Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038974.1 Olea europaea HOM05D004499 ORTHO05D004928 2.0e-179 632.5 364 100.0
Oeu059988.1 Olea europaea HOM05D004499 ORTHO05D004928 1.3e-90 337.4 417 58.5
Oeu029418.1 Olea europaea HOM05D004499 ORTHO05D004928 8.5e-53 211.8 364 44.2
MSTRG.19143 Avicennia marina HOM05D004499 ORTHO05D004928 5.5e-52 209.1 362 40.6
Cc06_g03680 Coffea canephora HOM05D004499 ORTHO05D004928 1.0e-42 178.3 396 40.2
CSS0026303 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 5.2e-42 176.0 371 38.8
Dinv37265 Davidia involucrata HOM05D004499 ORTHO05D004928 5.2e-42 176.0 375 40.5
CSS0037383 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 6.8e-42 175.6 371 38.5
Gohir.A04G075800 Gossypium hirsutum HOM05D004499 ORTHO05D004928 2.8e-40 170.2 374 41.4
Haze_20629 Corylus avellana HOM05D004499 ORTHO05D004928 1.4e-39 167.9 387 37.5
CSS0015121 Camellia sinensis var. sinensis HOM05D004499 ORTHO05D004928 1.8e-39 167.5 381 36.2
Hma1.2p1_0350F.1_g132810 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 5.4e-39 166.0 352 39.5
Hma1.2p1_0111F.1_g054000 Hydrangea macrophylla HOM05D004499 ORTHO05D004928 2.7e-38 163.7 375 38.1
MD04G1102600 Malus domestica HOM05D004499 ORTHO05D004928 7.7e-38 162.2 390 36.2
Gorai.009G419500 Gossypium raimondii HOM05D004499 ORTHO05D004928 1.0e-37 161.8 374 40.4
TAR623G0879 Trochodendron aralioides HOM05D004499 ORTHO05D004928 2.3e-37 160.6 381 37.0
Prupe.6G240400 Prunus persica HOM05D004499 ORTHO05D004928 2.9e-37 160.2 384 39.1
CiPaw.09G179000 Carya illinoinensis HOM05D004499 ORTHO05D004928 1.9e-36 157.5 380 36.3
ClCG10G020450 Citrullus lanatus HOM05D004499 ORTHO05D004928 2.5e-36 157.1 399 34.3
MSTRG.10304 Avicennia marina HOM05D004499 ORTHO05D004928 4.2e-36 156.4 364 37.4
DCAR_014968 Daucus carota HOM05D004499 ORTHO05D004928 5.5e-36 156.0 346 38.2
Duzib093G0117 Durio zibethinus HOM05D004499 ORTHO05D004928 2.1e-35 154.1 380 37.4
SalBow3G3210 Salvia bowleyana HOM05D004499 ORTHO05D004928 3.6e-35 153.3 358 38.0
CANSAT80G2505 Cannabis sativa HOM05D004499 ORTHO05D004928 8.0e-35 152.1 413 34.9
Atru.chr8.1895 Acer truncatum HOM05D004499 ORTHO05D004928 1.4e-34 151.4 366 39.9
Thecc.05G055800 Theobroma cacao HOM05D004499 ORTHO05D004928 2.3e-34 150.6 381 39.1
MSTRG.26719 Avicennia marina HOM05D004499 ORTHO05D004928 3.0e-34 150.2 366 38.8
Cfa017521 Carpinus fangiana HOM05D004499 ORTHO05D004928 3.0e-34 150.2 389 34.4
QL07p045089 Quercus lobata HOM05D004499 ORTHO05D004928 5.2e-34 149.4 378 38.6
MELO3C009326.2 Cucumis melo HOM05D004499 ORTHO05D004928 1.5e-33 147.9 399 38.1
