Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038552.2 Olea europaea HOM05D001889 ORTHO05D001853 1.1e-97 360.1 206 100.0
SalBow1G7974 Salvia bowleyana HOM05D001889 ORTHO05D001853 1.2e-40 170.6 152 71.7
SGA_v2.0_scaffold305G47995 Striga asiatica HOM05D001889 ORTHO05D001853 4.7e-40 168.7 152 70.4
Oeu055033.2 Olea europaea HOM05D001889 ORTHO05D001853 2.0e-38 163.3 152 76.3
MSTRG.26916 Avicennia marina HOM05D001889 ORTHO05D001853 9.1e-36 154.5 156 71.8
Dinv37513 Davidia involucrata HOM05D001889 ORTHO05D001853 5.0e-34 148.7 158 63.9
Nitab4.5_0000798g0110 Nicotiana tabacum HOM05D001889 ORTHO05D001853 5.0e-34 148.7 155 68.4
Peaxi162Scf00074g00634 Petunia axillaris HOM05D001889 ORTHO05D001853 1.5e-33 147.1 157 67.5
CAN.G567.15 Capsicum annuum HOM05D001889 ORTHO05D001853 3.3e-33 146.0 155 64.5
Migut.A00620 Erythranthe guttata HOM05D001889 ORTHO05D001853 3.3e-33 146.0 158 65.2
Lj2A163G58 Lonicera japonica HOM05D001889 ORTHO05D001853 3.3e-33 146.0 155 67.1
Nitab4.5_0008496g0020 Nicotiana tabacum HOM05D001889 ORTHO05D001853 4.2e-33 145.6 154 66.9
Sopen08g030830 Solanum pennellii HOM05D001889 ORTHO05D001853 3.6e-32 142.5 159 59.1
Actinidia22175 Actinidia chinensis HOM05D001889 ORTHO05D001853 4.7e-32 142.1 154 63.6
Solyc08g082580.3 Solanum lycopersicum HOM05D001889 ORTHO05D001853 4.7e-32 142.1 160 59.4
PGSC0003DMG400012264 Solanum tuberosum HOM05D001889 ORTHO05D001853 4.7e-32 142.1 155 57.4
unitig_748.g7694 Utricularia gibba HOM05D001889 ORTHO05D001853 6.1e-32 141.7 155 62.6
HanXRQChr17g0534971 Helianthus annuus HOM05D001889 ORTHO05D001853 1.2e-30 137.5 160 56.2
Cc08_g16290 Coffea canephora HOM05D001889 ORTHO05D001853 3.4e-30 136.0 165 60.6
CSS0033415 Camellia sinensis var. sinensis HOM05D001889 ORTHO05D001853 4.4e-30 135.6 161 60.2
PGR042G3002 Punica granatum HOM05D001889 ORTHO05D001853 4.4e-30 135.6 149 57.0
Ah.12g052720 Amaranthus hybridus HOM05D001889 ORTHO05D001853 2.2e-29 133.3 155 61.9
Glyma.05G218100 Glycine max HOM05D001889 ORTHO05D001853 2.8e-29 132.9 151 61.6
AT4G10920 Arabidopsis thaliana HOM05D001889 ORTHO05D001853 4.9e-29 132.1 152 48.7
Lsat_1_v5_gn_3_11280 Lactuca sativa HOM05D001889 ORTHO05D001853 4.9e-29 132.1 162 59.3
Glyma.08G024200 Glycine max HOM05D001889 ORTHO05D001853 1.1e-28 131.0 151 59.6
Carub.0006s2966 Capsella rubella HOM05D001889 ORTHO05D001853 1.4e-28 130.6 152 59.2
Duzib068G1189 Durio zibethinus HOM05D001889 ORTHO05D001853 1.4e-28 130.6 152 55.3
Phvul.002G300000 Phaseolus vulgaris HOM05D001889 ORTHO05D001853 1.4e-28 130.6 151 59.6
Sc22g0004890 Simmondsia chinensis HOM05D001889 ORTHO05D001853 1.8e-28 130.2 157 59.9
GSVIVG01019561001 Vitis vinifera HOM05D001889 ORTHO05D001853 1.8e-28 130.2 152 48.7
Thhalv10029021m.g Eutrema salsugineum HOM05D001889 ORTHO05D001853 2.4e-28 129.8 153 56.2
Hma1.2p1_0440F.1_g153470 Hydrangea macrophylla HOM05D001889 ORTHO05D001853 5.4e-28 128.6 163 58.9
