Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu039184.1 Olea europaea HOM05D004297 ORTHO05D005213 5.9e-269 930.2 458 100.0
Oeu036598.1 Olea europaea HOM05D004297 ORTHO05D005213 4.7e-226 787.7 450 83.6
MSTRG.17286 Avicennia marina HOM05D004297 ORTHO05D005213 4.9e-223 777.7 454 83.9
SGA_v2.0_scaffold78G25411 Striga asiatica HOM05D004297 ORTHO05D005213 6.4e-223 777.3 454 83.5
Migut.B01779 Erythranthe guttata HOM05D004297 ORTHO05D005213 1.4e-222 776.2 454 83.3
Cc02_g38370 Coffea canephora HOM05D004297 ORTHO05D005213 4.6e-221 771.2 451 82.5
SalBow3G3037 Salvia bowleyana HOM05D004297 ORTHO05D005213 1.3e-220 769.6 454 81.3
Dinv43843 Davidia involucrata HOM05D004297 ORTHO05D005213 2.1e-218 762.3 451 81.2
Actinidia10047 Actinidia chinensis HOM05D004297 ORTHO05D005213 8.4e-215 750.4 450 80.2
Nitab4.5_0006942g0020 Nicotiana tabacum HOM05D004297 ORTHO05D005213 4.2e-214 748.0 454 80.0
CAN.G78.102 Capsicum annuum HOM05D004297 ORTHO05D005213 7.1e-214 747.3 454 79.7
GSVIVG01026995001 Vitis vinifera HOM05D004297 ORTHO05D005213 2.7e-213 745.3 452 80.3
Solyc01g094880.3 Solanum lycopersicum HOM05D004297 ORTHO05D005213 7.8e-213 743.8 454 78.9
Cpa.g.sc11.37 Carica papaya HOM05D004297 ORTHO05D005213 1.0e-212 743.4 451 78.9
QL04p054287 Quercus lobata HOM05D004297 ORTHO05D005213 1.7e-212 742.7 451 79.2
Nitab4.5_0000583g0330 Nicotiana tabacum HOM05D004297 ORTHO05D005213 2.3e-212 742.3 454 79.5
Sopen01g038660 Solanum pennellii HOM05D004297 ORTHO05D005213 5.1e-212 741.1 454 78.6
Peaxi162Scf00020g01027 Petunia axillaris HOM05D004297 ORTHO05D005213 4.3e-211 738.0 454 78.9
vmacro13256 Vaccinium macrocarpon HOM05D004297 ORTHO05D005213 4.3e-211 738.0 450 79.1
Actinidia20884 Actinidia chinensis HOM05D004297 ORTHO05D005213 5.6e-211 737.6 450 79.1
TAR636G0349 Trochodendron aralioides HOM05D004297 ORTHO05D005213 5.6e-211 737.6 451 78.9
Potri.014G087900 Populus trichocarpa HOM05D004297 ORTHO05D005213 6.2e-210 734.2 451 78.3
FvH4_5g28900 Fragaria vesca HOM05D004297 ORTHO05D005213 8.1e-210 733.8 451 78.3
Gorai.001G159200 Gossypium raimondii HOM05D004297 ORTHO05D005213 4.0e-209 731.5 451 77.6
Medtr7g078170 Medicago truncatula HOM05D004297 ORTHO05D005213 4.0e-209 731.5 451 77.6
Thecc.01G355600 Theobroma cacao HOM05D004297 ORTHO05D005213 6.9e-209 730.7 451 78.7
Gohir.D07G146700 Gossypium hirsutum HOM05D004297 ORTHO05D005213 2.6e-208 728.8 451 77.4
RcHm_v2.0_Chr7g0221211 Rosa chinensis HOM05D004297 ORTHO05D005213 5.8e-208 727.6 451 77.4
Gohir.A07G141200 Gossypium hirsutum HOM05D004297 ORTHO05D005213 1.7e-207 726.1 451 76.9
FAN18G0188 Fragaria x ananassa HOM05D004297 ORTHO05D005213 2.9e-207 725.3 462 76.4
Lj1g0026001 Lotus japonicus HOM05D004297 ORTHO05D005213 8.4e-207 723.8 451 76.9
TPR.G37786 Trifolium pratense HOM05D004297 ORTHO05D005213 8.4e-207 723.8 451 76.9
CiPaw.02G033500 Carya illinoinensis HOM05D004297 ORTHO05D005213 2.4e-206 722.2 451 77.4
Glyma.09G256700 Glycine max HOM05D004297 ORTHO05D005213 2.4e-206 722.2 451 77.4
