Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039395.1 Olea europaea HOM05D006051 ORTHO05D008120 2.2e-171 605.5 305 100.0
Dinv34507 Davidia involucrata HOM05D006051 ORTHO05D008120 1.1e-24 118.2 107 65.4
CSS0033370 Camellia sinensis var. sinensis HOM05D006051 ORTHO05D008120 7.0e-24 115.5 104 65.4
Hma1.2p1_0264F.1_g105860 Hydrangea macrophylla HOM05D006051 ORTHO05D008120 1.2e-23 114.8 105 63.8
unitig_0.g263 Utricularia gibba HOM05D006051 ORTHO05D008120 2.6e-23 113.6 85 70.6
Nitab4.5_0012485g0010 Nicotiana tabacum HOM05D006051 ORTHO05D008120 3.5e-23 113.2 118 57.6
Nitab4.5_0000094g0030 Nicotiana tabacum HOM05D006051 ORTHO05D008120 5.9e-23 112.5 118 57.6
SGA_v2.0_scaffold42G16175 Striga asiatica HOM05D006051 ORTHO05D008120 1.0e-22 111.7 107 65.4
SGA_v2.0_scaffold121G33040 Striga asiatica HOM05D000250 ORTHO05D000625 1.3e-22 111.3 114 63.2
CAN.G174.7 Capsicum annuum HOM05D006051 ORTHO05D008120 3.8e-22 109.8 114 57.0
DCAR_018048 Daucus carota HOM05D006051 ORTHO05D008120 5.0e-22 109.4 100 60.0
Actinidia01012 Actinidia chinensis HOM05D006051 ORTHO05D008120 6.5e-22 109.0 107 58.9
Migut.F01226 Erythranthe guttata HOM05D006051 ORTHO05D008120 6.5e-22 109.0 110 58.2
Actinidia13633 Actinidia chinensis HOM05D006051 ORTHO05D008120 1.5e-21 107.8 107 63.6
Actinidia31641 Actinidia chinensis HOM05D006051 ORTHO05D008120 9.4e-21 105.1 106 60.4
Lj1A969G90 Lonicera japonica HOM05D006051 ORTHO05D008120 9.4e-21 105.1 98 57.1
FAN12G2513 Fragaria x ananassa HOM05D006051 ORTHO05D008120 2.1e-20 104.0 127 52.8
FAN12G2962 Fragaria x ananassa HOM05D006051 ORTHO05D008120 2.1e-20 104.0 127 52.8
vmacro06909 Vaccinium macrocarpon HOM05D006051 ORTHO05D008120 2.7e-20 103.6 104 55.8
PGSC0003DMG400027595 Solanum tuberosum HOM05D006051 ORTHO05D008120 3.6e-20 103.2 112 53.6
Solyc06g048540.3 Solanum lycopersicum HOM05D006051 ORTHO05D008120 8.0e-20 102.1 112 53.6
Peaxi162Scf00304g00081 Petunia axillaris HOM05D006051 ORTHO05D008120 1.8e-19 100.9 116 54.3
FAN04G2808 Fragaria x ananassa HOM05D006051 ORTHO05D008120 2.3e-19 100.5 127 52.0
Potri.008G012500 Populus trichocarpa HOM05D006051 ORTHO05D008120 3.0e-19 100.1 121 54.5
Cc02_g05120 Coffea canephora HOM05D006051 ORTHO05D008120 4.0e-19 99.8 121 47.9
MSTRG.157 Avicennia marina HOM05D006051 ORTHO05D008120 5.2e-19 99.4 110 56.4
Lsat_1_v5_gn_8_11321 Lactuca sativa HOM05D006051 ORTHO05D008120 5.2e-19 99.4 105 56.2
Sopen06g014710 Solanum pennellii HOM05D006051 ORTHO05D008120 5.2e-19 99.4 110 52.7
Aqoxy2G00667 Aquilegia oxysepala HOM05D006051 ORTHO05D008120 1.5e-18 97.8 100 57.0
FvH4_4g11580 Fragaria vesca HOM05D006051 ORTHO05D008120 1.5e-18 97.8 121 52.9