Gohir.A09G151400 Gossypium hirsutum HOM05D004499 ORTHO05D004928 2.6e-33 147.1 362 35.4
Gorai.006G168200 Gossypium raimondii HOM05D004499 ORTHO05D004928 2.6e-33 147.1 362 35.4
Oeu060092.2 Olea europaea HOM05D000784 ORTHO05D004928 2.6e-33 147.1 360 37.2
Gohir.D09G147000 Gossypium hirsutum HOM05D004499 ORTHO05D004928 7.5e-33 145.6 362 35.4
Nn2g10698 Nelumbo nucifera HOM05D004499 ORTHO05D004928 2.9e-32 143.7 380 36.8
Sed0006356 Sechium edule HOM05D004499 ORTHO05D004928 3.7e-32 143.3 374 35.6
CsaV3_3G035670 Cucumis sativus L. HOM05D004499 ORTHO05D004928 4.9e-32 142.9 404 37.9
Sabra06G0102500 Salix brachista HOM05D004499 ORTHO05D004928 4.9e-32 142.9 381 35.7
Migut.J00423 Erythranthe guttata HOM05D004499 ORTHO05D004928 8.3e-32 142.1 366 38.3
Manes.09G078863 Manihot esculenta HOM05D004499 ORTHO05D004928 9.2e-31 138.7 374 35.8
CiPaw.10G136800 Carya illinoinensis HOM05D004499 ORTHO05D004928 1.2e-30 138.3 380 34.2
Cpa.g.sc174.12 Carica papaya HOM05D004499 ORTHO05D004928 2.0e-30 137.5 355 34.1
Lj1g0000961 Lotus japonicus HOM05D004499 ORTHO05D004928 4.6e-30 136.3 375 34.1
Medtr7g100830 Medicago truncatula HOM05D004499 ORTHO05D004928 4.6e-30 136.3 363 33.6
Sed0022446 Sechium edule HOM05D004499 ORTHO05D004928 4.6e-30 136.3 391 32.2
FAN02G0924 Fragaria x ananassa HOM05D004499 ORTHO05D004928 1.7e-29 134.4 379 36.4
Potri.006G130500 Populus trichocarpa HOM05D004499 ORTHO05D004928 2.9e-29 133.7 380 32.6
RcHm_v2.0_Chr3g0469011 Rosa chinensis HOM05D004499 ORTHO05D004928 3.9e-29 133.3 390 33.8
FAN05G3415 Fragaria x ananassa HOM05D004499 ORTHO05D004928 8.6e-29 132.1 381 32.3
Lalb_Chr25g0289231 Lupinus albus HOM05D004499 ORTHO05D004928 1.1e-28 131.7 384 36.2
PGSC0003DMG400001742 Solanum tuberosum HOM05D004499 ORTHO05D004928 1.1e-28 131.7 344 34.6
THA.LOC104806496 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 1.9e-28 131.0 371 33.4
Ca_08832_v3 Cicer arietinum L. HOM05D004499 ORTHO05D004928 9.5e-28 128.6 349 38.1
FvH4_6g15510 Fragaria vesca HOM05D004499 ORTHO05D004928 9.5e-28 128.6 381 35.2
FAN14G2800 Fragaria x ananassa HOM05D004499 ORTHO05D004928 9.5e-28 128.6 381 35.2
Solyc09g007470.2 Solanum lycopersicum HOM05D004499 ORTHO05D004928 9.5e-28 128.6 344 35.5
TWI53G1356 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 1.2e-27 128.3 392 32.1
FAN09G3365 Fragaria x ananassa HOM05D004499 ORTHO05D004928 2.8e-27 127.1 381 34.9
Nn2g13028 Nelumbo nucifera HOM05D004499 ORTHO05D004928 2.8e-27 127.1 392 32.1
Gohir.D04G114901 Gossypium hirsutum HOM05D004499 ORTHO05D004928 6.1e-27 125.9 152 53.3
