Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039194.1 Olea europaea HOM05D000531 ORTHO05D001630 5.4e-159 564.3 292 100.0
SalBow1G2623 Salvia bowleyana HOM05D001389 ORTHO05D004821 9.3e-26 121.7 316 36.7
Oeu044216.1 Olea europaea HOM05D000531 ORTHO05D001630 1.3e-24 117.9 296 37.8
MSTRG.10758 Avicennia marina HOM05D000531 ORTHO05D001630 5.1e-24 115.9 319 36.7
Dinv37063 Davidia involucrata HOM05D000531 ORTHO05D001630 1.9e-23 114.0 316 38.3
Dinv14548 Davidia involucrata HOM05D000531 ORTHO05D001630 2.5e-23 113.6 314 36.9
MSTRG.6260 Avicennia marina HOM05D000531 ORTHO05D001630 5.6e-23 112.5 315 34.9
Nitab4.5_0000613g0150 Nicotiana tabacum HOM05D000531 ORTHO05D001630 6.2e-22 109.0 329 35.6
Oeu062531.2 Olea europaea HOM05D000531 ORTHO05D001630 6.2e-22 109.0 295 39.7
SalBow6G4932 Salvia bowleyana HOM05D000531 ORTHO05D001630 8.2e-22 108.6 312 36.2
Peaxi162Scf00575g00618 Petunia axillaris HOM05D000531 ORTHO05D001630 1.8e-21 107.5 317 36.9
SalBow6G2215 Salvia bowleyana HOM05D000531 ORTHO05D001630 1.8e-21 107.5 312 36.2
CSS0046145 Camellia sinensis var. sinensis HOM05D000531 ORTHO05D001630 2.0e-20 104.0 282 39.0
MSTRG.26201 Avicennia marina HOM05D000531 ORTHO05D001630 2.6e-20 103.6 298 33.6
CAN.G128.130 Capsicum annuum HOM05D000531 ORTHO05D001630 2.6e-20 103.6 311 36.0
Nitab4.5_0000123g0060 Nicotiana tabacum HOM05D000531 ORTHO05D001630 4.5e-20 102.8 308 34.1
PGSC0003DMG400028121 Solanum tuberosum HOM05D000531 ORTHO05D001630 1.0e-19 101.7 292 37.3
Nitab4.5_0000811g0030 Nicotiana tabacum HOM05D000531 ORTHO05D001630 2.9e-19 100.1 298 35.9
CANSAT21G2102 Cannabis sativa HOM05D000531 ORTHO05D001630 3.8e-19 99.8 294 34.7
QL04p051667 Quercus lobata HOM05D000531 ORTHO05D001630 1.1e-18 98.2 271 36.9
Migut.K00199 Erythranthe guttata HOM05D000531 ORTHO05D001630 4.2e-18 96.3 276 36.2
Nitab4.5_0002131g0060 Nicotiana tabacum HOM05D000531 ORTHO05D001630 4.2e-18 96.3 317 33.8
Cc00_g02380 Coffea canephora HOM05D000531 ORTHO05D001630 7.1e-18 95.5 309 34.6
Sopen10g031850 Solanum pennellii HOM05D000531 ORTHO05D001630 7.1e-18 95.5 299 36.1
CiPaw.14G038300 Carya illinoinensis HOM05D000531 ORTHO05D001630 4.6e-17 92.8 300 33.0
Nn2g14613 Nelumbo nucifera HOM05D000531 ORTHO05D001630 4.6e-17 92.8 285 33.0
Sabra16G0022000 Salix brachista HOM05D000531 ORTHO05D001630 6.0e-17 92.4 241 36.9
Sed0022838 Sechium edule HOM05D000531 ORTHO05D001630 6.0e-17 92.4 300 33.0
Solyc10g081350.2 Solanum lycopersicum HOM05D000531 ORTHO05D001630 6.0e-17 92.4 295 35.9
TAR633G1290 Trochodendron aralioides HOM05D000531 ORTHO05D001630 6.0e-17 92.4 279 35.5
Nn7g37256 Nelumbo nucifera HOM05D000531 ORTHO05D001630 2.3e-16 90.5 311 32.5
Ciclev10001893m.g Citrus clementina HOM05D000531 ORTHO05D001630 3.0e-16 90.1 302 31.8
