Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038443.2 Olea europaea HOM05D004404 ORTHO05D005070 4.1e-111 404.8 219 100.0
Oeu016441.1 Olea europaea HOM05D004404 ORTHO05D005070 4.2e-39 165.6 106 80.2
SGA_v2.0_scaffold80G25905 Striga asiatica HOM05D004404 ORTHO05D005070 5.9e-33 145.2 111 74.8
SalBow8G4983 Salvia bowleyana HOM05D004404 ORTHO05D005070 2.2e-32 143.3 239 45.6
Nitab4.5_0008996g0030 Nicotiana tabacum HOM05D004404 ORTHO05D005070 1.5e-31 140.6 113 69.0
Solyc01g097310.3 Solanum lycopersicum HOM05D004404 ORTHO05D005070 4.2e-31 139.0 100 75.0
Peaxi162Scf00071g00832 Petunia axillaris HOM05D004404 ORTHO05D005070 1.2e-30 137.5 138 57.2
Sopen01g040980 Solanum pennellii HOM05D004404 ORTHO05D005070 1.6e-30 137.1 100 74.0
TAR362G1272 Trochodendron aralioides HOM05D004404 ORTHO05D005070 2.1e-30 136.7 97 78.4
Peaxi162Scf00282g00419 Petunia axillaris HOM05D004404 ORTHO05D005070 2.7e-30 136.3 100 75.0
Atru.chr2.818 Acer truncatum HOM05D004404 ORTHO05D005070 3.6e-30 136.0 107 72.9
DCAR_009267 Daucus carota HOM05D004404 ORTHO05D005070 4.7e-30 135.6 105 74.3
Nitab4.5_0003279g0050 Nicotiana tabacum HOM05D004404 ORTHO05D005070 1.4e-29 134.0 123 62.6
Migut.N01913 Erythranthe guttata HOM05D004404 ORTHO05D005070 3.0e-29 132.9 217 45.6
Migut.O00778 Erythranthe guttata HOM05D004404 ORTHO05D005070 1.2e-28 131.0 217 44.7
Potri.005G053400 Populus trichocarpa HOM05D004404 ORTHO05D005070 1.2e-28 131.0 117 62.4
CiPaw.08G123500 Carya illinoinensis HOM05D004404 ORTHO05D005070 2.0e-28 130.2 105 69.5
SGA_v2.0_scaffold81G26090 Striga asiatica HOM05D004404 ORTHO05D005070 2.6e-28 129.8 257 41.6
Manes.09G153100 Manihot esculenta HOM05D004404 ORTHO05D005070 5.7e-28 128.6 106 67.0
MSTRG.28017 Avicennia marina HOM05D004404 ORTHO05D005070 7.5e-28 128.3 113 70.8
Migut.B01092 Erythranthe guttata HOM05D004404 ORTHO05D005070 9.7e-28 127.9 98 76.5
Ciclev10002770m.g Citrus clementina HOM05D004404 ORTHO05D005070 1.3e-27 127.5 100 69.0
Gorai.013G200900 Gossypium raimondii HOM05D004404 ORTHO05D005070 1.3e-27 127.5 113 64.6
Cc02_g30710 Coffea canephora HOM05D004404 ORTHO05D005070 2.2e-27 126.7 92 78.3
Medtr7g115180 Medicago truncatula HOM05D004404 ORTHO05D005070 2.2e-27 126.7 106 68.9
MD12G1241300 Malus domestica HOM05D004404 ORTHO05D005070 2.8e-27 126.3 131 60.3
Nn1g02537 Nelumbo nucifera HOM05D004404 ORTHO05D005070 2.8e-27 126.3 105 69.5
TWI12G0609 Tripterygium wilfordii HOM05D004404 ORTHO05D005070 2.8e-27 126.3 200 43.0
FvH4_6g02920 Fragaria vesca HOM05D004404 ORTHO05D005070 3.7e-27 125.9 104 67.3
FAN05G1086 Fragaria x ananassa HOM05D004404 ORTHO05D005070 3.7e-27 125.9 104 67.3
FAN09G2523 Fragaria x ananassa HOM05D004404 ORTHO05D005070 3.7e-27 125.9 104 67.3
FAN14G0219 Fragaria x ananassa HOM05D004404 ORTHO05D005070 3.7e-27 125.9 104 67.3
