Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038787.1 Olea europaea HOM05D004236 ORTHO05D004903 1.0e-57 226.5 111 100.0
Oeu047429.3 Olea europaea HOM05D004236 ORTHO05D004903 5.2e-46 187.6 111 85.6
Peaxi162Scf00803g00219 Petunia axillaris HOM05D004236 ORTHO05D004903 1.2e-42 176.4 111 76.6
Hma1.2p1_0500F.1_g166960 Hydrangea macrophylla HOM05D004236 ORTHO05D004903 7.8e-42 173.7 111 74.8
Migut.H00256 Erythranthe guttata HOM05D004236 ORTHO05D004903 1.0e-41 173.3 111 77.5
CSS0010670 Camellia sinensis var. sinensis HOM05D004236 ORTHO05D004903 1.7e-41 172.6 112 75.0
CSS0025273 Camellia sinensis var. sinensis HOM05D004236 ORTHO05D004903 1.7e-41 172.6 112 75.0
PGSC0003DMG400030596 Solanum tuberosum HOM05D004236 ORTHO05D004903 3.0e-41 171.8 111 73.9
Ah.16g101430 Amaranthus hybridus HOM05D004236 ORTHO05D004903 3.9e-41 171.4 113 73.5
Medtr7g082910 Medicago truncatula HOM05D004236 ORTHO05D004903 3.9e-41 171.4 112 75.9
Cc07_g08360 Coffea canephora HOM05D004236 ORTHO05D004903 5.1e-41 171.0 112 75.9
Duzib133G1178 Durio zibethinus HOM05D004236 ORTHO05D004903 6.6e-41 170.6 112 75.0
Nitab4.5_0005700g0030 Nicotiana tabacum HOM05D004236 ORTHO05D004903 8.7e-41 170.2 112 75.0
TPR.G28393 Trifolium pratense HOM05D004236 ORTHO05D004903 8.7e-41 170.2 112 75.0
vmacro05491 Vaccinium macrocarpon HOM05D004236 ORTHO05D004903 8.7e-41 170.2 112 75.0
GSVIVG01030921001 Vitis vinifera HOM05D004236 ORTHO05D004903 8.7e-41 170.2 112 73.2
CiPaw.04G044800 Carya illinoinensis HOM05D004236 ORTHO05D004903 1.1e-40 169.9 112 75.0
Solyc02g091190.4 Solanum lycopersicum HOM05D004236 ORTHO05D004903 1.1e-40 169.9 111 74.8
Sopen02g035820 Solanum pennellii HOM05D004236 ORTHO05D004903 1.1e-40 169.9 111 74.8
Duzib138G1869 Durio zibethinus HOM05D004236 ORTHO05D004903 1.5e-40 169.5 112 75.0
Thecc.04G125200 Theobroma cacao HOM05D004236 ORTHO05D004903 1.5e-40 169.5 112 75.0
SalBow3G2011 Salvia bowleyana HOM05D004236 ORTHO05D004903 2.5e-40 168.7 111 77.5
SalBow3G4331 Salvia bowleyana HOM05D004236 ORTHO05D004903 2.5e-40 168.7 111 77.5
CAN.G625.68 Capsicum annuum HOM05D004236 ORTHO05D004903 3.3e-40 168.3 112 73.2
Ca_08100_v3 Cicer arietinum L. HOM05D004236 ORTHO05D004903 3.3e-40 168.3 111 77.5
Glyma.02G090500 Glycine max HOM05D004236 ORTHO05D004903 3.3e-40 168.3 112 75.9
Peaxi162Scf00104g01815 Petunia axillaris HOM05D004236 ORTHO05D004903 3.3e-40 168.3 112 71.4
VMungo1383G0222 Vigna mungo HOM05D004236 ORTHO05D004903 4.3e-40 167.9 112 75.0
Gohir.D11G173300 Gossypium hirsutum HOM05D004236 ORTHO05D004903 5.6e-40 167.5 112 74.1
Psat3g096800 Pisum sativum HOM05D004236 ORTHO05D004903 5.6e-40 167.5 112 75.0
Rhsim08G0084400 Rhododendron simsii HOM05D004236 ORTHO05D004903 7.3e-40 167.2 112 74.1
PGSC0003DMG400016698 Solanum tuberosum HOM05D004236 ORTHO05D004903 9.6e-40 166.8 111 72.1
CANSAT80G2204 Cannabis sativa HOM05D004236 ORTHO05D004903 1.3e-39 166.4 113 73.5