DCAR_013520 Daucus carota HOM05D000531 ORTHO05D001630 3.0e-16 90.1 323 31.9
PGSC0003DMG400007208 Solanum tuberosum HOM05D000531 ORTHO05D001630 3.0e-16 90.1 304 31.6
CiPaw.13G048600 Carya illinoinensis HOM05D000531 ORTHO05D001630 3.9e-16 89.7 301 31.2
SGA_v2.0_scaffold17G08000 Striga asiatica HOM05D000531 ORTHO05D001630 3.9e-16 89.7 291 35.4
TWI38G1329 Tripterygium wilfordii HOM05D000531 ORTHO05D001630 5.1e-16 89.4 305 32.1
Lalb_Chr01g0007601 Lupinus albus HOM05D000531 ORTHO05D001630 8.7e-16 88.6 303 28.7
COL.COLO4_07159 Corchorus olitorius HOM05D000531 ORTHO05D001630 1.9e-15 87.4 299 32.1
Duzib128G0257 Durio zibethinus HOM05D000531 ORTHO05D001630 2.5e-15 87.0 303 30.7
Eucgr.J00320 Eucalyptus grandis HOM05D000531 ORTHO05D001630 2.5e-15 87.0 259 34.4
Sopen10g028610 Solanum pennellii HOM05D000531 ORTHO05D001630 3.3e-15 86.7 311 30.5
Thecc.10G131000 Theobroma cacao HOM05D000531 ORTHO05D001630 7.4e-15 85.5 300 32.7
Sed0014567 Sechium edule HOM05D000531 ORTHO05D001630 9.7e-15 85.1 297 30.0
MELO3C019925.2 Cucumis melo HOM05D000531 ORTHO05D001630 1.3e-14 84.7 317 31.2
Lsat_1_v5_gn_5_154320 Lactuca sativa HOM05D000531 ORTHO05D001630 2.1e-14 84.0 300 36.0
Peaxi162Scf00003g05367 Petunia axillaris HOM05D000531 ORTHO05D001630 2.1e-14 84.0 302 32.1
RhsimUnG0021700 Rhododendron simsii HOM05D000531 ORTHO05D001630 2.1e-14 84.0 316 33.2
CsaV3_6G004560 Cucumis sativus L. HOM05D000531 ORTHO05D001630 2.8e-14 83.6 311 31.5
CAN.G959.45 Capsicum annuum HOM05D000531 ORTHO05D001630 3.7e-14 83.2 285 31.9
TWI63G0520 Tripterygium wilfordii HOM05D000531 ORTHO05D001630 3.7e-14 83.2 266 35.7
Migut.J01594 Erythranthe guttata HOM05D000531 ORTHO05D001630 6.3e-14 82.4 299 34.1
ClCG08G008570 Citrullus lanatus HOM05D000531 ORTHO05D001630 1.1e-13 81.6 308 30.8
MD02G1266800 Malus domestica HOM05D000531 ORTHO05D001630 1.1e-13 81.6 263 34.6
Potri.008G010800 Populus trichocarpa HOM05D000531 ORTHO05D001630 1.4e-13 81.3 305 31.1
Prupe.2G056800 Prunus persica HOM05D000531 ORTHO05D001630 1.4e-13 81.3 267 35.2
unitig_46.g18482 Utricularia gibba HOM05D000531 ORTHO05D001630 1.4e-13 81.3 314 31.5
EL10Ac3g07386 Beta vulgaris HOM05D000531 ORTHO05D001630 1.8e-13 80.9 314 32.8
Duzib114G0671 Durio zibethinus HOM05D000531 ORTHO05D001630 1.8e-13 80.9 299 31.4
Potri.016G024000 Populus trichocarpa HOM05D000531 ORTHO05D001630 1.8e-13 80.9 244 34.8
RcHm_v2.0_Chr1g0330441 Rosa chinensis HOM05D000531 ORTHO05D001630 3.1e-13 80.1 262 34.7
TWI53G1058 Tripterygium wilfordii HOM05D000531 ORTHO05D001630 3.1e-13 80.1 247 35.2
TWI77G0193 Tripterygium wilfordii HOM05D000531 ORTHO05D001630 4.1e-13 79.7 257 33.1
Manes.18G048100 Manihot esculenta HOM05D000531 ORTHO05D001630 5.3e-13 79.3 300 30.7
Sabra10G0193500 Salix brachista HOM05D000531 ORTHO05D001630 5.3e-13 79.3 303 30.4