MSTRG.20447 Avicennia marina HOM05D004404 ORTHO05D005070 4.8e-27 125.6 106 69.8
Gohir.D13G175500 Gossypium hirsutum HOM05D004404 ORTHO05D005070 6.3e-27 125.2 113 63.7
Hma1.2p1_0083F.1_g042910 Hydrangea macrophylla HOM05D004404 ORTHO05D005070 6.3e-27 125.2 90 75.6
Hma1.2p1_0817F.1_g223110 Hydrangea macrophylla HOM05D004404 ORTHO05D005070 8.2e-27 124.8 94 75.5
MD04G1224600 Malus domestica HOM05D004404 ORTHO05D005070 8.2e-27 124.8 124 60.5
RcHm_v2.0_Chr3g0451121 Rosa chinensis HOM05D004404 ORTHO05D005070 8.2e-27 124.8 121 57.9
Glyma.19G244900 Glycine max HOM05D004404 ORTHO05D005070 1.1e-26 124.4 130 56.9
FAN02G1710 Fragaria x ananassa HOM05D004404 ORTHO05D005070 2.4e-26 123.2 104 65.4
Lsat_1_v5_gn_5_40280 Lactuca sativa HOM05D004404 ORTHO05D005070 4.1e-26 122.5 92 73.9
Sc09g0003920 Simmondsia chinensis HOM05D004404 ORTHO05D005070 5.3e-26 122.1 105 66.7
TWI56G0209 Tripterygium wilfordii HOM05D004404 ORTHO05D005070 5.3e-26 122.1 90 73.3
TAR633G0732 Trochodendron aralioides HOM05D004404 ORTHO05D005070 5.3e-26 122.1 97 72.2
vmacro13827 Vaccinium macrocarpon HOM05D004404 ORTHO05D005070 5.3e-26 122.1 104 69.2
CAN.G134.95 Capsicum annuum HOM05D004404 ORTHO05D005070 7.0e-26 121.7 104 65.4
Haze_04360 Corylus avellana HOM05D004404 ORTHO05D005070 7.0e-26 121.7 131 57.3
HanXRQChr05g0158351 Helianthus annuus HOM05D004404 ORTHO05D005070 7.0e-26 121.7 92 73.9
Dinv10012 Davidia involucrata HOM05D004404 ORTHO05D005070 9.1e-26 121.3 139 54.7
Duzib177G0223 Durio zibethinus HOM05D004404 ORTHO05D005070 9.1e-26 121.3 106 67.9
Oeu027474.1 Olea europaea HOM05D004404 ORTHO05D005070 1.6e-25 120.6 111 62.2
Rhsim07G0075300 Rhododendron simsii HOM05D004404 ORTHO05D005070 2.0e-25 120.2 101 71.3
DCAR_006653 Daucus carota HOM05D004404 ORTHO05D005070 2.7e-25 119.8 101 68.3
MBI11_g15915_MAGBIO Magnolia biondii HOM05D004404 ORTHO05D005070 2.7e-25 119.8 112 62.5
GSVIVG01021788001 Vitis vinifera HOM05D004404 ORTHO05D005070 2.7e-25 119.8 98 68.4
arahy.Tifrunner.gnm1.ann1.E7WHUM Arachis hypogaea HOM05D004404 ORTHO05D005070 4.5e-25 119.0 118 63.6
arahy.Tifrunner.gnm1.ann1.Z087RK Arachis hypogaea HOM05D004404 ORTHO05D005070 4.5e-25 119.0 119 63.0
MELO3C015378.2 Cucumis melo HOM05D004404 ORTHO05D005070 4.5e-25 119.0 91 71.4
CsaV3_1G039570 Cucumis sativus L. HOM05D004404 ORTHO05D005070 4.5e-25 119.0 91 71.4
ECA246G2005 Erigeron canadensis HOM05D004404 ORTHO05D005070 4.5e-25 119.0 101 68.3
Lalb_Chr02g0148831 Lupinus albus HOM05D004404 ORTHO05D005070 4.5e-25 119.0 105 60.0
Phvul.006G101800 Phaseolus vulgaris HOM05D004404 ORTHO05D005070 4.5e-25 119.0 91 71.4
Psat3g007120 Pisum sativum HOM05D004404 ORTHO05D005070 4.5e-25 119.0 90 72.2
TPR.G6977 Trifolium pratense HOM05D004404 ORTHO05D005070 4.5e-25 119.0 90 73.3
PGSC0003DMG400019456 Solanum tuberosum HOM05D004404 ORTHO05D005070 5.9e-25 118.6 193 45.6