CSS0029696 Camellia sinensis var. sinensis HOM05D004236 ORTHO05D004903 1.6e-39 166.0 113 74.3
CiPaw.03G066200 Carya illinoinensis HOM05D004236 ORTHO05D004903 1.6e-39 166.0 112 73.2
Dinv23330 Davidia involucrata HOM05D004236 ORTHO05D004903 1.6e-39 166.0 105 76.2
Gohir.A11G167000 Gossypium hirsutum HOM05D004236 ORTHO05D004903 1.6e-39 166.0 112 73.2
Gorai.007G185600 Gossypium raimondii HOM05D004236 ORTHO05D004903 1.6e-39 166.0 112 73.2
Cpa.g.sc116.5 Carica papaya HOM05D004236 ORTHO05D004903 2.1e-39 165.6 111 73.0
AUR62023213 Chenopodium quinoa HOM05D004236 ORTHO05D004903 2.1e-39 165.6 111 73.0
AUR62023259 Chenopodium quinoa HOM05D004236 ORTHO05D004903 2.1e-39 165.6 111 73.0
PGR042G2451 Punica granatum HOM05D004236 ORTHO05D004903 2.1e-39 165.6 112 74.1
Aqoxy3G00154 Aquilegia oxysepala HOM05D004236 ORTHO05D004903 3.6e-39 164.9 112 71.4
COL.COLO4_27143 Corchorus olitorius HOM05D004236 ORTHO05D004903 3.6e-39 164.9 112 74.1
Rhsim10G0077900 Rhododendron simsii HOM05D004236 ORTHO05D004903 3.6e-39 164.9 112 74.1
Phvul.008G009300 Phaseolus vulgaris HOM05D004236 ORTHO05D004903 4.8e-39 164.5 112 73.2
DCAR_010720 Daucus carota HOM05D004236 ORTHO05D004903 6.2e-39 164.1 112 72.3
Potri.015G062400 Populus trichocarpa HOM05D004236 ORTHO05D004903 6.2e-39 164.1 112 74.1
arahy.Tifrunner.gnm1.ann1.UY7CFX Arachis hypogaea HOM05D004236 ORTHO05D004903 8.1e-39 163.7 112 74.1
ClCG05G010730 Citrullus lanatus HOM05D004236 ORTHO05D004903 8.1e-39 163.7 114 72.8
Lj4A180T59 Lonicera japonica HOM05D004236 ORTHO05D004903 8.1e-39 163.7 111 73.0
Glyma.18G292800 Glycine max HOM05D004236 ORTHO05D004903 1.4e-38 162.9 111 71.2
Lalb_Chr04g0257721 Lupinus albus HOM05D004236 ORTHO05D004903 1.4e-38 162.9 112 74.1
CAN.G11.35 Capsicum annuum HOM05D004236 ORTHO05D004903 1.8e-38 162.5 111 72.1
arahy.Tifrunner.gnm1.ann1.LVD2NH Arachis hypogaea HOM05D004236 ORTHO05D004903 2.4e-38 162.2 112 73.2
DCAR_021451 Daucus carota HOM05D004236 ORTHO05D004903 4.0e-38 161.4 113 73.5
Eucgr.J01534 Eucalyptus grandis HOM05D004236 ORTHO05D004903 4.0e-38 161.4 111 71.2
EL10Ac2g04514 Beta vulgaris HOM05D004236 ORTHO05D004903 5.3e-38 161.0 115 70.4
Nn4g24056 Nelumbo nucifera HOM05D004236 ORTHO05D004903 5.3e-38 161.0 113 71.7
Manes.01G114300 Manihot esculenta HOM05D004236 ORTHO05D004903 9.0e-38 160.2 111 69.4
Sed0018742 Sechium edule HOM05D004236 ORTHO05D004903 1.5e-37 159.5 111 71.2
Gohir.A07G075300 Gossypium hirsutum HOM05D004236 ORTHO05D004903 2.0e-37 159.1 113 69.0
Lalb_Chr17g0336021 Lupinus albus HOM05D004236 ORTHO05D004903 2.0e-37 159.1 107 71.0
MD09G1258900 Malus domestica HOM05D004236 ORTHO05D004903 2.0e-37 159.1 111 71.2
TWI53G1957 Tripterygium wilfordii HOM05D004236 ORTHO05D004903 3.4e-37 158.3 112 70.5
Ciclev10012115m.g Citrus clementina HOM05D004236 ORTHO05D004903 4.5e-37 157.9 111 71.2
Sabra15G0087400 Salix brachista HOM05D004236 ORTHO05D004903 4.5e-37 157.9 113 70.8