Haze_09091 Corylus avellana HOM05D001889 ORTHO05D001853 7.0e-28 128.3 152 55.9
Rhsim02G0246500 Rhododendron simsii HOM05D001889 ORTHO05D001853 7.0e-28 128.3 166 51.2
MD06G1110000 Malus domestica HOM05D001889 ORTHO05D001853 9.2e-28 127.9 152 47.4
Sp6g06580 Schrenkiella parvula HOM05D001889 ORTHO05D001853 9.2e-28 127.9 152 53.9
Cfa011982 Carpinus fangiana HOM05D001889 ORTHO05D001853 1.2e-27 127.5 152 55.3
AL6G45010 Arabidopsis lyrata HOM05D001889 ORTHO05D001853 1.6e-27 127.1 154 51.3
CDE10G1213 Ceratophyllum demersum HOM05D001889 ORTHO05D001853 4.5e-27 125.6 152 53.3
MD14G1131000 Malus domestica HOM05D001889 ORTHO05D001853 4.5e-27 125.6 152 46.7
Aa31LG9G11200 Aethionema arabicum HOM05D001889 ORTHO05D001853 1.0e-26 124.4 152 53.3
arahy.Tifrunner.gnm1.ann1.VRDQ1B Arachis hypogaea HOM05D001889 ORTHO05D001853 1.0e-26 124.4 151 47.7
A03p29220 Brassica napus HOM05D001889 ORTHO05D001853 1.0e-26 124.4 152 57.9
BraA03t12117Z Brassica rapa HOM05D001889 ORTHO05D001853 1.0e-26 124.4 152 57.9
Lalb_Chr09g0332241 Lupinus albus HOM05D001889 ORTHO05D001853 1.0e-26 124.4 153 56.2
CiPaw.11G119000 Carya illinoinensis HOM05D001889 ORTHO05D001853 1.3e-26 124.0 152 55.3
Nn3g18977 Nelumbo nucifera HOM05D001889 ORTHO05D001853 1.3e-26 124.0 162 57.4
HPP92_027159 Vanilla planifolia HOM05D001889 ORTHO05D001853 1.7e-26 123.6 162 51.2
C03p35280 Brassica napus HOM05D001889 ORTHO05D001853 2.3e-26 123.2 152 51.3
TWI81G0658 Tripterygium wilfordii HOM05D001889 ORTHO05D001853 2.3e-26 123.2 160 51.2
arahy.Tifrunner.gnm1.ann1.18SJMB Arachis hypogaea HOM05D001889 ORTHO05D001853 2.9e-26 122.9 151 47.0
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 3.8e-26 122.5 149 57.7
TAR629G1262 Trochodendron aralioides HOM05D001889 ORTHO05D001853 3.8e-26 122.5 157 46.5
BcaC01g04652 Brassica carinata HOM05D001889 ORTHO05D001853 5.0e-26 122.1 152 53.9
BolC3t15839H Brassica oleracea HOM05D001889 ORTHO05D001853 5.0e-26 122.1 152 53.9
EL10Ac5g12940 Beta vulgaris HOM05D001889 ORTHO05D001853 8.6e-26 121.3 160 58.1
ECA246G2653 Erigeron canadensis HOM05D001889 ORTHO05D001853 1.5e-25 120.6 134 62.7
HanXRQChr10g0313221 Helianthus annuus HOM05D001889 ORTHO05D001853 1.9e-25 120.2 147 53.7
BcaB01g02728 Brassica carinata HOM05D001889 ORTHO05D001853 2.5e-25 119.8 152 52.6
CANSAT21G0525 Cannabis sativa HOM05D001889 ORTHO05D001853 2.5e-25 119.8 152 53.3
CARHR255690 Cardamine hirsuta HOM05D001889 ORTHO05D001853 2.5e-25 119.8 152 46.7
VMungo0251G0223 Vigna mungo HOM05D001889 ORTHO05D001853 3.3e-25 119.4 152 53.9
Ciclev10023952m.g Citrus clementina HOM05D001889 ORTHO05D001853 5.6e-25 118.6 152 55.9
Manes.02G008100 Manihot esculenta HOM05D001889 ORTHO05D001853 5.6e-25 118.6 152 45.4
Aqoxy7G00073 Aquilegia oxysepala HOM05D001889 ORTHO05D001853 9.5e-25 117.9 163 47.9
THA.LOC104806442 Tarenaya hassleriana HOM05D001889 ORTHO05D001853 9.5e-25 117.9 152 47.4
TAR375G1146 Trochodendron aralioides HOM05D001889 ORTHO05D001853 2.1e-24 116.7 159 54.1
