Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038464.1 Olea europaea HOM05D007170 ORTHO05D009243 0.0e+00 2891.7 1480 100.0
SalBow8G4071 Salvia bowleyana HOM05D007170 ORTHO05D009243 0.0e+00 1628.6 1579 57.5
SGA_v2.0_scaffold172G38980 Striga asiatica HOM05D007170 ORTHO05D009243 0.0e+00 1588.2 1657 54.6
Actinidia06806 Actinidia chinensis HOM05D007170 ORTHO05D009243 0.0e+00 1551.2 1563 55.7
Sopen01g040790 Solanum pennellii HOM05D007170 ORTHO05D009243 0.0e+00 1542.3 1559 55.4
Solyc01g097110.2 Solanum lycopersicum HOM05D007170 ORTHO05D009243 0.0e+00 1525.8 1560 55.0
Nitab4.5_0002247g0080 Nicotiana tabacum HOM05D007170 ORTHO05D009243 0.0e+00 1525.4 1593 54.8
TAR626G1158 Trochodendron aralioides HOM05D007170 ORTHO05D009243 0.0e+00 1510.7 1532 55.7
Peaxi162Scf00647g00012 Petunia axillaris HOM05D007170 ORTHO05D009243 0.0e+00 1501.5 1602 54.2
Prupe.3G191100 Prunus persica HOM05D007170 ORTHO05D009243 0.0e+00 1492.6 1549 53.5
Cfa020492 Carpinus fangiana HOM05D007170 ORTHO05D009243 0.0e+00 1486.9 1562 53.6
Potri.006G023500 Populus trichocarpa HOM05D007170 ORTHO05D009243 0.0e+00 1478.0 1567 53.2
Haze_09546 Corylus avellana HOM05D007170 ORTHO05D009243 0.0e+00 1474.9 1538 53.8
MD09G1135500 Malus domestica HOM05D007170 ORTHO05D009243 0.0e+00 1473.4 1549 52.9
RcHm_v2.0_Chr2g0154431 Rosa chinensis HOM05D007170 ORTHO05D009243 0.0e+00 1469.9 1506 53.5
Nn3g20634 Nelumbo nucifera HOM05D007170 ORTHO05D009243 0.0e+00 1465.3 1397 57.3
Sabra06G0017000 Salix brachista HOM05D007170 ORTHO05D009243 0.0e+00 1464.1 1567 53.2
GSVIVG01020797001 Vitis vinifera HOM05D007170 ORTHO05D009243 0.0e+00 1461.8 1569 52.8
CANSAT64G1590 Cannabis sativa HOM05D007170 ORTHO05D009243 0.0e+00 1458.7 1562 53.1
Nitab4.5_0005905g0020 Nicotiana tabacum HOM05D007170 ORTHO05D009243 0.0e+00 1457.2 1597 53.0
Cc02_g31000 Coffea canephora HOM05D007170 ORTHO05D009243 0.0e+00 1455.7 1506 54.3
DCAR_006644 Daucus carota HOM05D007170 ORTHO05D009243 0.0e+00 1439.5 1447 54.8
FvH4_6g39900 Fragaria vesca HOM05D007170 ORTHO05D009243 0.0e+00 1436.4 1384 55.8
Migut.B01114 Erythranthe guttata HOM05D007170 ORTHO05D009243 0.0e+00 1431.8 1342 59.6
Ciclev10010909m.g Citrus clementina HOM05D007170 ORTHO05D009243 0.0e+00 1408.7 1439 54.5
FAN02G4004 Fragaria x ananassa HOM05D007170 ORTHO05D009243 0.0e+00 1407.1 1535 51.5
FAN14G4936 Fragaria x ananassa HOM05D007170 ORTHO05D009243 0.0e+00 1406.0 1403 55.0
CiPaw.03G198500 Carya illinoinensis HOM05D007170 ORTHO05D009243 0.0e+00 1404.8 1483 53.3
Duzib138G0290 Durio zibethinus HOM05D007170 ORTHO05D009243 0.0e+00 1390.9 1544 52.0
Atru.chr8.950 Acer truncatum HOM05D007170 ORTHO05D009243 0.0e+00 1382.1 1510 52.1
Manes.09G075018 Manihot esculenta HOM05D007170 ORTHO05D009243 0.0e+00 1376.7 1578 50.4
Gohir.D07G192100 Gossypium hirsutum HOM05D007170 ORTHO05D009243 0.0e+00 1363.2 1534 51.5
Gorai.001G214900 Gossypium raimondii HOM05D007170 ORTHO05D009243 0.0e+00 1355.1 1534 51.4
Lsat_1_v5_gn_2_66140 Lactuca sativa HOM05D007170 ORTHO05D009243 0.0e+00 1343.2 1563 50.4
HanXRQChr10g0314771 Helianthus annuus HOM05D007170 ORTHO05D009243 0.0e+00 1339.3 1553 50.2