FvH4_7g04850 Fragaria vesca HOM05D000531 ORTHO05D001630 9.0e-13 78.6 265 34.0
PGR142G1180 Punica granatum HOM05D000531 ORTHO05D001630 9.0e-13 78.6 322 31.1
DCAR_020616 Daucus carota HOM05D000531 ORTHO05D001630 1.2e-12 78.2 306 33.3
PGR044G2422 Punica granatum HOM05D000531 ORTHO05D001630 1.2e-12 78.2 273 34.8
Hma1.2p1_0776F.1_g216640 Hydrangea macrophylla HOM05D000531 ORTHO05D001630 1.5e-12 77.8 141 44.7
FAN06G4705 Fragaria x ananassa HOM05D000531 ORTHO05D001630 2.0e-12 77.4 269 33.5
MD07G1052500 Malus domestica HOM05D000531 ORTHO05D001630 2.0e-12 77.4 298 31.2
TWI15G1242 Tripterygium wilfordii HOM05D000531 ORTHO05D001630 2.0e-12 77.4 297 29.0
Ca_08335_v3 Cicer arietinum L. HOM05D000531 ORTHO05D001630 2.6e-12 77.0 292 32.2
Potri.010G248100 Populus trichocarpa HOM05D000531 ORTHO05D001630 2.6e-12 77.0 305 30.5
Potri.010G248300 Populus trichocarpa HOM05D000531 ORTHO05D001630 2.6e-12 77.0 305 31.1
AUR62018468 Chenopodium quinoa HOM05D000531 ORTHO05D001630 3.4e-12 76.6 306 30.4
FAN03G3134 Fragaria x ananassa HOM05D000531 ORTHO05D001630 3.4e-12 76.6 266 33.5
Ca_24118_v3 Cicer arietinum L. HOM05D000531 ORTHO05D001630 4.5e-12 76.3 293 31.7
FAN01G2617 Fragaria x ananassa HOM05D000531 ORTHO05D001630 4.5e-12 76.3 269 33.1
AUR62020955 Chenopodium quinoa HOM05D000531 ORTHO05D001630 5.9e-12 75.9 306 30.4
Sabra08G0006500 Salix brachista HOM05D000531 ORTHO05D001630 5.9e-12 75.9 306 30.1
Atru.chr12.1118 Acer truncatum HOM05D000531 ORTHO05D001630 7.6e-12 75.5 295 31.2
Glyma.03G003400 Glycine max HOM05D000531 ORTHO05D001630 7.6e-12 75.5 300 32.0
Sc13g0000680 Simmondsia chinensis HOM05D000531 ORTHO05D001630 1.0e-11 75.1 307 33.6
THA.LOC104821606 Tarenaya hassleriana HOM05D000531 ORTHO05D001630 1.0e-11 75.1 296 32.4
FAN10G3375 Fragaria x ananassa HOM05D000531 ORTHO05D001630 1.3e-11 74.7 266 32.7
Lalb_Chr19g0132611 Lupinus albus HOM05D000531 ORTHO05D001630 1.3e-11 74.7 304 27.6
Gohir.A05G285300 Gossypium hirsutum HOM05D000531 ORTHO05D001630 1.7e-11 74.3 267 32.2
arahy.Tifrunner.gnm1.ann1.D3TLZY Arachis hypogaea HOM05D000531 ORTHO05D001630 2.2e-11 73.9 295 30.2
Lsat_1_v5_gn_9_30361 Lactuca sativa HOM05D000531 ORTHO05D001630 2.2e-11 73.9 294 33.7
PSO384G4223 Papaver somniferum HOM05D000531 ORTHO05D001630 2.9e-11 73.6 313 31.3
Actinidia37870 Actinidia chinensis HOM05D000531 ORTHO05D001630 5.0e-11 72.8 318 33.0
Cfa010429 Carpinus fangiana HOM05D000531 ORTHO05D001630 5.0e-11 72.8 291 28.5
Glyma.04G124200 Glycine max HOM05D000531 ORTHO05D001630 5.0e-11 72.8 266 32.0
PSO339G0899 Papaver somniferum HOM05D000531 ORTHO05D001630 5.0e-11 72.8 315 31.1
vmacro07601 Vaccinium macrocarpon HOM05D000531 ORTHO05D001630 5.0e-11 72.8 352 29.3
Gorai.009G301400 Gossypium raimondii HOM05D000531 ORTHO05D001630 6.5e-11 72.4 300 32.0
