Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038720.1 Olea europaea HOM05D001655 ORTHO05D001567 1.7e-41 172.6 106 100.0
CAN.G1225.4 Capsicum annuum HOM05D001655 ORTHO05D001567 4.1e-08 61.6 39 74.4
Haze_21087 Corylus avellana HOM05D001655 ORTHO05D001567 5.4e-08 61.2 38 81.6
FvH4_6g10620 Fragaria vesca HOM05D001655 ORTHO05D001567 7.1e-08 60.8 39 76.9
FAN09G4853 Fragaria x ananassa HOM05D001655 ORTHO05D001567 7.1e-08 60.8 39 76.9
FAN14G5047 Fragaria x ananassa HOM05D001655 ORTHO05D001567 7.1e-08 60.8 39 76.9
RcHm_v2.0_Chr3g0461621 Rosa chinensis HOM05D001655 ORTHO05D001567 7.1e-08 60.8 39 76.9
Cpa.g.sc5.238 Carica papaya HOM05D001655 ORTHO05D001567 1.6e-07 59.7 36 83.3
Dinv12167 Davidia involucrata HOM05D001655 ORTHO05D001567 1.6e-07 59.7 39 76.9
FAN05G0167 Fragaria x ananassa HOM05D001655 ORTHO05D001567 1.6e-07 59.7 39 74.4
FAN05G1553 Fragaria x ananassa HOM05D001655 ORTHO05D001567 1.6e-07 59.7 39 74.4
Manes.08G097000 Manihot esculenta HOM05D001655 ORTHO05D001567 1.6e-07 59.7 36 83.3
Manes.09G111500 Manihot esculenta HOM05D001655 ORTHO05D001567 1.6e-07 59.7 39 76.9
Actinidia11550 Actinidia chinensis HOM05D001655 ORTHO05D001567 2.1e-07 59.3 39 76.9
Duzib128G1918 Durio zibethinus HOM05D001655 ORTHO05D001567 2.1e-07 59.3 39 74.4
Sp6g40910 Schrenkiella parvula HOM05D001655 ORTHO05D001567 2.1e-07 59.3 36 75.0
Aqoxy2G00774 Aquilegia oxysepala HOM05D001655 ORTHO05D001567 2.7e-07 58.9 39 74.4
Cc06_g00750 Coffea canephora HOM05D001655 ORTHO05D001567 2.7e-07 58.9 39 74.4
Hma1.2p1_0501F.1_g167370 Hydrangea macrophylla HOM05D001655 ORTHO05D001567 2.7e-07 58.9 39 76.9
GSVIVG01030269001 Vitis vinifera HOM05D001655 ORTHO05D001567 2.7e-07 58.9 39 74.4
MD04G1166600 Malus domestica HOM05D001655 ORTHO05D001567 3.5e-07 58.5 39 71.8
Prupe.6G284800 Prunus persica HOM05D001655 ORTHO05D001567 3.5e-07 58.5 39 74.4
QL07p033935 Quercus lobata HOM05D001655 ORTHO05D001567 3.5e-07 58.5 39 74.4
Solyc10g076350.2 Solanum lycopersicum HOM05D001655 ORTHO05D001567 3.5e-07 58.5 39 71.8
Sopen10g027980 Solanum pennellii HOM05D001655 ORTHO05D000343 3.5e-07 58.5 39 71.8
PGSC0003DMG400015887 Solanum tuberosum HOM05D001655 ORTHO05D001567 3.5e-07 58.5 39 71.8
SGA_v2.0_scaffold85G26681 Striga asiatica HOM05D001655 ORTHO05D001567 4.6e-07 58.2 39 74.4
TWI53G0443 Tripterygium wilfordii HOM05D001655 ORTHO05D001567 4.6e-07 58.2 39 74.4
CANSAT35G1562 Cannabis sativa HOM05D001655 ORTHO05D001567 6.0e-07 57.8 36 80.6
MELO3C026027.2 Cucumis melo HOM05D001655 ORTHO05D001567 6.0e-07 57.8 36 77.8
Lsat_1_v5_gn_5_149261 Lactuca sativa HOM05D001655 ORTHO05D001567 6.0e-07 57.8 39 74.4