Gohir.D03G084300 Gossypium hirsutum HOM05D001889 ORTHO05D001853 2.8e-24 116.3 152 53.3
Gorai.003G078300 Gossypium raimondii HOM05D001889 ORTHO05D001853 2.8e-24 116.3 152 53.3
Lj4g0003743 Lotus japonicus HOM05D001889 ORTHO05D001853 2.8e-24 116.3 151 51.0
Prupe.5G122900 Prunus persica HOM05D001889 ORTHO05D001853 3.6e-24 115.9 152 50.0
Cpa.g.sc634.3 Carica papaya HOM05D001889 ORTHO05D001853 4.7e-24 115.5 156 51.9
Gohir.A02G099400 Gossypium hirsutum HOM05D001889 ORTHO05D001853 8.0e-24 114.8 152 53.9
Eucgr.E00884 Eucalyptus grandis HOM05D001889 ORTHO05D001853 4.0e-23 112.5 160 50.0
Psat7g024960 Pisum sativum HOM05D001889 ORTHO05D001853 4.0e-23 112.5 153 48.4
Sed0020938 Sechium edule HOM05D001889 ORTHO05D001853 4.0e-23 112.5 152 55.3
Zm00001eb361130 Zea mays HOM05D001889 ORTHO05D001853 8.9e-23 111.3 168 52.4
Ca_17466_v3 Cicer arietinum L. HOM05D001889 ORTHO05D001853 1.5e-22 110.5 156 51.9
ClCG07G011480 Citrullus lanatus HOM05D001889 ORTHO05D001853 1.5e-22 110.5 152 43.4
ATR0602G135 Amborella trichopoda HOM05D001889 ORTHO05D001853 2.0e-22 110.2 153 43.8
FvH4_5g04940 Fragaria vesca HOM05D001889 ORTHO05D001853 2.0e-22 110.2 152 40.8
FAN18G0531 Fragaria x ananassa HOM05D001889 ORTHO05D001853 2.0e-22 110.2 152 40.8
FAN18G4029 Fragaria x ananassa HOM05D001889 ORTHO05D001853 2.0e-22 110.2 152 45.4
FAN13G2042 Fragaria x ananassa HOM05D001889 ORTHO05D001853 2.6e-22 109.8 152 43.4
Thecc.03G300800 Theobroma cacao HOM05D001889 ORTHO05D001853 2.6e-22 109.8 152 49.3
CsaV3_4G006740 Cucumis sativus L. HOM05D001889 ORTHO05D001853 4.4e-22 109.0 152 46.7
QL02p030019 Quercus lobata HOM05D001889 ORTHO05D001853 5.8e-22 108.6 152 53.9
Medtr8g099650 Medicago truncatula HOM05D001889 ORTHO05D001853 7.5e-22 108.2 152 49.3
RcHm_v2.0_Chr7g0194131 Rosa chinensis HOM05D001889 ORTHO05D001853 1.7e-21 107.1 152 43.4
FAN04G1520 Fragaria x ananassa HOM05D001889 ORTHO05D001853 3.7e-21 105.9 153 39.2
Os01g0706000 Oryza sativa ssp. japonica HOM05D001889 ORTHO05D001853 3.7e-21 105.9 166 52.4
Ca_09513_v3 Cicer arietinum L. HOM05D001889 ORTHO05D001853 6.4e-21 105.1 152 41.4
Ca_30063_v3 Cicer arietinum L. HOM05D001889 ORTHO05D001853 6.4e-21 105.1 152 41.4
TPR.G3382 Trifolium pratense HOM05D001889 ORTHO05D001853 6.4e-21 105.1 151 47.0
Sabra01G0065500 Salix brachista HOM05D001889 ORTHO05D001853 1.8e-20 103.6 155 43.2
vmacro11337 Vaccinium macrocarpon HOM05D001889 ORTHO05D001853 1.8e-20 103.6 144 58.3
Potri.001G089400 Populus trichocarpa HOM05D001889 ORTHO05D001853 5.4e-20 102.1 152 42.8
COL.COLO4_10729 Corchorus olitorius HOM05D001889 ORTHO05D001853 7.0e-20 101.7 132 55.3
Cfa003792 Carpinus fangiana HOM05D001889 ORTHO05D001853 9.2e-20 101.3 164 42.7
AUR62010864 Chenopodium quinoa HOM05D001889 ORTHO05D001853 9.2e-20 101.3 152 41.4
FAN10G4194 Fragaria x ananassa HOM05D001889 ORTHO05D001853 2.7e-19 99.8 152 40.8
COL.COLO4_06276 Corchorus olitorius HOM05D001889 ORTHO05D001853 3.5e-19 99.4 152 38.8