Lsat_1_v5_gn_8_85300 Lactuca sativa HOM05D000531 ORTHO05D001630 6.5e-11 72.4 315 33.3
Lalb_Chr03g0032521 Lupinus albus HOM05D000531 ORTHO05D001630 6.5e-11 72.4 266 31.2
Glyma.08G227000 Glycine max HOM05D000531 ORTHO05D001630 1.1e-10 71.6 306 31.4
Glyma.19G067900 Glycine max HOM05D000531 ORTHO05D001630 1.1e-10 71.6 295 29.8
Sabra10G0193700 Salix brachista HOM05D000531 ORTHO05D001630 1.1e-10 71.6 303 29.0
MBI13_g00560_MAGBIO Magnolia biondii HOM05D000531 ORTHO05D001630 1.4e-10 71.2 316 29.1
VMungo1383G2950 Vigna mungo HOM05D000531 ORTHO05D001630 1.4e-10 71.2 301 34.2
arahy.Tifrunner.gnm1.ann1.N4NI2R Arachis hypogaea HOM05D000531 ORTHO05D001630 1.9e-10 70.9 292 29.8
HanXRQChr13g0406441 Helianthus annuus HOM05D000531 ORTHO05D001630 1.9e-10 70.9 247 33.6
Ciclev10012205m.g Citrus clementina HOM05D000531 ORTHO05D001630 2.5e-10 70.5 290 30.3
Lj1g0026220 Lotus japonicus HOM05D000531 ORTHO05D001630 2.5e-10 70.5 300 32.3
Glyma.19G122800 Glycine max HOM05D000531 ORTHO05D001630 3.2e-10 70.1 306 30.4
Lalb_Chr22g0358261 Lupinus albus HOM05D000531 ORTHO05D001630 4.2e-10 69.7 309 32.7
MBI19_g34003_MAGBIO Magnolia biondii HOM05D000531 ORTHO05D001630 5.5e-10 69.3 321 31.5
Solyc10g076920.3 Solanum lycopersicum HOM05D000531 ORTHO05D001630 5.5e-10 69.3 286 28.3
Medtr7g088090 Medicago truncatula HOM05D000531 ORTHO05D001630 7.2e-10 68.9 287 33.1
Eucgr.K01706 Eucalyptus grandis HOM05D000531 ORTHO05D001630 1.6e-09 67.8 275 31.6
Lj3g0019182 Lotus japonicus HOM05D000531 ORTHO05D001630 1.6e-09 67.8 248 31.5
Medtr8g043960 Medicago truncatula HOM05D000531 ORTHO05D001630 1.6e-09 67.8 289 29.4
Phvul.011G186800 Phaseolus vulgaris HOM05D000531 ORTHO05D001630 1.6e-09 67.8 292 29.1
Haze_03382 Corylus avellana HOM05D000531 ORTHO05D001630 2.1e-09 67.4 294 28.2
Lj3g0022692 Lotus japonicus HOM05D000531 ORTHO05D001630 2.1e-09 67.4 297 29.0
Cpa.g.sc33.182 Carica papaya HOM05D000531 ORTHO05D001630 2.7e-09 67.0 267 32.2
ECA236G1381 Erigeron canadensis HOM05D000531 ORTHO05D001630 4.6e-09 66.2 303 32.3
Gohir.D05G286200 Gossypium hirsutum HOM05D000531 ORTHO05D001630 4.6e-09 66.2 303 30.4
Glyma.15G222400 Glycine max HOM05D000531 ORTHO05D001630 6.1e-09 65.9 263 33.1
Gohir.D05G286300 Gossypium hirsutum HOM05D000531 ORTHO05D001630 6.1e-09 65.9 300 31.0
Actinidia17971 Actinidia chinensis HOM05D000531 ORTHO05D009735 7.9e-09 65.5 296 34.5
TPR.G5132 Trifolium pratense HOM05D000531 ORTHO05D001630 7.9e-09 65.5 269 30.5
Ah.13g077520 Amaranthus hybridus HOM05D000531 ORTHO05D001630 1.0e-08 65.1 324 30.6
TPR.G33923 Trifolium pratense HOM05D000531 ORTHO05D001630 1.0e-08 65.1 275 33.5
VMungo1127G0147 Vigna mungo HOM05D000531 ORTHO05D001630 1.3e-08 64.7 317 29.7
Medtr3g010660 Medicago truncatula HOM05D000531 ORTHO05D001630 1.8e-08 64.3 277 29.2