SGA_v2.0_scaffold202G41491 Striga asiatica HOM05D004236 ORTHO05D004903 4.5e-37 157.9 110 72.7
unitig_899.g14517 Utricularia gibba HOM05D004236 ORTHO05D004903 4.5e-37 157.9 111 71.2
CsaV3_3G017790 Cucumis sativus L. HOM05D004236 ORTHO05D004903 5.8e-37 157.5 114 71.1
Gohir.D07G079800 Gossypium hirsutum HOM05D004236 ORTHO05D004903 5.8e-37 157.5 113 67.3
Hund13695 Selenicereus undatus HOM05D004236 ORTHO05D004903 5.8e-37 157.5 108 74.1
TAR629G1587 Trochodendron aralioides HOM05D004236 ORTHO05D004903 5.8e-37 157.5 111 71.2
Gorai.001G084600 Gossypium raimondii HOM05D004236 ORTHO05D004903 7.6e-37 157.1 113 67.3
Prupe.3G150900 Prunus persica HOM05D004236 ORTHO05D004903 7.6e-37 157.1 111 70.3
Sed0025807 Sechium edule HOM05D004236 ORTHO05D004903 7.6e-37 157.1 111 71.2
Nitab4.5_0000901g0060 Nicotiana tabacum HOM05D004236 ORTHO05D004903 9.9e-37 156.8 106 71.7
HanXRQChr09g0262441 Helianthus annuus HOM05D004236 ORTHO05D004903 1.3e-36 156.4 111 68.5
TAR622G0693 Trochodendron aralioides HOM05D004236 ORTHO05D004903 1.3e-36 156.4 112 68.8
C06p39930 Brassica napus HOM05D004236 ORTHO05D004903 1.7e-36 156.0 111 67.6
BraA07t30978Z Brassica rapa HOM05D004236 ORTHO05D004903 1.7e-36 156.0 111 67.6
A07p33520 Brassica napus HOM05D004236 ORTHO05D004903 2.2e-36 155.6 111 67.6
Lj2A437T35 Lonicera japonica HOM05D004236 ORTHO05D004903 2.9e-36 155.2 111 70.3
Atru.chr1.1563 Acer truncatum HOM05D004236 ORTHO05D004903 3.8e-36 154.8 112 70.5
Thhalv10018777m.g Eutrema salsugineum HOM05D004236 ORTHO05D004903 3.8e-36 154.8 119 66.4
Aa31LG2G3180 Aethionema arabicum HOM05D004236 ORTHO05D004903 4.9e-36 154.5 117 67.5
BcaC08g46105 Brassica carinata HOM05D004236 ORTHO05D004903 4.9e-36 154.5 113 66.4
BolC6t39081H Brassica oleracea HOM05D004236 ORTHO05D004903 4.9e-36 154.5 113 66.4
Lj1g0012263 Lotus japonicus HOM05D004236 ORTHO05D004903 4.9e-36 154.5 111 70.3
MBI16_g21181_MAGBIO Magnolia biondii HOM05D004236 ORTHO05D004903 4.9e-36 154.5 111 64.0
THA.LOC104822473 Tarenaya hassleriana HOM05D004236 ORTHO05D004903 4.9e-36 154.5 111 67.6
Lsat_1_v5_gn_4_156001 Lactuca sativa HOM05D004236 ORTHO05D004903 8.4e-36 153.7 111 73.0
Sp5g21620 Schrenkiella parvula HOM05D004236 ORTHO05D004903 1.1e-35 153.3 121 64.5
THA.LOC104805594 Tarenaya hassleriana HOM05D004236 ORTHO05D004903 1.9e-35 152.5 115 67.8
BcaB03g15254 Brassica carinata HOM05D004236 ORTHO05D004903 2.4e-35 152.1 113 68.1
FAN23G2326 Fragaria x ananassa HOM05D004236 ORTHO05D004903 3.2e-35 151.8 112 66.1
ECA232G1241 Erigeron canadensis HOM05D004236 ORTHO05D004903 4.2e-35 151.4 110 67.3
FAN26G2772 Fragaria x ananassa HOM05D004236 ORTHO05D004903 4.2e-35 151.4 112 66.1
Carub.0002s1288 Capsella rubella HOM05D004236 ORTHO05D004903 5.4e-35 151.0 119 65.5
CARHR058730 Cardamine hirsuta HOM05D004236 ORTHO05D004903 5.4e-35 151.0 116 64.7
Nn3g18026 Nelumbo nucifera HOM05D004236 ORTHO05D004903 9.3e-35 150.2 112 67.9