Lalb_Chr12g0207291 Lupinus albus HOM05D001655 ORTHO05D001567 6.0e-07 57.8 39 71.8
TWI74G1021 Tripterygium wilfordii HOM05D001655 ORTHO05D001567 6.0e-07 57.8 39 71.8
TAR633G1071 Trochodendron aralioides HOM05D001655 ORTHO05D001567 6.0e-07 57.8 39 74.4
Ah.12g059080 Amaranthus hybridus HOM05D001655 ORTHO05D001567 7.8e-07 57.4 36 75.0
Carub.0006s0018 Capsella rubella HOM05D001655 ORTHO05D001567 7.8e-07 57.4 36 77.8
Medtr4g014040 Medicago truncatula HOM05D001655 ORTHO05D001567 7.8e-07 57.4 36 80.6
Nn2g13266 Nelumbo nucifera HOM05D001655 ORTHO05D001567 7.8e-07 57.4 39 71.8
Nitab4.5_0000355g0190 Nicotiana tabacum HOM05D001655 ORTHO05D001567 7.8e-07 57.4 39 71.8
Nitab4.5_0003850g0010 Nicotiana tabacum HOM05D001655 ORTHO05D001567 7.8e-07 57.4 39 71.8
arahy.Tifrunner.gnm1.ann1.2R4ARY Arachis hypogaea HOM05D001655 ORTHO05D001567 1.0e-06 57.0 39 71.8
arahy.Tifrunner.gnm1.ann1.XPD3NZ Arachis hypogaea HOM05D001655 ORTHO05D001567 1.0e-06 57.0 39 71.8
MSTRG.5541 Avicennia marina HOM05D001655 ORTHO05D001567 1.0e-06 57.0 39 71.8
Duzib093G1547 Durio zibethinus HOM05D001655 ORTHO05D001567 1.0e-06 57.0 39 71.8
Duzib106G0889 Durio zibethinus HOM05D001655 ORTHO05D001567 1.0e-06 57.0 36 77.8
Gohir.A01G230000 Gossypium hirsutum HOM05D001655 ORTHO05D001567 1.0e-06 57.0 39 71.8
Gohir.D01G219900 Gossypium hirsutum HOM05D001655 ORTHO05D001567 1.0e-06 57.0 39 71.8
Gorai.002G266600 Gossypium raimondii HOM05D001655 ORTHO05D001567 1.0e-06 57.0 39 71.8
MBI15_g16139_MAGBIO Magnolia biondii HOM05D001655 ORTHO05D001567 1.0e-06 57.0 39 74.4
PGR004G0653 Punica granatum HOM05D001655 ORTHO05D001567 1.0e-06 57.0 39 71.8
Sed0013352 Sechium edule HOM05D001655 ORTHO05D001567 1.0e-06 57.0 39 69.2
TPR.G5213 Trifolium pratense HOM05D001655 ORTHO05D001567 1.0e-06 57.0 39 71.8
BcaB01g06111 Brassica carinata HOM05D001655 ORTHO05D001567 1.3e-06 56.6 36 75.0
BcaB01g06244 Brassica carinata HOM05D001655 ORTHO05D001567 1.3e-06 56.6 36 75.0
A03p00160 Brassica napus HOM05D001655 ORTHO05D001567 1.3e-06 56.6 36 75.0
C03p00310 Brassica napus HOM05D001655 ORTHO05D001567 1.3e-06 56.6 36 75.0
BolC3t12597H Brassica oleracea HOM05D001655 ORTHO05D001567 1.3e-06 56.6 36 75.0
CARHR212010 Cardamine hirsuta HOM05D001655 ORTHO05D001567 1.3e-06 56.6 36 75.0
Lsat_1_v5_gn_8_103481 Lactuca sativa HOM05D001655 ORTHO05D001567 1.3e-06 56.6 39 74.4
THA.LOC104827060 Tarenaya hassleriana HOM05D001655 ORTHO05D001567 1.3e-06 56.6 36 75.0
Thecc.05G006800 Theobroma cacao HOM05D001655 ORTHO05D001567 1.3e-06 56.6 39 69.2
Actinidia32544 Actinidia chinensis HOM05D001655 ORTHO05D001567 1.7e-06 56.2 39 69.2
Aa31LG1G23270 Aethionema arabicum HOM05D001655 ORTHO05D001567 1.7e-06 56.2 36 75.0