Sopen00g013370 Solanum pennellii HOM05D004499 ORTHO05D004928 6.1e-27 125.9 342 35.7
Phvul.001G175400 Phaseolus vulgaris HOM05D004499 ORTHO05D004928 8.0e-27 125.6 359 34.0
Manes.08G004114 Manihot esculenta HOM05D004499 ORTHO05D004928 2.3e-26 124.0 272 37.1
Manes.08G004120 Manihot esculenta HOM05D004499 ORTHO05D004928 2.3e-26 124.0 272 37.1
Dinv35728 Davidia involucrata HOM05D004499 ORTHO05D004928 5.2e-26 122.9 141 54.6
Manes.08G004109 Manihot esculenta HOM05D004499 ORTHO05D004928 5.2e-26 122.9 272 36.8
Manes.08G004117 Manihot esculenta HOM05D004499 ORTHO05D004928 5.2e-26 122.9 272 36.8
Manes.08G004126 Manihot esculenta HOM05D004499 ORTHO05D004928 6.8e-26 122.5 272 37.1
Psat3g044200 Pisum sativum HOM05D004499 ORTHO05D004928 6.8e-26 122.5 370 31.9
PGR004G1454 Punica granatum HOM05D004499 ORTHO05D004928 6.8e-26 122.5 286 33.9
Rhsim04G0149000 Rhododendron simsii HOM05D004499 ORTHO05D004928 1.2e-25 121.7 384 31.5
Manes.08G004127 Manihot esculenta HOM05D004499 ORTHO05D004928 1.5e-25 121.3 272 36.8
Manes.08G004131 Manihot esculenta HOM05D004499 ORTHO05D004928 1.5e-25 121.3 272 36.8
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 2.0e-25 120.9 372 32.5
VMungo1383G2757 Vigna mungo HOM05D004499 ORTHO05D004928 4.4e-25 119.8 360 33.6
Lj5g0026303 Lotus japonicus HOM05D004499 ORTHO05D004928 5.8e-25 119.4 393 32.1
unitig_26.g9218 Utricularia gibba HOM05D004499 ORTHO05D004928 7.5e-25 119.0 351 35.0
Potri.016G086900 Populus trichocarpa HOM05D004499 ORTHO05D004928 1.3e-24 118.2 384 33.3
TWI77G0862 Tripterygium wilfordii HOM05D004499 ORTHO05D004928 1.3e-24 118.2 380 32.6
Glyma.03G178700 Glycine max HOM05D004499 ORTHO05D004928 1.7e-24 117.9 386 33.2
Glyma.13G138000 Glycine max HOM05D004499 ORTHO05D004928 3.7e-24 116.7 362 30.7
Phvul.007G164800 Phaseolus vulgaris HOM05D004499 ORTHO05D004928 6.4e-24 115.9 353 31.4
Medtr1g066750 Medicago truncatula HOM05D004499 ORTHO05D004928 1.4e-23 114.8 347 36.0
Glyma.19G179400 Glycine max HOM05D004499 ORTHO05D004928 1.9e-23 114.4 357 34.5
Lalb_Chr01g0018981 Lupinus albus HOM05D004499 ORTHO05D004928 1.9e-23 114.4 383 32.1
Glyma.10G050500 Glycine max HOM05D004499 ORTHO05D004928 3.2e-23 113.6 354 30.8
Sabra16G0093100 Salix brachista HOM05D004499 ORTHO05D004928 5.4e-23 112.8 394 33.0
Sc20g0005110 Simmondsia chinensis HOM05D004499 ORTHO05D004928 5.4e-23 112.8 375 32.8
MD12G1122400 Malus domestica HOM05D004499 ORTHO05D004928 9.2e-23 112.1 370 29.7
Lsat_1_v5_gn_6_30120 Lactuca sativa HOM05D004499 ORTHO05D004928 3.5e-22 110.2 364 32.7
SGA_v2.0_scaffold126G33909 Striga asiatica HOM05D004499 ORTHO05D004928 7.8e-22 109.0 344 33.1