Ca_10045_v3 Cicer arietinum L. HOM05D004404 ORTHO05D005070 7.7e-25 118.2 102 66.7
ECA240G2961 Erigeron canadensis HOM05D004404 ORTHO05D005070 7.7e-25 118.2 114 62.3
PGR004G0701 Punica granatum HOM05D004404 ORTHO05D005070 7.7e-25 118.2 121 62.8
Sed0025331 Sechium edule HOM05D004404 ORTHO05D005070 7.7e-25 118.2 99 66.7
Psat6g144600 Pisum sativum HOM05D004404 ORTHO05D005070 1.0e-24 117.9 104 64.4
Ca_09422_v3 Cicer arietinum L. HOM05D001346 ORTHO05D001205 2.2e-24 116.7 91 70.3
Duzib106G1455 Durio zibethinus HOM05D004404 ORTHO05D005070 2.2e-24 116.7 107 65.4
VMungo0540G1464 Vigna mungo HOM05D004404 ORTHO05D005070 2.2e-24 116.7 91 71.4
Glyma.03G247200 Glycine max HOM05D004404 ORTHO05D005070 3.8e-24 115.9 102 65.7
Actinidia32805 Actinidia chinensis HOM05D004404 ORTHO05D005070 5.0e-24 115.5 129 54.3
MBI04_g08412_MAGBIO Magnolia biondii HOM05D004404 ORTHO05D005070 5.0e-24 115.5 105 65.7
Manes.08G134600 Manihot esculenta HOM05D004404 ORTHO05D005070 5.0e-24 115.5 105 62.9
Nitab4.5_0001592g0040 Nicotiana tabacum HOM05D004404 ORTHO05D005070 6.5e-24 115.2 100 65.0
Sed0027735 Sechium edule HOM05D004404 ORTHO05D005070 6.5e-24 115.2 107 66.4
TAR365G1136 Trochodendron aralioides HOM05D004404 ORTHO05D005070 4.2e-23 112.5 92 67.4
Sed0023665 Sechium edule HOM05D004404 ORTHO05D005070 5.5e-23 112.1 91 68.1
ATR0665G151 Amborella trichopoda HOM05D004404 ORTHO05D005070 9.4e-23 111.3 92 67.4
Cpa.g.sc117.91 Carica papaya HOM05D004404 ORTHO05D005070 9.4e-23 111.3 92 69.6
Glyma.10G162200 Glycine max HOM05D004404 ORTHO05D005070 9.4e-23 111.3 103 64.1
Lj1g0028137 Lotus japonicus HOM05D004404 ORTHO05D005070 9.4e-23 111.3 100 69.0
Lj5g0014543 Lotus japonicus HOM05D004404 ORTHO05D005070 9.4e-23 111.3 91 67.0
Hund22096 Selenicereus undatus HOM05D004404 ORTHO05D005070 9.4e-23 111.3 107 57.9
Lalb_Chr21g0310981 Lupinus albus HOM05D004404 ORTHO05D005070 1.6e-22 110.5 105 54.3
Hund06970 Selenicereus undatus HOM05D004404 ORTHO05D005070 1.6e-22 110.5 101 63.4
Sabra13G0037800 Salix brachista HOM05D004404 ORTHO05D005070 2.1e-22 110.2 244 38.9
Medtr1g080910 Medicago truncatula HOM05D004404 ORTHO05D005070 2.7e-22 109.8 88 70.5
CDE07G0487 Ceratophyllum demersum HOM05D004404 ORTHO05D005070 3.6e-22 109.4 116 56.9
Thecc.05G283400 Theobroma cacao HOM05D004404 ORTHO05D005070 4.7e-22 109.0 122 59.0
Cfa006425 Carpinus fangiana HOM05D004404 ORTHO05D005070 6.1e-22 108.6 105 61.9
THA.LOC104821674 Tarenaya hassleriana HOM05D004404 ORTHO05D005070 8.0e-22 108.2 105 61.9
HPP92_017518 Vanilla planifolia HOM05D004404 ORTHO05D005070 3.0e-21 106.3 120 57.5
Aqoxy5G00363 Aquilegia oxysepala HOM05D004404 ORTHO05D005070 4.0e-21 105.9 105 66.7
TPR.G12949 Trifolium pratense HOM05D001346 ORTHO05D001205 5.2e-21 105.5 99 61.6
