Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 1.9e-47 192.2 98 100.0
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 2.1e-38 162.2 96 83.3
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 2.0e-36 155.6 98 79.6
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 3.3e-36 154.8 98 80.6
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 5.7e-36 154.1 98 78.6
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 1.7e-35 152.5 94 79.8
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 2.2e-35 152.1 96 80.2
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 2.8e-35 151.8 96 78.1
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 4.8e-35 151.0 92 80.4
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 1.8e-34 149.1 96 77.1
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 1.8e-34 149.1 96 78.1
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 3.1e-34 148.3 96 77.1
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 4.1e-34 147.9 96 78.1
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 5.3e-34 147.5 96 76.0
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 6.9e-34 147.1 96 77.1
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 6.9e-34 147.1 96 77.1
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 1.5e-33 146.0 94 76.6
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 3.4e-33 144.8 95 75.8
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 4.5e-33 144.4 94 75.5
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 4.5e-33 144.4 96 75.0
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 4.5e-33 144.4 94 75.5
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 4.5e-33 144.4 96 75.0
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 5.9e-33 144.1 96 72.9
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 7.7e-33 143.7 94 75.5
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.0e-32 143.3 94 75.5
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 1.0e-32 143.3 96 72.9
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 1.0e-32 143.3 96 74.0
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.0e-32 143.3 93 75.3
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 1.7e-32 142.5 90 77.8
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 1.7e-32 142.5 96 74.0
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 2.2e-32 142.1 90 77.8
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 2.2e-32 142.1 93 73.1
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.2e-32 142.1 90 77.8
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 2.9e-32 141.7 96 75.0
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 2.9e-32 141.7 96 75.0
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 3.8e-32 141.4 96 70.8
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.8e-32 141.4 90 77.8
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 3.8e-32 141.4 90 77.8
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 5.0e-32 141.0 96 72.9
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 6.5e-32 140.6 96 72.9
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 8.5e-32 140.2 96 75.0
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 1.4e-31 139.4 96 69.8
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 1.9e-31 139.0 96 72.9
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 1.9e-31 139.0 90 77.8
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 2.5e-31 138.7 92 73.9
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 2.5e-31 138.7 96 72.9
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 2.5e-31 138.7 94 72.3
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 3.2e-31 138.3 84 83.3
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 4.2e-31 137.9 96 71.9
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 5.5e-31 137.5 90 75.6
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 5.5e-31 137.5 96 71.9
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 1.2e-30 136.3 94 69.1
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 1.2e-30 136.3 94 71.3
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 1.6e-30 136.0 93 69.9
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 1.6e-30 136.0 96 70.8
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 1.6e-30 136.0 99 68.7
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 2.7e-30 135.2 93 69.9
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 3.6e-30 134.8 93 73.1
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 3.6e-30 134.8 91 70.3
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 3.6e-30 134.8 96 69.8
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 3.6e-30 134.8 94 70.2
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 4.7e-30 134.4 94 68.1
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 6.1e-30 134.0 96 68.8
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 7.9e-30 133.7 96 68.8
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 1.4e-29 132.9 92 70.7
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.8e-29 132.5 94 72.3
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 2.3e-29 132.1 92 70.7
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 3.0e-29 131.7 93 67.7
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 3.0e-29 131.7 96 68.8
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 5.1e-29 131.0 92 70.7
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 8.8e-29 130.2 97 68.0
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 8.8e-29 130.2 88 72.7
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 1.1e-28 129.8 95 67.4
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 1.5e-28 129.4 87 77.0
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 1.7e-27 125.9 92 67.4
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 3.7e-27 124.8 84 76.2
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 4.8e-27 124.4 97 64.9
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 4.8e-27 124.4 97 64.9
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 4.8e-27 124.4 97 64.9
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.4e-26 122.9 96 63.5
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 3.1e-26 121.7 97 63.9
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 1.5e-25 119.4 94 59.6
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 2.0e-25 119.0 87 64.4
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.0e-25 119.0 68 85.3
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 2.6e-25 118.6 94 59.6
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 2.6e-25 118.6 97 63.9
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 1.0e-24 116.7 87 66.7
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 1.7e-24 115.9 94 58.5
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 1.7e-24 115.9 94 58.5
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 1.7e-24 115.9 94 58.5
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 1.7e-24 115.9 94 58.5
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 2.9e-24 115.2 87 66.7
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 3.8e-24 114.8 70 74.3
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 3.8e-24 114.8 82 67.1
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 3.8e-24 114.8 75 72.0
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 3.8e-24 114.8 71 83.1
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 1.9e-23 112.5 89 65.2
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 2.5e-23 112.1 72 72.2
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 9.4e-23 110.2 125 50.4
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 2.1e-22 109.0 88 62.5
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 8.0e-22 107.1 100 56.0
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 2.3e-21 105.5 68 73.5
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 3.3e-20 101.7 84 59.5
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 4.4e-20 101.3 82 67.1
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 5.9e-17 90.9 94 47.9
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 2.9e-16 88.6 67 64.2
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 4.7e-14 81.3 97 49.5
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 3.4e-12 75.1 50 70.0


User provided reference genes

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