Thhalv10014228m.g Eutrema salsugineum HOM05D004499 ORTHO05D004928 1.5e-20 104.8 361 32.4
CARHR131610 Cardamine hirsuta HOM05D004499 ORTHO05D004928 1.9e-20 104.4 362 31.8
Psat6g070200 Pisum sativum HOM05D004499 ORTHO05D004928 1.9e-20 104.4 343 31.5
Manes.08G004906 Manihot esculenta HOM05D004499 ORTHO05D004928 5.6e-20 102.8 183 41.5
Manes.12G048251 Manihot esculenta HOM05D004499 ORTHO05D004928 1.2e-19 101.7 183 41.5
Sp4g19420 Schrenkiella parvula HOM05D004499 ORTHO05D004928 1.6e-19 101.3 354 34.7
ClCG04G008860 Citrullus lanatus HOM05D004499 ORTHO05D004928 2.1e-19 100.9 356 30.3
AT5G03110 Arabidopsis thaliana HOM05D004499 ORTHO05D004928 2.8e-19 100.5 356 32.9
BcaC03g13031 Brassica carinata HOM05D004499 ORTHO05D004928 2.8e-19 100.5 350 33.7
DCAR_009280 Daucus carota HOM05D004499 ORTHO05D004928 3.6e-19 100.1 350 31.1
Duzib106G0876 Durio zibethinus HOM05D004499 ORTHO05D004928 3.6e-19 100.1 108 54.6
COL.COLO4_27061 Corchorus olitorius HOM05D004499 ORTHO05D004928 4.7e-19 99.8 89 61.8
C02p00790 Brassica napus HOM05D004499 ORTHO05D004928 1.1e-18 98.6 350 33.4
BolC2t06077H Brassica oleracea HOM05D004499 ORTHO05D004928 1.1e-18 98.6 350 33.4
THA.LOC104826978 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 1.8e-18 97.8 365 30.7
AL6G12390 Arabidopsis lyrata HOM05D004499 ORTHO05D004928 2.3e-18 97.4 354 31.1
TPR.G36959 Trifolium pratense HOM05D004499 ORTHO05D004928 2.3e-18 97.4 92 58.7
Aqoxy4G03228 Aquilegia oxysepala HOM05D004499 ORTHO05D004928 1.2e-17 95.1 386 27.7
MELO3C014257.2 Cucumis melo HOM05D004499 ORTHO05D004928 1.2e-17 95.1 354 28.8
BcaB05g21851 Brassica carinata HOM05D004499 ORTHO05D004928 2.0e-17 94.4 354 33.9
Carub.0006s0191 Capsella rubella HOM05D004499 ORTHO05D004928 2.0e-17 94.4 347 31.4
CARHR210240 Cardamine hirsuta HOM05D004499 ORTHO05D004928 2.0e-17 94.4 360 31.9
Manes.05G197300 Manihot esculenta HOM05D004499 ORTHO05D004928 2.0e-17 94.4 183 40.4
Manes.05G197001 Manihot esculenta HOM05D004499 ORTHO05D004928 2.6e-17 94.0 183 39.9
Sp6g39600 Schrenkiella parvula HOM05D004499 ORTHO05D004928 9.8e-17 92.0 358 31.8
Lalb_Chr20g0112851 Lupinus albus HOM05D004499 ORTHO05D004928 1.7e-16 91.3 291 31.6
CsaV3_6G039360 Cucumis sativus L. HOM05D004499 ORTHO05D004928 4.9e-16 89.7 348 28.7
Thhalv10016942m.g Eutrema salsugineum HOM05D004499 ORTHO05D004928 4.9e-16 89.7 375 30.1
Lsat_1_v5_gn_1_54160 Lactuca sativa HOM05D004499 ORTHO05D004928 6.4e-16 89.4 341 30.8
Ah.15g092180 Amaranthus hybridus HOM05D004499 ORTHO05D004928 5.4e-15 86.3 104 50.0
AUR62042302 Chenopodium quinoa HOM05D004499 ORTHO05D004928 5.4e-15 86.3 78 61.5