Ah.04g162340 Amaranthus hybridus HOM05D004404 ORTHO05D005070 6.8e-21 105.1 107 62.6
AL6G40780 Arabidopsis lyrata HOM05D004404 ORTHO05D005070 6.8e-21 105.1 105 59.0
Dinv04734 Davidia involucrata HOM05D004404 ORTHO05D005070 8.8e-21 104.8 87 67.8
CDE07G0557 Ceratophyllum demersum HOM05D004404 ORTHO05D005070 1.5e-20 104.0 126 51.6
AUR62001008 Chenopodium quinoa HOM05D004404 ORTHO05D005070 1.5e-20 104.0 103 62.1
THA.LOC104805820 Tarenaya hassleriana HOM05D004404 ORTHO05D005070 2.0e-20 103.6 93 65.6
Carub.0006s2600 Capsella rubella HOM05D004404 ORTHO05D005070 2.6e-20 103.2 105 58.1
Gohir.A13G170100 Gossypium hirsutum HOM05D004404 ORTHO05D005070 2.6e-20 103.2 87 64.4
HanXRQChr09g0258871 Helianthus annuus HOM05D004404 ORTHO05D005070 3.4e-20 102.8 89 62.9
Sp2g20060 Schrenkiella parvula HOM05D004404 ORTHO05D005070 3.4e-20 102.8 97 61.9
AT5G28750 Arabidopsis thaliana HOM05D004404 ORTHO05D005070 4.4e-20 102.4 92 63.0
COL.COLO4_15349 Corchorus olitorius HOM05D004404 ORTHO05D005070 4.4e-20 102.4 136 52.9
Lsat_1_v5_gn_8_115981 Lactuca sativa HOM05D004404 ORTHO05D005070 4.4e-20 102.4 92 66.3
EL10Ac4g09141 Beta vulgaris HOM05D004404 ORTHO05D005070 5.7e-20 102.1 111 59.5
CARHR185320 Cardamine hirsuta HOM05D004404 ORTHO05D005070 5.7e-20 102.1 105 56.2
unitig_899.g14740 Utricularia gibba HOM05D000778 ORTHO05D005070 9.8e-20 101.3 118 58.5
BcaC06g30686 Brassica carinata HOM05D004404 ORTHO05D005070 1.3e-19 100.9 106 55.7
BcaNung02110 Brassica carinata HOM05D004404 ORTHO05D005070 1.3e-19 100.9 110 55.5
A06p38070 Brassica napus HOM05D004404 ORTHO05D005070 1.3e-19 100.9 106 56.6
C07p40140 Brassica napus HOM05D004404 ORTHO05D005070 1.3e-19 100.9 110 55.5
BolC7t44551H Brassica oleracea HOM05D004404 ORTHO05D005070 1.3e-19 100.9 106 56.6
BraA06t26722Z Brassica rapa HOM05D004404 ORTHO05D005070 1.3e-19 100.9 106 56.6
Thhalv10005085m.g Eutrema salsugineum HOM05D004404 ORTHO05D005070 1.3e-19 100.9 105 60.0
Zm00001eb218840 Zea mays HOM05D004404 ORTHO05D005070 1.3e-19 100.9 120 54.2
CDE04G3433 Ceratophyllum demersum HOM05D004404 ORTHO05D005070 1.7e-19 100.5 116 55.2
BolC2t11835H Brassica oleracea HOM05D004404 ORTHO05D005070 2.8e-19 99.8 75 70.7
BcaB04g19631 Brassica carinata HOM05D004404 ORTHO05D005070 6.3e-19 98.6 88 63.6
Sed0015873 Sechium edule HOM05D004404 ORTHO05D005070 1.1e-18 97.8 91 62.6
A09p04970 Brassica napus HOM05D004404 ORTHO05D005070 1.4e-18 97.4 105 59.0
PSO461G0019 Papaver somniferum HOM05D004404 ORTHO05D005070 1.4e-18 97.4 92 58.7
BcaC04g23722 Brassica carinata HOM05D004404 ORTHO05D005070 2.4e-18 96.7 92 62.0
C02p57620 Brassica napus HOM05D004404 ORTHO05D005070 2.4e-18 96.7 101 58.4
C09p05370 Brassica napus HOM05D004404 ORTHO05D005070 2.4e-18 96.7 92 62.0
BolC9t53465H Brassica oleracea HOM05D004404 ORTHO05D005070 2.4e-18 96.7 92 62.0