Prupe.2G174200 Prunus persica HOM05D004297 ORTHO05D005213 3.2e-206 721.8 451 77.2
Sabra14G0063700 Salix brachista HOM05D004297 ORTHO05D005213 3.2e-206 721.8 461 76.1
Atru.chr5.535 Acer truncatum HOM05D004297 ORTHO05D005213 5.4e-206 721.1 451 78.0
Ciclev10018597m.g Citrus clementina HOM05D004297 ORTHO05D005213 7.1e-206 720.7 451 77.4
Lj9C586G6 Lonicera japonica HOM05D004297 ORTHO05D005213 9.3e-206 720.3 451 78.5
Cfa003893 Carpinus fangiana HOM05D004297 ORTHO05D005213 1.2e-205 719.9 451 77.8
Manes.01G254400 Manihot esculenta HOM05D004297 ORTHO05D005213 2.1e-205 719.2 451 76.7
CANSAT56G3337 Cannabis sativa HOM05D004297 ORTHO05D005213 2.7e-205 718.8 451 76.5
VMungo1383G1290 Vigna mungo HOM05D004297 ORTHO05D005213 3.5e-205 718.4 451 76.5
Duzib133G0964 Durio zibethinus HOM05D004297 ORTHO05D005213 7.9e-205 717.2 451 77.2
FAN08G3284 Fragaria x ananassa HOM05D004297 ORTHO05D005213 1.0e-204 716.8 466 74.9
TAR629G2795 Trochodendron aralioides HOM05D004297 ORTHO05D005213 2.3e-204 715.7 451 76.5
FAN13G2415 Fragaria x ananassa HOM05D004297 ORTHO05D005213 3.0e-204 715.3 462 75.8
Phvul.008G060200 Phaseolus vulgaris HOM05D004297 ORTHO05D005213 5.1e-204 714.5 451 76.1
EL10Ac1g00379 Beta vulgaris HOM05D004297 ORTHO05D005213 1.1e-203 713.4 451 75.6
TWI59G0377 Tripterygium wilfordii HOM05D004297 ORTHO05D005213 2.5e-203 712.2 451 77.6
Glyma.18G235800 Glycine max HOM05D004297 ORTHO05D005213 3.3e-203 711.8 451 76.5
Lalb_Chr03g0038271 Lupinus albus HOM05D004297 ORTHO05D005213 5.6e-203 711.1 451 75.4
Potri.002G162000 Populus trichocarpa HOM05D004297 ORTHO05D005213 9.6e-203 710.3 451 76.7
MD11G1239500 Malus domestica HOM05D004297 ORTHO05D005213 1.6e-202 709.5 451 76.5
Eucgr.E00109 Eucalyptus grandis HOM05D004297 ORTHO05D005213 4.8e-202 708.0 452 75.7
AUR62022597 Chenopodium quinoa HOM05D004297 ORTHO05D005213 1.5e-200 703.0 451 74.7
Ca_00827_v3 Cicer arietinum L. HOM05D000005 ORTHO05D005213 2.0e-200 702.6 441 76.6
CSS0008006 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 1.3e-199 699.9 450 76.9
Rhsim07G0012700 Rhododendron simsii HOM05D004297 ORTHO05D005213 2.9e-199 698.7 424 79.5
PSO063G5582 Papaver somniferum HOM05D004297 ORTHO05D005213 3.8e-199 698.4 451 75.2
Hund27256 Selenicereus undatus HOM05D004297 ORTHO05D005213 6.4e-199 697.6 451 73.8
DCAR_006941 Daucus carota HOM05D004297 ORTHO05D005213 8.4e-199 697.2 451 74.1
Nn6g33322 Nelumbo nucifera HOM05D004297 ORTHO05D005213 7.1e-198 694.1 451 74.1
arahy.Tifrunner.gnm1.ann1.0F1BT2 Arachis hypogaea HOM05D004297 ORTHO05D005213 7.9e-197 690.6 451 75.6
arahy.Tifrunner.gnm1.ann1.553FBT Arachis hypogaea HOM05D004297 ORTHO05D005213 7.9e-197 690.6 451 75.6
HanXRQChr04g0121341 Helianthus annuus HOM05D004297 ORTHO05D005213 1.8e-196 689.5 451 73.8
PGR042G3632 Punica granatum HOM05D004297 ORTHO05D005213 6.7e-196 687.6 451 74.3
Aqoxy5G04078 Aquilegia oxysepala HOM05D004297 ORTHO05D005213 1.5e-195 686.4 451 73.2
MELO3C021189.2 Cucumis melo HOM05D004297 ORTHO05D005213 6.9e-193 677.6 451 71.0
