Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038692.1 Olea europaea HOM05D002045 ORTHO05D002014 7.0e-234 813.5 399 100.0
Oeu022861.2 Olea europaea HOM05D002045 ORTHO05D002014 6.2e-105 385.2 446 53.1
Oeu007859.2 Olea europaea HOM05D002045 ORTHO05D002014 3.5e-52 209.9 436 34.4
Dinv32561 Davidia involucrata HOM05D002045 ORTHO05D002014 3.4e-47 193.4 268 42.2
Dinv43899 Davidia involucrata HOM05D002045 ORTHO05D002014 2.5e-45 187.2 273 41.8
Hma1.2p1_0384F.1_g141140 Hydrangea macrophylla HOM05D002045 ORTHO05D002014 1.2e-39 168.3 256 41.8
Rhsim01G0170600 Rhododendron simsii HOM05D002045 ORTHO05D002014 2.9e-38 163.7 269 39.8
Haze_15628 Corylus avellana HOM05D002045 ORTHO05D002014 3.2e-37 160.2 270 36.7
Cfa003827 Carpinus fangiana HOM05D002045 ORTHO05D002014 1.6e-36 157.9 270 36.7
CSS0034118 Camellia sinensis var. sinensis HOM05D002045 ORTHO05D002014 7.9e-36 155.6 318 36.8
MSTRG.17325 Avicennia marina HOM05D002045 ORTHO05D002014 3.0e-35 153.7 344 34.3
vmacro22514 Vaccinium macrocarpon HOM05D002045 ORTHO05D002014 1.1e-34 151.8 269 39.0
Potri.014G095700 Populus trichocarpa HOM05D002045 ORTHO05D002014 2.6e-34 150.6 272 35.7
CiPaw.02G039200 Carya illinoinensis HOM05D002045 ORTHO05D002014 3.3e-34 150.2 325 33.2
vmacro20864 Vaccinium macrocarpon HOM05D002045 ORTHO05D002014 4.4e-34 149.8 296 37.2
Sabra14G0070200 Salix brachista HOM05D002045 ORTHO05D002014 7.4e-34 149.1 353 33.4
Cc02_g39070 Coffea canephora HOM05D002045 ORTHO05D002014 5.3e-32 142.9 271 34.3
TAR629G3516 Trochodendron aralioides HOM05D002045 ORTHO05D002014 1.2e-31 141.7 281 33.5
QL04p056206 Quercus lobata HOM05D002045 ORTHO05D002014 7.7e-31 139.0 291 33.3
Thecc.01G346100 Theobroma cacao HOM05D002045 ORTHO05D002014 1.3e-30 138.3 273 33.3
Prupe.2G184400 Prunus persica HOM05D002045 ORTHO05D002014 2.2e-30 137.5 282 35.1
Ciclev10018757m.g Citrus clementina HOM05D002045 ORTHO05D002014 1.9e-29 134.4 264 37.1
Atru.chr5.629 Acer truncatum HOM05D002045 ORTHO05D002014 3.2e-29 133.7 269 34.2
COL.COLO4_06319 Corchorus olitorius HOM05D002045 ORTHO05D002014 9.4e-29 132.1 339 30.7
CAN.G986.36 Capsicum annuum HOM05D002045 ORTHO05D002014 1.2e-28 131.7 287 32.8
Duzib138G1945 Durio zibethinus HOM05D002045 ORTHO05D002014 4.7e-28 129.8 272 32.7
PGSC0003DMG401000097 Solanum tuberosum HOM05D002045 ORTHO05D002014 4.7e-28 129.8 275 34.5
Duzib133G0749 Durio zibethinus HOM05D002045 ORTHO05D002014 2.3e-27 127.5 273 33.3
Lj9A591T85 Lonicera japonica HOM05D002045 ORTHO05D002014 3.0e-27 127.1 268 34.7
RcHm_v2.0_Chr1g0359001 Rosa chinensis HOM05D002045 ORTHO05D002014 6.7e-27 125.9 294 32.3
CSS0030482 Camellia sinensis var. sinensis HOM05D002045 ORTHO05D002014 1.1e-26 125.2 250 36.0
Nn1g01817 Nelumbo nucifera HOM05D002045 ORTHO05D002014 1.5e-26 124.8 277 32.1
Ca_09498_v3 Cicer arietinum L. HOM05D002045 ORTHO05D002014 2.0e-26 124.4 260 35.0
Lj1g0007495 Lotus japonicus HOM05D002045 ORTHO05D002014 2.0e-26 124.4 260 35.0
FAN06G0660 Fragaria x ananassa HOM05D002045 ORTHO05D002014 7.5e-26 122.5 297 32.7