MBI01_g45162_MAGBIO Magnolia biondii HOM05D006051 ORTHO05D008120 1.5e-18 97.8 106 57.5
Nitab4.5_0000171g0370 Nicotiana tabacum HOM05D001426 ORTHO05D001389 2.0e-18 97.4 71 73.2
TAR636G2651 Trochodendron aralioides HOM05D006051 ORTHO05D008120 3.3e-18 96.7 107 56.1
Sed0004519 Sechium edule HOM05D006051 ORTHO05D008120 9.7e-18 95.1 117 51.3
Sabra08G0007800 Salix brachista HOM05D006051 ORTHO05D008120 1.3e-17 94.7 121 52.9
SalBow4G2472 Salvia bowleyana HOM05D006051 ORTHO05D008120 1.3e-17 94.7 109 53.2
HanXRQChr08g0221681 Helianthus annuus HOM05D006051 ORTHO05D008120 1.7e-17 94.4 107 53.3
FAN07G0692 Fragaria x ananassa HOM05D006051 ORTHO05D008120 2.2e-17 94.0 121 52.9
TAR633G1896 Trochodendron aralioides HOM05D006051 ORTHO05D008120 2.2e-17 94.0 101 55.4
ClCG06G013410 Citrullus lanatus HOM05D006051 ORTHO05D008120 2.8e-17 93.6 128 46.9
GSVIVG01036588001 Vitis vinifera HOM05D006051 ORTHO05D008120 3.7e-17 93.2 94 60.6
ECA233G2097 Erigeron canadensis HOM05D006051 ORTHO05D008120 1.1e-16 91.7 124 46.8
MD07G1059800 Malus domestica HOM05D006051 ORTHO05D008120 1.4e-16 91.3 78 62.8
Nn5g26807 Nelumbo nucifera HOM05D006051 ORTHO05D008120 1.8e-16 90.9 105 53.3
EL10Ac4g08746 Beta vulgaris HOM05D006051 ORTHO05D008120 2.4e-16 90.5 133 50.4
CiPaw.13G045900 Carya illinoinensis HOM05D006051 ORTHO05D008120 2.4e-16 90.5 92 58.7
AUR62034153 Chenopodium quinoa HOM05D006051 ORTHO05D008120 3.1e-16 90.1 94 57.4
PGR044G2135 Punica granatum HOM05D006051 ORTHO05D008120 3.1e-16 90.1 108 53.7
RcHm_v2.0_Chr6g0244501 Rosa chinensis HOM05D006051 ORTHO05D008120 1.6e-15 87.8 73 65.8
QL04p049349 Quercus lobata HOM05D006051 ORTHO05D008120 2.0e-15 87.4 124 50.8
CDE07G1672 Ceratophyllum demersum HOM05D006051 ORTHO05D008120 2.7e-15 87.0 105 51.4
TWI15G0662 Tripterygium wilfordii HOM05D006051 ORTHO05D008120 2.7e-15 87.0 102 55.9
Eucgr.J00305 Eucalyptus grandis HOM05D006051 ORTHO05D008120 3.5e-15 86.7 74 59.5
CDE06G2681 Ceratophyllum demersum HOM05D006051 ORTHO05D008120 5.9e-15 85.9 105 51.4
MD02G1261200 Malus domestica HOM05D006051 ORTHO05D008120 5.9e-15 85.9 67 65.7
CsaV3_1G031660 Cucumis sativus L. HOM05D006051 ORTHO05D008120 7.7e-15 85.5 118 50.0
Hund06815 Selenicereus undatus HOM05D006051 ORTHO05D008120 1.0e-14 85.1 103 53.4
MELO3C017456.2 Cucumis melo HOM05D006051 ORTHO05D008120 1.7e-14 84.3 76 65.8
Manes.07G077300 Manihot esculenta HOM05D006051 ORTHO05D008120 1.7e-14 84.3 109 55.0
AUR62014283 Chenopodium quinoa HOM05D006051 ORTHO05D008120 2.2e-14 84.0 84 60.7
COL.COLO4_16345 Corchorus olitorius HOM05D006051 ORTHO05D008120 3.8e-14 83.2 106 48.1
A05p38510 Brassica napus HOM05D000059 ORTHO05D017557 5.0e-14 82.8 82 58.5