THA.LOC104817308 Tarenaya hassleriana HOM05D004297 ORTHO05D005213 1.2e-192 676.8 451 72.7
ECA236G0245 Erigeron canadensis HOM05D004297 ORTHO05D005213 2.0e-192 676.0 451 71.8
Sabra02G0129100 Salix brachista HOM05D004297 ORTHO05D005213 1.0e-191 673.7 482 70.5
unitig_749.g14347 Utricularia gibba HOM05D004297 ORTHO05D005213 2.2e-191 672.5 462 71.0
Lsat_1_v5_gn_7_3220 Lactuca sativa HOM05D004297 ORTHO05D005213 2.9e-191 672.2 451 72.5
CsaV3_6G000810 Cucumis sativus L. HOM05D004297 ORTHO05D005213 1.1e-190 670.2 451 70.5
Hma1.2p1_0071F.1_g037770 Hydrangea macrophylla HOM05D004297 ORTHO05D005213 3.2e-190 668.7 385 82.9
Hma1.2p1_0071F.1_g037780 Hydrangea macrophylla HOM05D004297 ORTHO05D005213 3.2e-190 668.7 385 82.9
Haze_15540 Corylus avellana HOM05D004297 ORTHO05D005213 7.1e-190 667.5 451 73.8
ClCG06G003500 Citrullus lanatus HOM05D004297 ORTHO05D005213 1.3e-188 663.3 475 67.6
Sed0013986 Sechium edule HOM05D004297 ORTHO05D005213 6.7e-188 661.0 451 69.6
AL5G43840 Arabidopsis lyrata HOM05D004297 ORTHO05D005213 2.8e-186 655.6 451 70.5
Thhalv10005756m.g Eutrema salsugineum HOM05D004297 ORTHO05D005213 1.8e-185 652.9 451 70.7
Sed0025112 Sechium edule HOM05D004297 ORTHO05D005213 1.8e-185 652.9 451 69.2
A09p53530 Brassica napus HOM05D004297 ORTHO05D005213 5.3e-185 651.4 451 69.8
BraA09t40777Z Brassica rapa HOM05D004297 ORTHO05D005213 5.3e-185 651.4 451 69.8
C08p36360 Brassica napus HOM05D004297 ORTHO05D005213 4.5e-184 648.3 451 69.6
BolC8t51219H Brassica oleracea HOM05D004297 ORTHO05D005213 5.9e-184 647.9 451 69.6
AT5G28350 Arabidopsis thaliana HOM05D004297 ORTHO05D005213 1.0e-183 647.1 451 69.6
Sp5g01920 Schrenkiella parvula HOM05D004297 ORTHO05D005213 1.3e-183 646.7 451 69.0
AT3G61480 Arabidopsis thaliana HOM05D004297 ORTHO05D005213 3.8e-183 645.2 451 69.4
Duzib138G1153 Durio zibethinus HOM05D004297 ORTHO05D005213 3.6e-181 638.6 451 71.0
ATR0661G292 Amborella trichopoda HOM05D004297 ORTHO05D005213 3.0e-180 635.6 452 67.5
Carub.0005s2817 Capsella rubella HOM05D004297 ORTHO05D005213 1.1e-179 633.6 452 68.6
CDE04G2307 Ceratophyllum demersum HOM05D004297 ORTHO05D005213 3.3e-179 632.1 459 66.9
Aa31LG1G27480 Aethionema arabicum HOM05D004297 ORTHO05D005213 2.3e-172 609.4 424 70.5
Os02g0786000 Oryza sativa ssp. japonica HOM05D004297 ORTHO05D005213 1.5e-171 606.7 455 64.8
Dinv32504 Davidia involucrata HOM05D004297 ORTHO05D005213 9.7e-171 604.0 455 68.8
BcaC07g40648 Brassica carinata HOM05D004297 ORTHO05D005213 1.3e-170 603.6 451 66.1
MD01G1067900 Malus domestica HOM05D004297 ORTHO05D005213 5.0e-167 591.7 450 67.3
Zm00001eb257250 Zea mays HOM05D004297 ORTHO05D005213 1.4e-166 590.1 450 63.3
Zm00001eb192800 Zea mays HOM05D004297 ORTHO05D005213 1.0e-164 583.9 450 62.7
Sc23g0002720 Simmondsia chinensis HOM05D004297 ORTHO05D005213 3.9e-164 582.0 332 81.6
CARHR171820 Cardamine hirsuta HOM05D004297 ORTHO05D005213 1.9e-150 536.6 323 76.8
Psat3g107280 Pisum sativum HOM05D004297 ORTHO05D005213 7.2e-150 534.6 441 63.0