BolC4t22678H Brassica oleracea HOM05D004499 ORTHO05D004928 7.1e-15 85.9 357 29.1
BcaC02g11837 Brassica carinata HOM05D004499 ORTHO05D004928 9.2e-15 85.5 357 29.1
C04p10830 Brassica napus HOM05D004499 ORTHO05D004928 9.2e-15 85.5 357 29.1
AL4G33450 Arabidopsis lyrata HOM05D004499 ORTHO05D004928 1.2e-14 85.1 358 29.3
HanXRQChr02g0051991 Helianthus annuus HOM05D004499 ORTHO05D004928 1.2e-14 85.1 83 60.2
BcaB02g09303 Brassica carinata HOM05D004499 ORTHO05D004928 3.5e-14 83.6 362 31.8
ECA233G0353 Erigeron canadensis HOM05D004499 ORTHO05D004928 3.5e-14 83.6 330 31.5
Peaxi162Scf00005g04016 Petunia axillaris HOM05D004499 ORTHO05D004928 6.0e-14 82.8 75 60.0
SHI12538 Sapria himalayana HOM05D004499 ORTHO05D004928 7.8e-14 82.4 380 28.9
BraA02t04744Z Brassica rapa HOM05D004499 ORTHO05D004928 1.3e-13 81.6 352 29.8
BraA05t19842Z Brassica rapa HOM05D004499 ORTHO05D004928 3.0e-13 80.5 362 30.1
A05p08740 Brassica napus HOM05D004499 ORTHO05D004928 6.6e-13 79.3 362 30.1
THA.LOC104816329 Tarenaya hassleriana HOM05D004499 ORTHO05D004928 2.5e-12 77.4 369 27.6
Sed0011318 Sechium edule HOM05D004499 ORTHO05D004928 4.3e-12 76.6 104 47.1
Sc02g0001920 Simmondsia chinensis HOM05D004499 ORTHO05D004928 7.3e-12 75.9 318 27.7
SGA_v2.0_scaffold94G28675 Striga asiatica HOM05D004499 ORTHO05D004928 7.3e-12 75.9 337 28.5
AT2G37100 Arabidopsis thaliana HOM05D004499 ORTHO05D004928 9.5e-12 75.5 361 29.4
Actinidia40043 Actinidia chinensis HOM05D004499 ORTHO05D004928 1.6e-11 74.7 126 44.4
PSO339G1230 Papaver somniferum HOM05D004499 ORTHO05D004928 1.8e-10 71.2 369 26.8
Aa31LG5G22320 Aethionema arabicum HOM05D004499 ORTHO05D004928 1.5e-09 68.2 360 28.3
PSO063G6372 Papaver somniferum HOM05D004499 ORTHO05D004928 2.0e-09 67.8 360 27.2
PSO384G2831 Papaver somniferum HOM05D004499 ORTHO05D004928 3.4e-09 67.0 360 26.7
Carub.0004s1899 Capsella rubella HOM05D004499 ORTHO05D004928 4.4e-09 66.6 350 27.7
MBI07_g32544_MAGBIO Magnolia biondii HOM05D004118 ORTHO05D004686 7.6e-09 65.9 98 48.0
TAR627G0391 Trochodendron aralioides HOM05D004118 ORTHO05D004686 7.6e-09 65.9 87 51.7
Nn1g04275 Nelumbo nucifera HOM05D004118 ORTHO05D004686 2.9e-08 63.9 80 53.8
Thecc.07G100000 Theobroma cacao HOM05D004118 ORTHO05D004686 4.9e-08 63.2 119 40.3
Gorai.002G066200 Gossypium raimondii HOM05D004118 ORTHO05D004686 8.4e-08 62.4 115 42.6
Duzib213G0890 Durio zibethinus HOM05D004118 ORTHO05D004686 1.4e-07 61.6 116 43.1
CSS0030924 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 1.9e-07 61.2 86 45.3
Cpa.g.sc80.12 Carica papaya HOM05D004118 ORTHO05D004686 1.9e-07 61.2 111 43.2