BraA05t22642Z Brassica rapa HOM05D000059 ORTHO05D017557 5.0e-14 82.8 82 58.5
Ciclev10015923m.g Citrus clementina HOM05D006051 ORTHO05D008120 5.0e-14 82.8 126 47.6
Sc09g0004830 Simmondsia chinensis HOM05D006051 ORTHO05D008120 5.0e-14 82.8 88 53.4
Carub.0003s0990 Capsella rubella HOM05D006051 ORTHO05D008120 6.5e-14 82.4 87 59.8
Cpa.g.sc33.112 Carica papaya HOM05D006051 ORTHO05D008120 6.5e-14 82.4 85 61.2
Duzib128G1182 Durio zibethinus HOM05D006051 ORTHO05D008120 1.1e-13 81.6 121 48.8
THA.LOC104816479 Tarenaya hassleriana HOM05D006051 ORTHO05D008120 1.1e-13 81.6 78 59.0
Ah.04g163060 Amaranthus hybridus HOM05D006051 ORTHO05D008120 1.5e-13 81.3 111 47.7
C03p44320 Brassica napus HOM05D000059 ORTHO05D017557 1.5e-13 81.3 120 47.5
FAN17G1686 Fragaria x ananassa HOM05D006051 ORTHO05D008120 1.5e-13 81.3 88 56.8
FAN22G1693 Fragaria x ananassa HOM05D006051 ORTHO05D008120 1.5e-13 81.3 88 56.8
Thecc.10G124400 Theobroma cacao HOM05D006051 ORTHO05D008120 1.9e-13 80.9 108 52.8
PSO339G3490 Papaver somniferum HOM05D006051 ORTHO05D008120 2.5e-13 80.5 110 46.4
Ah.06g191760 Amaranthus hybridus HOM05D001282 ORTHO05D008120 3.2e-13 80.1 107 48.6
CiPaw.14G036600 Carya illinoinensis HOM05D006051 ORTHO05D008120 3.2e-13 80.1 51 76.5
BolC3t16702H Brassica oleracea HOM05D000059 ORTHO05D017557 4.2e-13 79.7 127 44.9
Gohir.D05G287000 Gossypium hirsutum HOM05D006051 ORTHO05D008120 4.2e-13 79.7 75 54.7
Gorai.009G302000 Gossypium raimondii HOM05D006051 ORTHO05D008120 5.5e-13 79.3 75 54.7
PSO170G3597 Papaver somniferum HOM05D006051 ORTHO05D008120 5.5e-13 79.3 73 54.8
A03p36690 Brassica napus HOM05D006051 ORTHO05D008120 7.2e-13 79.0 127 44.1
BraA03t12832Z Brassica rapa HOM05D000059 ORTHO05D017557 7.2e-13 79.0 127 44.1
Gohir.A05G285900 Gossypium hirsutum HOM05D006051 ORTHO05D008120 7.2e-13 79.0 110 45.5
arahy.Tifrunner.gnm1.ann1.LULC1Z Arachis hypogaea HOM05D006051 ORTHO05D008120 9.4e-13 78.6 93 51.6
C05p57410 Brassica napus HOM05D000059 ORTHO05D017557 9.4e-13 78.6 82 56.1
BolC5t34397H Brassica oleracea HOM05D000059 ORTHO05D017557 9.4e-13 78.6 82 56.1
PSO384G3752 Papaver somniferum HOM05D006051 ORTHO05D008120 9.4e-13 78.6 109 45.0
Sp3g08990 Schrenkiella parvula HOM05D006051 ORTHO05D008120 9.4e-13 78.6 87 55.2
arahy.Tifrunner.gnm1.ann1.CDC39Z Arachis hypogaea HOM05D006051 ORTHO05D008120 1.6e-12 77.8 93 53.8
CARHR085250 Cardamine hirsuta HOM05D006051 ORTHO05D008120 1.6e-12 77.8 87 56.3
Cfa010484 Carpinus fangiana HOM05D006051 ORTHO05D008120 1.6e-12 77.8 94 54.3
AagrBONN_evm.TU.Sc2ySwM_344.3763 Anthoceros agrestis HOM05D006051 ORTHO05D008120 2.7e-12 77.0 70 54.3
MCO01G258 Micromonas commoda HOM05D006051 ORTHO05D008120 2.7e-12 77.0 64 57.8