AUR62004390 Chenopodium quinoa HOM05D004297 ORTHO05D005213 2.4e-145 519.6 396 65.7
AL5G43780 Arabidopsis lyrata HOM05D004297 ORTHO05D005213 1.3e-143 513.8 377 68.2
HPP92_012694 Vanilla planifolia HOM05D004297 ORTHO05D005213 8.0e-133 478.0 450 52.4
SEGI_29424 Sequoiadendron giganteum HOM05D004297 ORTHO05D000001 2.6e-131 473.0 284 76.4
Mapoly0027s0035 Marchantia polymorpha HOM05D004297 ORTHO05D005213 8.6e-127 458.0 460 50.2
Psat7g148560 Pisum sativum HOM05D004297 ORTHO05D005213 6.8e-124 448.4 283 78.1
SHI13402 Sapria himalayana HOM05D004297 ORTHO05D005213 7.0e-121 438.3 339 63.7
Pp3c2_4880 Physcomitrium patens HOM05D004297 ORTHO05D005213 2.1e-117 426.8 472 46.8
Pp3c14_21590 Physcomitrium patens HOM05D004297 ORTHO05D005213 1.2e-115 421.0 470 46.0
CBR_g36279 Chara braunii HOM05D004297 ORTHO05D005213 4.6e-112 409.1 495 42.2
SMO367G0176 Selaginella moellendorffii HOM05D004297 ORTHO05D005213 4.6e-112 409.1 448 46.4
COL.COLO4_12743 Corchorus olitorius HOM05D004297 ORTHO05D005213 4.5e-83 312.8 319 53.0
Psat0ss4650g0200 Pisum sativum HOM05D004297 ORTHO05D005213 9.9e-83 311.6 177 84.2
CiPaw.01G064500 Carya illinoinensis HOM05D004297 ORTHO05D005213 3.3e-70 270.0 147 83.7
TAR629G3312 Trochodendron aralioides HOM05D004297 ORTHO05D005213 3.1e-60 236.9 212 59.4
Cc02_g24300 Coffea canephora HOM05D004297 ORTHO05D005213 6.3e-53 212.6 167 63.5
PRCOL_00000293 Prasinoderma coloniale HOM05D004297 ORTHO05D005213 2.9e-42 177.2 323 33.7
Cre12.g506650 Chlamydomonas reinhardtii HOM05D004297 ORTHO05D005213 6.1e-40 169.5 593 25.6
MCO14G315 Micromonas commoda HOM05D004297 ORTHO05D005213 4.0e-39 166.8 549 26.0
SEGI_39496 Sequoiadendron giganteum HOM05D004297 ORTHO05D005213 8.0e-32 142.5 171 45.0
vmacro23481 Vaccinium macrocarpon HOM05D004297 ORTHO05D005213 4.4e-30 136.7 132 55.3
CSS0030491 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 4.8e-29 133.3 130 56.2
AagrBONN_evm.TU.Sc2ySwM_344.3204 Anthoceros agrestis HOM05D004297 ORTHO05D005213 1.4e-28 131.7 178 41.0
CSS0029755 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 5.0e-26 123.2 134 51.5
Cpa.g.sc11.39 Carica papaya HOM05D004297 ORTHO05D005213 1.2e-22 112.1 65 83.1
Rhsim12G0103300 Rhododendron simsii HOM05D004297 ORTHO05D339569 1.2e-22 112.1 161 43.5
RcHm_v2.0_Chr1g0356901 Rosa chinensis HOM05D004297 ORTHO05D005213 1.8e-15 88.2 95 52.6
Cfa026409 Carpinus fangiana HOM05D004297 ORTHO05D005213 8.9e-15 85.9 294 25.5
RcHm_v2.0_Chr1g0356891 Rosa chinensis HOM05D004297 ORTHO05D005213 5.8e-14 83.2 45 82.2
Lsat_1_v5_gn_4_49241 Lactuca sativa HOM05D004297 ORTHO05D005213 1.9e-09 68.2 55 54.5
Sc23g0002730 Simmondsia chinensis HOM05D004297 ORTHO05D005213 4.3e-09 67.0 52 57.7
CSS0014634 Camellia sinensis var. sinensis HOM05D004297 ORTHO05D005213 1.2e-08 65.5 89 46.1
BcaC07g42689 Brassica carinata HOM05D004297 ORTHO05D005213 9.8e-06 55.8 42 59.5


User provided reference genes

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