MBI02_g15149_MAGBIO Magnolia biondii HOM05D007170 ORTHO05D009243 0.0e+00 1331.2 1461 51.6
PGR031G3275 Punica granatum HOM05D007170 ORTHO05D009243 0.0e+00 1320.1 1560 49.1
Lj7A482G28 Lonicera japonica HOM05D007170 ORTHO05D009243 0.0e+00 1318.5 1417 53.3
Thecc.01G177100 Theobroma cacao HOM05D007170 ORTHO05D009243 0.0e+00 1312.4 1440 51.9
Sc07g0002130 Simmondsia chinensis HOM05D007170 ORTHO05D009243 0.0e+00 1304.7 1405 52.7
PSO541G2476 Papaver somniferum HOM05D007170 ORTHO05D009243 0.0e+00 1272.3 1573 48.4
Aqoxy3G00362 Aquilegia oxysepala HOM05D007170 ORTHO05D009243 0.0e+00 1266.9 1561 48.3
PSO675G2674 Papaver somniferum HOM05D007170 ORTHO05D009243 0.0e+00 1264.6 1545 48.6
Eucgr.A00891 Eucalyptus grandis HOM05D007170 ORTHO05D009243 0.0e+00 1261.5 1565 47.5
CSS0034103 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 0.0e+00 1256.5 1277 55.2
ATR1098G002 Amborella trichopoda HOM05D007170 ORTHO05D009243 0.0e+00 1242.6 1415 48.8
Thhalv10024215m.g Eutrema salsugineum HOM05D007170 ORTHO05D009243 0.0e+00 1224.2 1510 47.7
BcaB04g18275 Brassica carinata HOM05D007170 ORTHO05D009243 0.0e+00 1223.0 1405 49.6
AL7G40850 Arabidopsis lyrata HOM05D007170 ORTHO05D009243 0.0e+00 1219.1 1528 47.6
BraA08t33150Z Brassica rapa HOM05D007170 ORTHO05D009243 0.0e+00 1207.2 1400 49.4
A08p11580 Brassica napus HOM05D007170 ORTHO05D009243 0.0e+00 1204.5 1506 46.9
AT4G14970 Arabidopsis thaliana HOM05D007170 ORTHO05D009243 0.0e+00 1202.2 1528 47.0
BolC8t48255H Brassica oleracea HOM05D007170 ORTHO05D009243 0.0e+00 1192.2 1417 48.4
BcaC07g37864 Brassica carinata HOM05D007170 ORTHO05D009243 0.0e+00 1179.1 1402 48.4
ECA238G4341 Erigeron canadensis HOM05D007170 ORTHO05D009243 0.0e+00 1161.0 1395 49.7
CSS0006494 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 7.9e-299 1031.2 1027 55.8
Dinv20277 Davidia involucrata HOM05D007170 ORTHO05D009243 1.8e-290 1003.4 878 62.0
CSS0002264 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 3.7e-288 995.7 1027 54.5
Cpa.g.sc8.299 Carica papaya HOM05D007170 ORTHO05D009243 4.4e-281 972.2 1544 41.4
Zm00001eb117500 Zea mays HOM05D007170 ORTHO05D009243 4.0e-274 949.1 1328 42.6
Os07g0154400 Oryza sativa ssp. japonica HOM05D007170 ORTHO05D009243 3.7e-248 862.8 1117 44.4
SEGI_23823 Sequoiadendron giganteum HOM05D007170 ORTHO05D009243 1.3e-245 854.4 1205 42.4
Mapoly0001s0378 Marchantia polymorpha HOM05D007170 ORTHO05D009243 1.1e-231 808.1 1433 38.0
Pp3c3_20180 Physcomitrium patens HOM05D007170 ORTHO05D009243 7.9e-222 775.4 1419 36.2
Hma1.2p1_0892F.1_g233440 Hydrangea macrophylla HOM05D007170 ORTHO05D009243 8.7e-213 745.3 553 70.2
Gohir.A07G185500 Gossypium hirsutum HOM05D007170 ORTHO05D009243 6.5e-208 729.2 889 48.0
CAN.G134.71 Capsicum annuum HOM05D007170 ORTHO05D009243 3.2e-199 700.3 540 68.3
HPP92_019550 Vanilla planifolia HOM05D007170 ORTHO05D009243 2.9e-184 650.6 751 49.0
AagrBONN_evm.TU.Sc2ySwM_344.1322 Anthoceros agrestis HOM05D007170 ORTHO05D009243 1.7e-155 555.1 1154 33.5
Dinv20276 Davidia involucrata HOM05D007170 ORTHO05D009243 8.3e-147 526.2 635 49.6
CBR_g3147 Chara braunii HOM05D007170 ORTHO05D009243 1.6e-145 521.9 1024 33.9