FvH4_7g16060 Fragaria vesca HOM05D002045 ORTHO05D002014 9.7e-26 122.1 294 32.3
FAN06G2868 Fragaria x ananassa HOM05D002045 ORTHO05D002014 9.7e-26 122.1 294 32.3
FAN03G0742 Fragaria x ananassa HOM05D002045 ORTHO05D002014 2.2e-25 120.9 294 32.0
DCAR_006968 Daucus carota HOM05D002045 ORTHO05D002014 6.3e-25 119.4 272 32.7
FAN01G0631 Fragaria x ananassa HOM05D002045 ORTHO05D002014 6.3e-25 119.4 295 32.2
Manes.05G025300 Manihot esculenta HOM05D002045 ORTHO05D002014 8.2e-25 119.0 265 33.2
MD01G1076900 Malus domestica HOM05D002045 ORTHO05D002014 1.1e-24 118.6 265 34.7
TPR.G4779 Trifolium pratense HOM05D002045 ORTHO05D002014 1.6e-23 114.8 271 32.1
SalBow3G2923 Salvia bowleyana HOM05D002045 ORTHO05D002014 3.5e-23 113.6 265 36.6
Glyma.19G254200 Glycine max HOM05D002045 ORTHO05D002014 4.5e-23 113.2 277 31.4
VMungo0331G0345 Vigna mungo HOM05D002045 ORTHO05D002014 4.5e-23 113.2 276 32.2
Nn3g19072 Nelumbo nucifera HOM05D002045 ORTHO05D002014 7.7e-23 112.5 268 32.5
CANSAT56G0136 Cannabis sativa HOM05D002045 ORTHO05D002014 1.3e-22 111.7 250 34.0
Lj3g0007856 Lotus japonicus HOM05D002045 ORTHO05D002014 1.7e-22 111.3 265 32.1
FAN10G1849 Fragaria x ananassa HOM05D002045 ORTHO05D002014 6.5e-22 109.4 294 31.3
Medtr0024s0020 Medicago truncatula HOM05D002045 ORTHO05D002014 6.5e-22 109.4 279 31.2
Lalb_Chr18g0044331 Lupinus albus HOM05D002045 ORTHO05D002014 1.1e-21 108.6 277 31.4
Sopen01g039340 Solanum pennellii HOM05D002045 ORTHO05D002014 1.1e-21 108.6 294 31.0
Psat3g003760 Pisum sativum HOM05D002045 ORTHO05D002014 2.5e-21 107.5 363 28.1
Glyma.03G256300 Glycine max HOM05D002045 ORTHO05D002014 5.5e-21 106.3 280 31.1
Ca_26753_v3 Cicer arietinum L. HOM05D002045 ORTHO05D002014 9.4e-21 105.5 285 30.9
Medtr7g117150 Medicago truncatula HOM05D002045 ORTHO05D002014 1.2e-20 105.1 271 30.6
Lj7A503T50 Lonicera japonica HOM05D002045 ORTHO05D002014 1.6e-20 104.8 289 30.4
VMungo0540G0759 Vigna mungo HOM05D002045 ORTHO05D002014 1.6e-20 104.8 281 32.0
Peaxi162Scf00843g00002 Petunia axillaris HOM05D002045 ORTHO05D002014 4.7e-20 103.2 279 30.1
Cpa.g.c29045.1 Carica papaya HOM05D002045 ORTHO05D002014 8.0e-20 102.4 271 29.9
FAN10G4210 Fragaria x ananassa HOM05D002045 ORTHO05D002014 8.0e-20 102.4 293 30.0
Manes.01G248100 Manihot esculenta HOM05D002045 ORTHO05D002014 1.0e-19 102.1 318 27.7
TWI23G0662 Tripterygium wilfordii HOM05D002045 ORTHO05D002014 1.0e-19 102.1 299 30.4
Lalb_Chr17g0342431 Lupinus albus HOM05D002045 ORTHO05D002014 1.4e-19 101.7 262 31.7
CsaV3_3G008240 Cucumis sativus L. HOM05D002045 ORTHO05D002014 1.8e-19 101.3 322 29.2
Solyc01g095590.3 Solanum lycopersicum HOM05D002045 ORTHO05D002014 2.3e-19 100.9 234 32.9
Glyma.07G057700 Glycine max HOM05D002045 ORTHO05D002014 5.2e-19 99.8 272 29.4
Glyma.16G026700 Glycine max HOM05D002045 ORTHO05D002014 6.8e-19 99.4 270 30.0
Phvul.006G111100 Phaseolus vulgaris HOM05D002045 ORTHO05D002014 6.8e-19 99.4 271 30.3
Haze_08656 Corylus avellana HOM05D002045 ORTHO05D002014 1.2e-18 98.6 259 31.7
Actinidia24707 Actinidia chinensis HOM05D002045 ORTHO05D002014 2.0e-18 97.8 137 41.6