FvH4_1g29040 Fragaria vesca HOM05D004236 ORTHO05D004903 1.2e-34 149.8 112 66.1
FAN19G1079 Fragaria x ananassa HOM05D004236 ORTHO05D004903 1.2e-34 149.8 112 66.1
AL2G24640 Arabidopsis lyrata HOM05D004236 ORTHO05D004903 1.6e-34 149.4 120 62.5
ATR0326G065 Amborella trichopoda HOM05D004236 ORTHO05D004903 2.1e-34 149.1 109 66.1
RcHm_v2.0_Chr3g0493661 Rosa chinensis HOM05D004236 ORTHO05D004903 4.6e-34 147.9 112 67.0
AT1G66680 Arabidopsis thaliana HOM05D004236 ORTHO05D004903 1.0e-33 146.7 120 64.2
PSO478G1960 Papaver somniferum HOM05D004236 ORTHO05D004903 3.9e-33 144.8 111 64.9
PSO017G0657 Papaver somniferum HOM05D004236 ORTHO05D004903 5.1e-33 144.4 110 64.5
MD17G1253400 Malus domestica HOM05D004236 ORTHO05D004903 1.1e-32 143.3 111 66.7
Lsat_1_v5_gn_2_81141 Lactuca sativa HOM05D004236 ORTHO05D004903 1.9e-32 142.5 107 67.3
TWI77G0072 Tripterygium wilfordii HOM05D004236 ORTHO05D004903 4.8e-31 137.9 112 61.6
Lsat_1_v5_gn_4_15520 Lactuca sativa HOM05D004236 ORTHO05D004903 6.2e-31 137.5 107 66.4
ECA238G4753 Erigeron canadensis HOM05D004236 ORTHO05D004903 9.9e-29 130.2 108 61.1
GSVIVG01011790001 Vitis vinifera HOM05D004236 ORTHO05D004903 2.2e-28 129.0 112 62.5
Nitab4.5_0000625g0030 Nicotiana tabacum HOM05D004236 ORTHO05D004903 8.4e-28 127.1 111 58.6
HPP92_023113 Vanilla planifolia HOM05D004236 ORTHO05D004903 2.4e-27 125.6 111 58.6
Zm00001eb156450 Zea mays HOM05D004236 ORTHO05D004903 2.4e-27 125.6 109 57.8
Pp3c15_25630 Physcomitrium patens HOM05D004236 ORTHO05D004903 5.5e-27 124.4 112 57.1
CDE04G0933 Ceratophyllum demersum HOM05D004236 ORTHO05D004903 3.0e-25 118.6 87 65.5
Os01g0121100 Oryza sativa ssp. japonica HOM05D004236 ORTHO05D004903 1.1e-24 116.7 107 54.2
MELO3C020314.2 Cucumis melo HOM05D004236 ORTHO05D004903 1.9e-24 115.9 153 47.7
MBI10_g41074_MAGBIO Magnolia biondii HOM05D004236 ORTHO05D004903 4.3e-24 114.8 109 52.3
Mapoly0105s0009 Marchantia polymorpha HOM05D004236 ORTHO05D004903 4.3e-24 114.8 117 49.6
SMO340G0155 Selaginella moellendorffii HOM05D004236 ORTHO05D004903 8.2e-23 110.5 116 52.6
SEGI_21262 Sequoiadendron giganteum HOM05D004236 ORTHO05D004903 2.2e-20 102.4 104 52.9
Nn1g02732 Nelumbo nucifera HOM05D004236 ORTHO05D004903 3.8e-20 101.7 58 79.3
SHI07804 Sapria himalayana HOM05D004236 ORTHO05D004903 6.0e-18 94.4 201 33.3
Os01g0686400 Oryza sativa ssp. japonica HOM05D004236 ORTHO05D004903 4.1e-14 81.6 83 49.4
CBR_g26148 Chara braunii HOM05D004236 ORTHO05D004903 1.9e-11 72.8 170 31.2
Dinv14861 Davidia involucrata HOM05D004236 ORTHO05D004903 9.4e-11 70.5 43 74.4
BcaC03g14751 Brassica carinata HOM05D004236 ORTHO05D032721 1.6e-10 69.7 41 80.5
Sc11g0008520 Simmondsia chinensis HOM05D004236 ORTHO05D004903 7.9e-10 67.4 36 80.6
Actinidia17648 Actinidia chinensis HOM05D004236 ORTHO05D004903 1.4e-09 66.6 36 77.8


User provided reference genes

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