HPP92_001043 Vanilla planifolia HOM05D004499 ORTHO05D004928 2.4e-07 60.8 113 40.7
CSS0010936 Camellia sinensis var. sinensis HOM05D004118 ORTHO05D004686 3.2e-07 60.5 94 45.7
Aqoxy1G02262 Aquilegia oxysepala HOM05D004118 ORTHO05D004686 5.4e-07 59.7 85 49.4
Cfa020624 Carpinus fangiana HOM05D004118 ORTHO05D004686 5.4e-07 59.7 96 45.8
Haze_09381 Corylus avellana HOM05D004118 ORTHO05D004686 5.4e-07 59.7 96 45.8
Lj3g0023579 Lotus japonicus HOM05D004118 ORTHO05D004686 5.4e-07 59.7 99 42.4
Medtr2g078530 Medicago truncatula HOM05D004118 ORTHO05D004686 5.4e-07 59.7 98 45.9
Duzib170G0047 Durio zibethinus HOM05D004118 ORTHO05D004686 7.1e-07 59.3 119 41.2
Eucgr.F01179 Eucalyptus grandis HOM05D004118 ORTHO05D004686 9.2e-07 58.9 355 28.5
PGR083G2344 Punica granatum HOM05D004118 ORTHO05D004686 9.2e-07 58.9 341 28.2
Manes.03G104700 Manihot esculenta HOM05D004118 ORTHO05D004686 1.2e-06 58.5 86 47.7
PSO339G0805 Papaver somniferum HOM05D004499 ORTHO05D004928 1.2e-06 58.5 377 32.1
QL08p023555 Quercus lobata HOM05D004118 ORTHO05D004686 1.2e-06 58.5 98 44.9
Sed0017211 Sechium edule HOM05D004118 ORTHO05D004686 1.2e-06 58.5 84 47.6
Psat5g241400 Pisum sativum HOM05D004118 ORTHO05D004686 1.6e-06 58.2 95 46.3
TPR.G17554 Trifolium pratense HOM05D004118 ORTHO05D004686 1.6e-06 58.2 95 46.3
Lalb_Chr20g0109451 Lupinus albus HOM05D004118 ORTHO05D004686 2.1e-06 57.8 324 32.7
Manes.15G090200 Manihot esculenta HOM05D004118 ORTHO05D004686 2.1e-06 57.8 86 47.7
Glyma.13G273000 Glycine max HOM05D004118 ORTHO05D004686 2.7e-06 57.4 101 43.6
Lsat_1_v5_gn_7_103661 Lactuca sativa HOM05D004118 ORTHO05D004686 2.7e-06 57.4 89 50.6
Phvul.005G069300 Phaseolus vulgaris HOM05D004118 ORTHO05D004686 2.7e-06 57.4 99 43.4
VMungo1080G0043 Vigna mungo HOM05D004118 ORTHO05D004686 2.7e-06 57.4 99 43.4
Gorai.013G171900 Gossypium raimondii HOM05D004118 ORTHO05D004686 3.5e-06 57.0 116 38.8
Lalb_Chr25g0286181 Lupinus albus HOM05D004118 ORTHO05D004686 3.5e-06 57.0 96 44.8
Gohir.A13G147400 Gossypium hirsutum HOM05D004118 ORTHO05D004686 4.6e-06 56.6 116 38.8
Gohir.D13G152264 Gossypium hirsutum HOM05D004118 ORTHO05D004686 4.6e-06 56.6 116 38.8
Lj8C153G19 Lonicera japonica HOM05D004118 ORTHO05D004686 6.0e-06 56.2 85 45.9
Lalb_Chr01g0006651 Lupinus albus HOM05D004118 ORTHO05D004686 6.0e-06 56.2 97 39.2
Sabra11G0090500 Salix brachista HOM05D004118 ORTHO05D004686 6.0e-06 56.2 86 46.5
Sabra11G0091500 Salix brachista HOM05D004118 ORTHO05D004686 6.0e-06 56.2 86 46.5


User provided reference genes

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