Phvul.010G111600 Phaseolus vulgaris HOM05D002045 ORTHO05D002014 5.7e-18 96.3 273 31.9
Psat4g160280 Pisum sativum HOM05D002045 ORTHO05D002014 7.5e-18 95.9 276 32.6
MELO3C006044.2 Cucumis melo HOM05D002045 ORTHO05D002014 9.8e-18 95.5 311 30.5
Migut.B01843 Erythranthe guttata HOM05D002045 ORTHO05D002014 2.8e-17 94.0 279 33.7
Eucgr.E00071 Eucalyptus grandis HOM05D002045 ORTHO05D002014 6.3e-17 92.8 273 29.3
DCAR_025241 Daucus carota HOM05D002045 ORTHO05D002014 8.3e-17 92.4 237 28.7
TPR.G7663 Trifolium pratense HOM05D002045 ORTHO05D002014 1.1e-16 92.0 279 31.9
arahy.Tifrunner.gnm1.ann1.6FX6NP Arachis hypogaea HOM05D002045 ORTHO05D002014 1.4e-16 91.7 236 31.8
arahy.Tifrunner.gnm1.ann1.M6V3QK Arachis hypogaea HOM05D002045 ORTHO05D002014 2.4e-16 90.9 260 31.9
arahy.Tifrunner.gnm1.ann1.RJBH5A Arachis hypogaea HOM05D002045 ORTHO05D002014 2.4e-16 90.9 236 31.8
Sed0021460 Sechium edule HOM05D002045 ORTHO05D002014 5.4e-16 89.7 303 29.7
ClCG05G000970 Citrullus lanatus HOM05D002045 ORTHO05D002014 7.0e-16 89.4 324 28.7
Aqoxy7G00147 Aquilegia oxysepala HOM05D002045 ORTHO05D002014 9.1e-16 89.0 291 28.2
TWI34G1380 Tripterygium wilfordii HOM05D002045 ORTHO05D002014 2.0e-15 87.8 270 28.1
MBI06_g32756_MAGBIO Magnolia biondii HOM05D002045 ORTHO05D002014 4.5e-15 86.7 261 30.3
Manes.02G012300 Manihot esculenta HOM05D002045 ORTHO05D002014 7.7e-15 85.9 255 29.4
QL02p031368 Quercus lobata HOM05D002045 ORTHO05D002014 1.3e-14 85.1 263 28.9
Actinidia28495 Actinidia chinensis HOM05D002045 ORTHO05D002014 2.2e-14 84.3 145 37.9
Dinv38855 Davidia involucrata HOM05D002045 ORTHO05D002014 6.5e-14 82.8 265 28.7
PSO135G1064 Papaver somniferum HOM05D002045 ORTHO05D002014 3.2e-13 80.5 257 27.2
PSO384G3902 Papaver somniferum HOM05D002045 ORTHO05D002014 3.2e-13 80.5 256 27.3
CiPaw.11G123700 Carya illinoinensis HOM05D002045 ORTHO05D002014 6.1e-12 76.3 262 28.6
PGR031G1722 Punica granatum HOM05D002045 ORTHO05D002014 6.1e-12 76.3 249 29.7
RcHm_v2.0_Chr7g0195401 Rosa chinensis HOM05D002045 ORTHO05D002014 8.0e-12 75.9 275 27.3
CiPaw.12G084800 Carya illinoinensis HOM05D002045 ORTHO05D002014 5.2e-11 73.2 255 25.5
Sabra03G0099100 Salix brachista HOM05D002045 ORTHO05D002014 2.6e-10 70.9 260 28.1
Atru.chr2.761 Acer truncatum HOM05D002045 ORTHO05D002014 3.4e-10 70.5 253 27.7
Atru.chr9.2039 Acer truncatum HOM05D002045 ORTHO05D002014 3.4e-10 70.5 253 27.7
MBI07_g24336_MAGBIO Magnolia biondii HOM05D002045 ORTHO05D002014 3.4e-10 70.5 289 28.7
Potri.003G137700 Populus trichocarpa HOM05D002045 ORTHO05D002014 7.5e-10 69.3 255 27.1
Duzib205G0021 Durio zibethinus HOM05D002045 ORTHO05D002014 4.9e-09 66.6 244 28.7
Hund27218 Selenicereus undatus HOM05D002045 ORTHO05D002014 6.3e-09 66.2 267 27.7
Sed0001371 Sechium edule HOM05D002045 ORTHO05D002014 1.6e-07 61.6 269 27.1
FAN08G1238 Fragaria x ananassa HOM05D002045 ORTHO05D002014 7.7e-07 59.3 270 25.9
MD06G1102600 Malus domestica HOM05D002045 ORTHO05D002014 2.9e-06 57.4 248 27.0


User provided reference genes

Program Settings