AT5G01650 Arabidopsis thaliana HOM05D001655 ORTHO05D001567 1.7e-06 56.2 36 75.0
CSS0037641 Camellia sinensis var. sinensis HOM05D001655 ORTHO05D001567 1.7e-06 56.2 39 74.4
Glyma.07G156500 Glycine max HOM05D001655 ORTHO05D001567 1.7e-06 56.2 39 71.8
Lj1g0013561 Lotus japonicus HOM05D001655 ORTHO05D001567 1.7e-06 56.2 39 66.7
Lj3g0013309 Lotus japonicus HOM05D001655 ORTHO05D001567 1.7e-06 56.2 39 71.8
Peaxi162Scf00264g00841 Petunia axillaris HOM05D001655 ORTHO05D001567 1.7e-06 56.2 39 66.7
Atru.chr8.2335 Acer truncatum HOM05D001655 ORTHO05D001567 2.3e-06 55.8 39 69.2
ECA236G0256 Erigeron canadensis HOM05D001655 ORTHO05D001567 2.3e-06 55.8 39 71.8
Glyma.18G207300 Glycine max HOM05D001655 ORTHO05D001567 2.3e-06 55.8 39 69.2
SGA_v2.0_scaffold75G25034 Striga asiatica HOM05D001655 ORTHO05D001567 2.3e-06 55.8 39 66.7
TAR623G0971 Trochodendron aralioides HOM05D001655 ORTHO05D001567 2.3e-06 55.8 39 71.8
VMungo1383G1192 Vigna mungo HOM05D001655 ORTHO05D001567 2.3e-06 55.8 39 69.2
Ca_13500_v3 Cicer arietinum L. HOM05D001655 ORTHO05D001567 3.0e-06 55.5 36 75.0
Glyma.U031805 Glycine max HOM05D001655 ORTHO05D001567 3.0e-06 55.5 39 69.2
Nn2g11018 Nelumbo nucifera HOM05D001655 ORTHO05D001567 3.0e-06 55.5 36 72.2
Psat7g249040 Pisum sativum HOM05D001655 ORTHO05D001567 3.0e-06 55.5 36 75.0
THA.LOC104816181 Tarenaya hassleriana HOM05D001655 ORTHO05D001567 3.0e-06 55.5 36 72.2
CSS0009284 Camellia sinensis var. sinensis HOM05D001655 ORTHO05D001567 5.1e-06 54.7 39 69.2
CiPaw.09G215300 Carya illinoinensis HOM05D001655 ORTHO05D001567 5.1e-06 54.7 36 72.2
ClCG04G006670 Citrullus lanatus HOM05D001655 ORTHO05D001567 5.1e-06 54.7 39 66.7
Ciclev10013125m.g Citrus clementina HOM05D001655 ORTHO05D001567 5.1e-06 54.7 39 66.7
DCAR_023995 Daucus carota HOM05D001655 ORTHO05D001567 5.1e-06 54.7 39 66.7
Phvul.008G092500 Phaseolus vulgaris HOM05D001655 ORTHO05D001567 5.1e-06 54.7 39 66.7
Eucgr.K02950 Eucalyptus grandis HOM05D001655 ORTHO05D001567 6.6e-06 54.3 39 69.2
Sed0017699 Sechium edule HOM05D001655 ORTHO05D001567 6.6e-06 54.3 39 66.7
Hund14930 Selenicereus undatus HOM05D001655 ORTHO05D001567 6.6e-06 54.3 39 64.1
CDE04G2421 Ceratophyllum demersum HOM05D001655 ORTHO05D001567 8.6e-06 53.9 39 69.2
CDE07G1674 Ceratophyllum demersum HOM05D001655 ORTHO05D001567 8.6e-06 53.9 39 69.2
AUR62030535 Chenopodium quinoa HOM05D001655 ORTHO05D001567 8.6e-06 53.9 39 64.1
AUR62030760 Chenopodium quinoa HOM05D001655 ORTHO05D001567 8.6e-06 53.9 39 64.1
Migut.J00096 Erythranthe guttata HOM05D001655 ORTHO05D001567 8.6e-06 53.9 39 66.7


User provided reference genes

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