Haze_15668 Corylus avellana HOM05D001889 ORTHO05D001853 6.0e-19 98.6 164 48.2
Gorai.007G109200 Gossypium raimondii HOM05D001889 ORTHO05D001853 7.8e-19 98.2 152 38.2
TPR.G4688 Trifolium pratense HOM05D001889 ORTHO05D001853 1.0e-18 97.8 152 40.1
MELO3C006017.2 Cucumis melo HOM05D001889 ORTHO05D001853 1.3e-18 97.4 187 34.2
RcHm_v2.0_Chr1g0359981 Rosa chinensis HOM05D001889 ORTHO05D001853 1.3e-18 97.4 152 38.8
Ciclev10020119m.g Citrus clementina HOM05D001889 ORTHO05D001853 1.7e-18 97.1 152 37.5
Prupe.2G189900 Prunus persica HOM05D001889 ORTHO05D001853 1.7e-18 97.1 152 36.8
CsaV3_3G007990 Cucumis sativus L. HOM05D001889 ORTHO05D001853 3.0e-18 96.3 187 33.7
Lj1g0012362 Lotus japonicus HOM05D001889 ORTHO05D001853 3.9e-18 95.9 152 40.1
FvH4_7g16761 Fragaria vesca HOM05D001889 ORTHO05D001853 6.6e-18 95.1 152 39.5
CANSAT56G4277 Cannabis sativa HOM05D001889 ORTHO05D001853 1.1e-17 94.4 187 38.5
arahy.Tifrunner.gnm1.ann1.JQ1PN1 Arachis hypogaea HOM05D001889 ORTHO05D001853 1.9e-17 93.6 152 36.8
arahy.Tifrunner.gnm1.ann1.QJF382 Arachis hypogaea HOM05D001889 ORTHO05D001853 3.3e-17 92.8 152 36.8
PSO063G0572 Papaver somniferum HOM05D001889 ORTHO05D001853 3.3e-17 92.8 183 43.7
PSO135G1027 Papaver somniferum HOM05D001889 ORTHO05D001853 4.3e-17 92.4 159 43.4
Psat3g002280 Pisum sativum HOM05D001889 ORTHO05D001853 5.6e-17 92.0 159 36.5
MD01G1082500 Malus domestica HOM05D001889 ORTHO05D001853 7.3e-17 91.7 155 37.4
Atru.chr5.680 Acer truncatum HOM05D001889 ORTHO05D001853 1.6e-16 90.5 154 39.0
Potri.002G171900 Populus trichocarpa HOM05D001889 ORTHO05D001853 2.1e-16 90.1 153 34.0
Sed0013045 Sechium edule HOM05D001889 ORTHO05D001853 4.7e-16 89.0 152 36.8
PSO384G4805 Papaver somniferum HOM05D001889 ORTHO05D001853 8.0e-16 88.2 168 45.8
VMungo0540G1992 Vigna mungo HOM05D001889 ORTHO05D001853 1.4e-15 87.4 152 39.5
Glyma.03G258000 Glycine max HOM05D001889 ORTHO05D001853 3.1e-15 86.3 159 44.7
Manes.05G022100 Manihot esculenta HOM05D001889 ORTHO05D001853 4.0e-15 85.9 159 35.2
Psat3g002320 Pisum sativum HOM05D001889 ORTHO05D001853 5.2e-15 85.5 163 41.7
CSS0024595 Camellia sinensis var. sinensis HOM05D001889 ORTHO05D001853 8.9e-15 84.7 153 37.3
Glyma.19G256500 Glycine max HOM05D001889 ORTHO05D001853 8.9e-15 84.7 154 39.0
QL04p060477 Quercus lobata HOM05D001889 ORTHO05D001853 1.2e-14 84.3 153 48.4
Lj1g0006055 Lotus japonicus HOM05D000005 ORTHO05D001853 1.5e-14 84.0 113 46.9
Lalb_Chr15g0076301 Lupinus albus HOM05D001889 ORTHO05D001853 1.5e-14 84.0 152 34.9
Sabra02G0140800 Salix brachista HOM05D001889 ORTHO05D001853 1.5e-14 84.0 153 31.4
Eucgr.E00048 Eucalyptus grandis HOM05D001889 ORTHO05D001853 7.5e-14 81.6 154 36.4
CAN.G567.16 Capsicum annuum HOM05D001889 ORTHO05D001853 1.3e-13 80.9 67 65.7
AUR62019863 Chenopodium quinoa HOM05D001889 ORTHO05D001853 6.4e-13 78.6 152 35.5
Psat7g024920 Pisum sativum HOM05D001889 ORTHO05D001853 6.4e-13 78.6 132 44.7
