666 Davidia involucrata HOM05D001166 ORTHO05D000992 1.1e-06 57.0 123 38.2
Dinv02667 Davidia involucrata HOM05D001166 ORTHO05D000992 1.1e-06 57.0 123 38.2
Duzib248G1020 Durio zibethinus HOM05D001166 ORTHO05D000992 1.5e-06 56.6 34 76.5
Eucgr.G02013 Eucalyptus grandis HOM05D001166 ORTHO05D000992 1.9e-06 56.2 103 37.9
PSO017G6322 Papaver somniferum HOM05D001166 ORTHO05D000992 1.9e-06 56.2 120 37.5
unitig_27.g25292 Utricularia gibba HOM05D001166 ORTHO05D000992 3.3e-06 55.5 114 37.7
ATR0618G029 Amborella trichopoda HOM05D001166 ORTHO05D000992 5.6e-06 54.7 45 62.2
Gohir.A04G144200 Gossypium hirsutum HOM05D001166 ORTHO05D000992 5.6e-06 54.7 48 56.2
Gorai.012G184000 Gossypium raimondii HOM05D001166 ORTHO05D000992 7.3e-06 54.3 48 56.2
Gohir.D04G188800 Gossypium hirsutum HOM05D001166 ORTHO05D000992 9.5e-06 53.9 48 56.2
HanXRQChr16g0526721 Helianthus annuus HOM05D001166 ORTHO05D000992 9.5e-06 53.9 73 46.6


User provided reference genes

Program Settings