CARHR221630 Cardamine hirsuta HOM05D007170 ORTHO05D009243 9.9e-132 476.1 401 62.1
CAN.G134.69 Capsicum annuum HOM05D007170 ORTHO05D009243 7.1e-130 469.9 661 45.5
HPP92_019551 Vanilla planifolia HOM05D007170 ORTHO05D009243 4.6e-113 414.1 633 40.0
CARHR221660 Cardamine hirsuta HOM05D007170 ORTHO05D009243 7.5e-55 220.7 313 44.4
SEGI_21897 Sequoiadendron giganteum HOM05D007170 ORTHO05D009243 1.6e-49 203.0 234 49.6
CDE07G1176 Ceratophyllum demersum HOM05D007170 ORTHO05D009243 2.5e-42 179.1 148 64.2
QL08p022040 Quercus lobata HOM05D007170 ORTHO05D009243 1.5e-39 169.9 218 47.7
Dinv20273 Davidia involucrata HOM05D007170 ORTHO05D009243 1.7e-38 166.4 346 34.7
Cpa.g.sc8.300 Carica papaya HOM05D007170 ORTHO05D009243 1.8e-32 146.4 120 60.0
Zm00001eb046090 Zea mays HOM05D007170 ORTHO05D009243 1.1e-29 137.1 210 38.1
CARHR221640 Cardamine hirsuta HOM05D007170 ORTHO05D009243 3.5e-28 132.1 203 39.9
Gohir.A07G185533 Gossypium hirsutum HOM05D007170 ORTHO05D009243 1.0e-27 130.6 206 40.8
CARHR221650 Cardamine hirsuta HOM05D007170 ORTHO05D009243 2.3e-19 102.8 200 39.0
Zm00001eb031530 Zea mays HOM05D007170 ORTHO05D009243 5.6e-18 98.2 98 49.0
Zm00001eb010760 Zea mays HOM05D007170 ORTHO05D009243 7.3e-18 97.8 98 49.0
Zm00001eb442000 Zea mays HOM05D007170 ORTHO05D009243 7.3e-18 97.8 98 49.0
MBI08_g17991_MAGBIO Magnolia biondii HOM05D007170 ORTHO05D009243 8.1e-17 94.4 86 57.0
CBR_g54165 Chara braunii HOM05D000019 ORTHO05D000048 6.4e-14 84.7 140 32.9
Carub.0007s2712 Capsella rubella HOM05D007170 ORTHO05D009243 8.3e-14 84.3 69 55.1
QL02p039588 Quercus lobata HOM05D007170 ORTHO05D009243 1.1e-13 84.0 142 39.4
CARHR221670 Cardamine hirsuta HOM05D007170 ORTHO05D009243 7.1e-13 81.3 182 32.4
COL.COLO4_06564 Corchorus olitorius HOM05D007170 ORTHO05D009243 8.6e-11 74.3 134 40.3
Zm00001eb008220 Zea mays HOM05D007170 ORTHO05D009243 1.1e-10 73.9 120 38.3
Oeu027601.1 Olea europaea HOM05D000003 ORTHO05D000004 2.1e-09 69.7 41 65.9
CDE07G1841 Ceratophyllum demersum HOM05D007170 ORTHO05D009243 2.8e-09 69.3 302 25.5
CDE07G0977 Ceratophyllum demersum HOM05D007170 ORTHO05D009243 6.2e-09 68.2 64 53.1
Oeu044182.1 Olea europaea HOM05D000003 ORTHO05D000004 6.2e-09 68.2 40 67.5
Oeu039936.1 Olea europaea HOM05D000003 ORTHO05D000004 2.4e-08 66.2 54 53.7
Oeu005734.1 Olea europaea HOM05D000003 ORTHO05D000004 3.1e-08 65.9 40 65.0
Oeu029482.1 Olea europaea HOM05D000003 ORTHO05D000004 5.2e-08 65.1 40 67.5
Oeu040057.1 Olea europaea HOM05D000003 ORTHO05D000004 5.2e-08 65.1 40 60.0
Cre10.g453650 Chlamydomonas reinhardtii HOM05D007170 ORTHO05D009243 1.2e-07 63.9 261 24.1
Oeu038971.1 Olea europaea HOM05D000003 ORTHO05D000004 3.4e-07 62.4 40 62.5
Oeu064193.1 Olea europaea HOM05D000003 ORTHO05D000004 9.9e-07 60.8 40 57.5
Oeu011316.1 Olea europaea HOM05D000003 ORTHO05D000004 2.2e-06 59.7 40 57.5
Oeu024884.1 Olea europaea HOM05D000003 ORTHO05D000004 2.2e-06 59.7 36 61.1
Oeu021161.1 Olea europaea HOM05D000003 ORTHO05D000004 4.9e-06 58.5 40 57.5
Oeu001026.1 Olea europaea HOM05D000003 ORTHO05D000004 6.4e-06 58.2 40 60.0


User provided reference genes

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