Eucgr.D01760 Eucalyptus grandis HOM05D001889 ORTHO05D001853 8.3e-13 78.2 153 32.0
Actinidia27561 Actinidia chinensis HOM05D001889 ORTHO05D001853 1.4e-12 77.4 157 36.3
Cc02_g39460 Coffea canephora HOM05D001889 ORTHO05D001853 1.2e-11 74.3 153 34.0
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 2.7e-11 73.2 91 46.2
SEGI_18499 Sequoiadendron giganteum HOM05D001889 ORTHO05D001853 2.7e-11 73.2 202 32.7
SMO353G0044 Selaginella moellendorffii HOM05D001889 ORTHO05D001853 3.5e-11 72.8 151 35.8
VMungo0540G2283 Vigna mungo HOM05D001889 ORTHO05D001853 3.5e-11 72.8 110 48.2
ECA236G4907 Erigeron canadensis HOM05D001889 ORTHO05D001853 1.0e-10 71.2 149 32.2
Rhsim01G0173700 Rhododendron simsii HOM05D001889 ORTHO05D001853 1.7e-10 70.5 146 33.6
Migut.B01883 Erythranthe guttata HOM05D001889 ORTHO05D001853 3.0e-10 69.7 160 30.6
Lj9A599G37 Lonicera japonica HOM05D001889 ORTHO05D001853 3.9e-10 69.3 153 30.7
Zm00001eb155390 Zea mays HOM05D001889 ORTHO05D001853 3.9e-10 69.3 149 40.9
DCAR_018011 Daucus carota HOM05D001889 ORTHO05D001853 8.6e-10 68.2 104 53.8
Pp3c27_5970 Physcomitrium patens HOM05D001889 ORTHO05D001853 8.6e-10 68.2 193 30.6
Psat0s1094g0120 Pisum sativum HOM05D001889 ORTHO05D001853 1.5e-09 67.4 59 57.6
MELO3C016275.2 Cucumis melo HOM05D001889 ORTHO05D001853 3.3e-09 66.2 101 40.6
Aa31LG5G980 Aethionema arabicum HOM05D001889 ORTHO05D001853 5.6e-09 65.5 154 30.5
Lsat_1_v5_gn_7_961 Lactuca sativa HOM05D003602 ORTHO05D004808 9.5e-09 64.7 145 31.7
Sc01g0002620 Simmondsia chinensis HOM05D001889 ORTHO05D001853 9.5e-09 64.7 155 30.3
Sp6g01170 Schrenkiella parvula HOM05D001889 ORTHO05D001853 8.1e-08 61.6 150 32.0
Nitab4.5_0004506g0040 Nicotiana tabacum HOM05D001889 ORTHO05D001853 1.1e-07 61.2 155 25.2
TPR.G29353 Trifolium pratense HOM05D001889 ORTHO05D001853 1.1e-07 61.2 60 56.7
AagrBONN_evm.TU.Sc2ySwM_228.5176 Anthoceros agrestis HOM05D001889 ORTHO05D001853 3.1e-07 59.7 179 26.8
Mapoly0004s0058 Marchantia polymorpha HOM05D001889 ORTHO05D001853 5.2e-07 58.9 206 26.2
Thhalv10029236m.g Eutrema salsugineum HOM05D001889 ORTHO05D001853 2.0e-06 57.0 142 31.0
A09p00300 Brassica napus HOM05D001889 ORTHO05D001853 2.6e-06 56.6 142 31.7
TWI15G0999 Tripterygium wilfordii HOM05D011058 ORTHO05D013148 2.6e-06 56.6 60 50.0
EL10Ac1g00257 Beta vulgaris HOM05D001889 ORTHO05D001853 3.4e-06 56.2 158 27.2
SGA_v2.0_scaffold5G03026 Striga asiatica HOM05D001889 ORTHO05D001853 3.4e-06 56.2 150 28.0
BolC9t53028H Brassica oleracea HOM05D001889 ORTHO05D001853 4.4e-06 55.8 142 31.7
HanXRQChr06g0170781 Helianthus annuus HOM05D001889 ORTHO05D001853 5.8e-06 55.5 139 30.2
Migut.A01202 Erythranthe guttata HOM05D001889 ORTHO05D001853 7.5e-06 55.1 62 43.5
DCAR_005395 Daucus carota HOM05D001889 ORTHO05D001853 9.9e-06 54.7 193 22.3
Hma1.2p1_3248F.1_g334400 Hydrangea macrophylla HOM05D001889 ORTHO05D001853 9.9e-06 54.7 66 43.9


User provided reference genes

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