Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039264.1 Olea europaea HOM05D007913 ORTHO05D009599 1.5e-62 242.7 123 100.0
Oeu009783.1 Olea europaea HOM05D007913 ORTHO05D009599 1.5e-33 146.4 119 67.2
Dinv04476 Davidia involucrata HOM05D007913 ORTHO05D009599 7.2e-20 100.9 113 55.8
Oeu027679.1 Olea europaea HOM05D007913 ORTHO05D009599 2.1e-19 99.4 119 52.9
Oeu027681.1 Olea europaea HOM05D007913 ORTHO05D009599 2.1e-19 99.4 119 52.9
Actinidia14885 Actinidia chinensis HOM05D007913 ORTHO05D009599 4.3e-17 91.7 119 51.3
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 4.3e-17 91.7 113 53.1
Migut.E00331 Erythranthe guttata HOM05D007913 ORTHO05D009599 1.7e-16 89.7 115 52.2
Hma1.2p1_0061F.1_g034050 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 1.7e-16 89.7 111 54.1
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 6.3e-16 87.8 116 50.9
MSTRG.13523 Avicennia marina HOM05D007913 ORTHO05D009599 1.4e-15 86.7 112 43.8
Rhsim09G0108600 Rhododendron simsii HOM05D007913 ORTHO05D009599 1.4e-15 86.7 128 46.1
MSTRG.2241 Avicennia marina HOM05D007913 ORTHO05D009599 4.1e-15 85.1 125 44.8
Migut.E00332 Erythranthe guttata HOM05D007913 ORTHO05D009599 2.6e-14 82.4 119 47.9
Nitab4.5_0003330g0030 Nicotiana tabacum HOM05D007913 ORTHO05D009599 2.6e-14 82.4 117 43.6
Rhsim09G0108800 Rhododendron simsii HOM05D007913 ORTHO05D009599 2.6e-14 82.4 122 49.2
Dinv21098 Davidia involucrata HOM05D007913 ORTHO05D009599 3.4e-14 82.0 90 54.4
Cc00_g12370 Coffea canephora HOM05D007913 ORTHO05D009599 4.5e-14 81.6 126 45.2
Nitab4.5_0000874g0150 Nicotiana tabacum HOM05D007913 ORTHO05D009599 1.7e-13 79.7 117 43.6
PGSC0003DMG400014558 Solanum tuberosum HOM05D007913 ORTHO05D009599 1.7e-13 79.7 122 44.3
MSTRG.13522 Avicennia marina HOM05D007913 ORTHO05D009599 2.9e-13 79.0 120 47.5
Sopen05g005290 Solanum pennellii HOM05D007913 ORTHO05D009599 1.1e-12 77.0 129 41.9
TAR374G0796 Trochodendron aralioides HOM05D007913 ORTHO05D009599 1.1e-12 77.0 114 46.5
MSTRG.13526 Avicennia marina HOM05D007913 ORTHO05D009599 1.9e-12 76.3 112 42.9
vmacro23289 Vaccinium macrocarpon HOM05D007913 ORTHO05D009599 2.5e-12 75.9 121 45.5
SalBow8G2445 Salvia bowleyana HOM05D007913 ORTHO05D009599 4.2e-12 75.1 83 51.8
Thecc.02G356200 Theobroma cacao HOM05D007913 ORTHO05D009599 4.2e-12 75.1 112 48.2
MSTRG.2240 Avicennia marina HOM05D007913 ORTHO05D009599 5.5e-12 74.7 123 42.3
Nitab4.5_0000057g0320 Nicotiana tabacum HOM05D007913 ORTHO05D009599 5.5e-12 74.7 123 43.1
QL01p043366 Quercus lobata HOM05D007913 ORTHO05D009599 5.5e-12 74.7 111 47.7
Potri.010G125900 Populus trichocarpa HOM05D007913 ORTHO05D009599 7.2e-12 74.3 109 45.9
Atru.chr11.1276 Acer truncatum HOM05D007913 ORTHO05D009599 9.4e-12 73.9 125 44.0
Ciclev10033073m.g Citrus clementina HOM05D007913 ORTHO05D009599 1.6e-11 73.2 121 40.5