Hund19046 Selenicereus undatus HOM05D000531 ORTHO05D001630 1.8e-08 64.3 131 42.7
TWI74G1234 Tripterygium wilfordii HOM05D000531 ORTHO05D001630 1.8e-08 64.3 261 33.7
Phvul.001G101000 Phaseolus vulgaris HOM05D000531 ORTHO05D001630 2.3e-08 63.9 299 32.1
Medtr6g026800 Medicago truncatula HOM05D000531 ORTHO05D001630 3.9e-08 63.2 273 33.0
Psat4g141680 Pisum sativum HOM05D000531 ORTHO05D001630 3.9e-08 63.2 267 32.6
Aqoxy1G00009 Aquilegia oxysepala HOM05D000531 ORTHO05D001630 6.7e-08 62.4 310 29.0
Ca_14175_v3 Cicer arietinum L. HOM05D000531 ORTHO05D001630 6.7e-08 62.4 277 30.7
Lj2P414T22 Lonicera japonica HOM05D000531 ORTHO05D001630 6.7e-08 62.4 255 31.8
SGA_v2.0_scaffold66G22344 Striga asiatica HOM05D002397 ORTHO05D002667 6.7e-08 62.4 281 32.4
Sc09g0004990 Simmondsia chinensis HOM05D000531 ORTHO05D001630 1.5e-07 61.2 306 28.4
Glyma.05G079800 Glycine max HOM05D000531 ORTHO05D001630 2.5e-07 60.5 300 28.7
Lalb_Chr02g0157611 Lupinus albus HOM05D000531 ORTHO05D001630 2.5e-07 60.5 291 30.6
Phvul.004G053300 Phaseolus vulgaris HOM05D000531 ORTHO05D001630 2.5e-07 60.5 289 28.4
Psat5g225680 Pisum sativum HOM05D000531 ORTHO05D001630 2.5e-07 60.5 304 27.6
arahy.Tifrunner.gnm1.ann1.203Q7N Arachis hypogaea HOM05D000531 ORTHO05D001630 3.3e-07 60.1 305 30.8
arahy.Tifrunner.gnm1.ann1.ZS1FXZ Arachis hypogaea HOM05D000531 ORTHO05D001630 3.3e-07 60.1 306 30.4
HanXRQChr10g0291921 Helianthus annuus HOM05D000531 ORTHO05D001630 3.3e-07 60.1 303 31.0
Glyma.06G314400 Glycine max HOM05D000531 ORTHO05D001630 5.7e-07 59.3 324 27.2
Gohir.A05G285200 Gossypium hirsutum HOM05D000531 ORTHO05D001630 5.7e-07 59.3 134 38.8
Phvul.005G011600 Phaseolus vulgaris HOM05D000531 ORTHO05D001630 5.7e-07 59.3 287 28.6
HanXRQChr04g0125451 Helianthus annuus HOM05D000531 ORTHO05D001630 9.7e-07 58.5 274 31.0
VMungo0464G2106 Vigna mungo HOM05D000531 ORTHO05D001630 1.3e-06 58.2 281 27.8
CDE02G0621 Ceratophyllum demersum HOM05D000531 ORTHO05D001630 1.6e-06 57.8 129 43.4
Oeu039193.1 Olea europaea HOM05D000531 ORTHO05D001630 2.2e-06 57.4 235 28.9
Potri.006G025800 Populus trichocarpa HOM05D000531 ORTHO05D001630 2.2e-06 57.4 241 30.7
THA.LOC104824391 Tarenaya hassleriana HOM05D000531 ORTHO05D001630 2.2e-06 57.4 291 29.9
A09p49670 Brassica napus HOM05D000531 ORTHO05D001630 4.8e-06 56.2 290 29.0
BraA09t40420Z Brassica rapa HOM05D000531 ORTHO05D001630 4.8e-06 56.2 290 29.0
BolC8t50826H Brassica oleracea HOM05D000531 ORTHO05D001630 6.3e-06 55.8 286 29.4
Gorai.009G301200 Gossypium raimondii HOM05D000531 ORTHO05D001630 6.3e-06 55.8 300 28.0
ECA247G2083 Erigeron canadensis HOM05D000531 ORTHO05D001630 8.2e-06 55.5 254 31.9
Eucgr.A02171 Eucalyptus grandis HOM05D000531 ORTHO05D001630 8.2e-06 55.5 304 29.6


User provided reference genes

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