HPP92_012540 Vanilla planifolia HOM05D006051 ORTHO05D008120 2.7e-12 77.0 112 42.9
ATR1127G151 Amborella trichopoda HOM05D006051 ORTHO05D008120 3.6e-12 76.6 114 44.7
AT3G10670 Arabidopsis thaliana HOM05D006051 ORTHO05D008120 3.6e-12 76.6 86 58.1
Thhalv10021097m.g Eutrema salsugineum HOM05D006051 ORTHO05D008120 3.6e-12 76.6 79 55.7
BcaB02g11028 Brassica carinata HOM05D006051 ORTHO05D017557 4.7e-12 76.3 65 63.1
Aa31LG3G3530 Aethionema arabicum HOM05D006051 ORTHO05D008120 6.1e-12 75.9 125 44.8
AL3G22140 Arabidopsis lyrata HOM05D006051 ORTHO05D008120 6.1e-12 75.9 47 78.7
BcaC05g29439 Brassica carinata HOM05D000059 ORTHO05D017557 6.1e-12 75.9 132 42.4
HPP92_012571 Vanilla planifolia HOM05D006051 ORTHO05D008120 1.8e-11 74.3 110 42.7
Cre07.g339700 Chlamydomonas reinhardtii HOM05D006051 ORTHO05D008120 4.0e-11 73.2 50 68.0
SMO304G0032 Selaginella moellendorffii HOM05D006051 ORTHO05D008120 5.2e-11 72.8 51 64.7
Os03g0332700 Oryza sativa ssp. japonica HOM05D006051 ORTHO05D008120 2.6e-10 70.5 78 50.0
Glyma.08G028100 Glycine max HOM05D006051 ORTHO05D008120 4.4e-10 69.7 51 68.6
Psat7g021440 Pisum sativum HOM05D006051 ORTHO05D008120 4.4e-10 69.7 47 72.3
Glyma.05G221600 Glycine max HOM05D006051 ORTHO05D008120 5.7e-10 69.3 51 66.7
Pp3c17_22300 Physcomitrium patens HOM05D006051 ORTHO05D008120 5.7e-10 69.3 52 59.6
VMungo0251G0556 Vigna mungo HOM05D006051 ORTHO05D008120 5.7e-10 69.3 107 45.8
Potri.010G245000 Populus trichocarpa HOM05D006051 ORTHO05D008120 7.5e-10 68.9 120 42.5
Ca_17412_v3 Cicer arietinum L. HOM05D006051 ORTHO05D008120 9.8e-10 68.6 47 70.2
Phvul.002G303300 Phaseolus vulgaris HOM05D006051 ORTHO05D008120 9.8e-10 68.6 51 66.7
Medtr8g101390 Medicago truncatula HOM05D006051 ORTHO05D008120 1.3e-09 68.2 47 66.0
Zm00001eb015880 Zea mays HOM05D006051 ORTHO05D008120 1.3e-09 68.2 95 43.2
SEGI_02248 Sequoiadendron giganteum HOM05D006051 ORTHO05D008120 1.7e-09 67.8 49 63.3
TPR.G25446 Trifolium pratense HOM05D006051 ORTHO05D008120 1.7e-09 67.8 47 66.0
Lalb_Chr09g0331911 Lupinus albus HOM05D006051 ORTHO05D008120 3.7e-09 66.6 47 68.1
Mapoly0065s0083 Marchantia polymorpha HOM05D006051 ORTHO05D008120 3.7e-09 66.6 68 50.0
Pp3c2_1340 Physcomitrium patens HOM05D006051 ORTHO05D008120 3.7e-09 66.6 48 60.4
Lalb_Chr05g0223721 Lupinus albus HOM05D006051 ORTHO05D008120 4.1e-08 63.2 100 42.0
Atru.chr1.411 Acer truncatum HOM05D006051 ORTHO05D008120 9.1e-08 62.0 38 76.3
MELO3C028543.2 Cucumis melo HOM05D000004 ORTHO05D000002 4.5e-07 59.7 35 77.1
PRCOL_00003471 Prasinoderma coloniale HOM05D006051 ORTHO05D008120 2.9e-06 57.0 46 58.7


User provided reference genes

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