Nitab4.5_0000874g0170 Nicotiana tabacum HOM05D007913 ORTHO05D009599 1.6e-11 73.2 119 41.2
MSTRG.13524 Avicennia marina HOM05D007913 ORTHO05D009599 4.7e-11 71.6 114 43.0
Peaxi162Scf00382g00033 Petunia axillaris HOM05D007913 ORTHO05D009599 6.1e-11 71.2 113 41.6
Nn4g23816 Nelumbo nucifera HOM05D007913 ORTHO05D009599 2.3e-10 69.3 122 42.6
Nitab4.5_0003330g0020 Nicotiana tabacum HOM05D007913 ORTHO05D009599 2.3e-10 69.3 122 39.3
MSTRG.832 Avicennia marina HOM05D007913 ORTHO05D009599 3.0e-10 68.9 117 41.9
Nn3g17821 Nelumbo nucifera HOM05D007913 ORTHO05D009599 3.0e-10 68.9 114 40.4
COL.COLO4_07914 Corchorus olitorius HOM05D007913 ORTHO05D009599 5.1e-10 68.2 112 44.6
Manes.14G101600 Manihot esculenta HOM05D007913 ORTHO05D009599 5.1e-10 68.2 103 44.7
Prupe.1G309800 Prunus persica HOM05D007913 ORTHO05D009599 8.8e-10 67.4 113 43.4
Peaxi162Scf00382g00026 Petunia axillaris HOM05D007913 ORTHO05D009599 2.0e-09 66.2 114 43.0
Duzib268G1152 Durio zibethinus HOM05D013794 ORTHO05D009599 3.3e-09 65.5 113 41.6
Nitab4.5_0006400g0040 Nicotiana tabacum HOM05D007913 ORTHO05D009599 5.7e-09 64.7 93 46.2
Haze_06128 Corylus avellana HOM05D003281 ORTHO05D004128 2.8e-08 62.4 118 44.9
MBI10_g16032_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 4.8e-08 61.6 133 39.8
FAN07G1066 Fragaria x ananassa HOM05D007913 ORTHO05D009599 1.4e-07 60.1 114 41.2
MBI16_g11028_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 1.4e-07 60.1 133 36.8
FvH4_4g27520 Fragaria vesca HOM05D007913 ORTHO05D009599 1.8e-07 59.7 114 41.2
FAN12G2484 Fragaria x ananassa HOM05D007913 ORTHO05D009599 1.8e-07 59.7 114 41.2
FAN12G3451 Fragaria x ananassa HOM05D007913 ORTHO05D009599 1.8e-07 59.7 114 41.2
FAN22G1199 Fragaria x ananassa HOM05D007913 ORTHO05D009599 1.8e-07 59.7 114 41.2
Cfa000683 Carpinus fangiana HOM05D007913 ORTHO05D009599 2.4e-07 59.3 114 43.0
CSS0025071 Camellia sinensis var. sinensis HOM05D007913 ORTHO05D009599 3.1e-07 58.9 82 43.9
MD13G1042800 Malus domestica HOM05D007913 ORTHO05D009599 5.3e-07 58.2 115 41.7
MSTRG.13525 Avicennia marina HOM05D007913 ORTHO05D009599 7.0e-07 57.8 77 45.5
Aqoxy3G00317 Aquilegia oxysepala HOM05D007913 ORTHO05D009599 9.1e-07 57.4 115 40.0
Duzib251G0161 Durio zibethinus HOM05D013794 ORTHO05D009599 9.1e-07 57.4 109 40.4
vmacro23288 Vaccinium macrocarpon HOM05D007913 ORTHO05D009599 3.4e-06 55.5 121 38.0
QL10p025104 Quercus lobata HOM05D013982 ORTHO05D012395 4.5e-06 55.1 106 40.6
vmacro16450 Vaccinium macrocarpon HOM05D010627 ORTHO05D009599 4.5e-06 55.1 115 35.7
Lsat_1_v5_gn_2_113301 Lactuca sativa HOM05D019774 ORTHO05D018531 5.9e-06 54.7 67 46.3
Rhsim12G0143600 Rhododendron simsii HOM05D007913 ORTHO05D009599 5.9e-06 54.7 84 40.5


User provided reference genes

Program Settings