Os03g0634000 Oryza sativa ssp. japonica HOM05D004404 ORTHO05D005070 9.1e-18 94.7 96 58.3
PSO210G4542 Papaver somniferum HOM05D004404 ORTHO05D005070 9.1e-18 94.7 92 58.7
Prupe.6G343300 Prunus persica HOM05D004404 ORTHO05D005070 9.1e-18 94.7 100 55.0
PSO210G4640 Papaver somniferum HOM05D004404 ORTHO05D005070 1.2e-17 94.4 56 82.1
COL.COLO4_00126 Corchorus olitorius HOM05D004404 ORTHO05D005070 3.5e-17 92.8 116 52.6
Mapoly0001s0151 Marchantia polymorpha HOM05D004404 ORTHO05D005070 4.5e-17 92.4 116 55.2
PSO832G3549 Papaver somniferum HOM05D004404 ORTHO05D005070 4.5e-17 92.4 56 80.4
QL03p026586 Quercus lobata HOM05D004404 ORTHO05D005070 4.5e-17 92.4 86 57.0
Aa31LG11G8580 Aethionema arabicum HOM05D004404 ORTHO05D005070 5.9e-17 92.0 131 48.1
QL03p025881 Quercus lobata HOM05D004404 ORTHO05D005070 7.7e-17 91.7 54 81.5
A02p38290 Brassica napus HOM05D004404 ORTHO05D005070 1.0e-16 91.3 72 66.7
ClCG03G016400 Citrullus lanatus HOM05D004404 ORTHO05D005070 1.7e-16 90.5 227 38.3
SEGI_08397 Sequoiadendron giganteum HOM05D004404 ORTHO05D005070 1.7e-16 90.5 92 57.6
AagrBONN_evm.TU.Sc2ySwM_117.2792 Anthoceros agrestis HOM05D004404 ORTHO05D005070 2.9e-16 89.7 95 56.8
SMO174G0006 Selaginella moellendorffii HOM05D004404 ORTHO05D005070 5.0e-16 89.0 90 61.1
Cre10.g438550 Chlamydomonas reinhardtii HOM05D004404 ORTHO05D005070 1.1e-15 87.8 109 50.5
Aqoxy2G03510 Aquilegia oxysepala HOM05D004404 ORTHO05D005070 1.9e-15 87.0 82 56.1
Glyma.20G224600 Glycine max HOM05D004404 ORTHO05D005070 1.9e-15 87.0 100 53.0
Pp3c8_14190 Physcomitrium patens HOM05D004404 ORTHO05D005070 5.5e-15 85.5 125 45.6
Zm00001eb051040 Zea mays HOM05D004404 ORTHO05D005070 7.2e-15 85.1 46 87.0
CBR_g20020 Chara braunii HOM05D004404 ORTHO05D005070 9.5e-15 84.7 94 57.4
Pp3c15_9990 Physcomitrium patens HOM05D004404 ORTHO05D005070 1.6e-14 84.0 101 58.4
MCO09G790 Micromonas commoda HOM05D004404 ORTHO05D005070 3.6e-14 82.8 84 54.8
Potri.013G040900 Populus trichocarpa HOM05D004404 ORTHO05D005070 1.0e-13 81.3 76 59.2
BcaC03g17750 Brassica carinata HOM05D004404 ORTHO05D005070 1.4e-13 80.9 101 50.5
MD16G1158600 Malus domestica HOM05D004404 ORTHO05D005070 4.0e-13 79.3 60 63.3
Nitab4.5_0013900g0010 Nicotiana tabacum HOM05D004404 ORTHO05D005070 2.0e-12 77.0 102 50.0
SGA_v2.0_scaffold55G19806 Striga asiatica HOM05D004404 ORTHO05D005070 4.9e-11 72.4 42 83.3
BraA02t08810Z Brassica rapa HOM05D004404 ORTHO05D005070 3.8e-08 62.8 77 57.1
Migut.F01097 Erythranthe guttata HOM05D005376 ORTHO05D006481 2.5e-07 60.1 96 34.4
Os11g0580800 Oryza sativa ssp. japonica HOM05D005376 ORTHO05D006481 7.3e-07 58.5 72 48.6
Ciclev10005655m.g Citrus clementina HOM05D005376 ORTHO05D006481 9.5e-07 58.2 119 33.6
Manes.06G150900 Manihot esculenta HOM05D005376 ORTHO05D006481 1.2e-06 57.8 114 36.0
CDE09G0642 Ceratophyllum demersum HOM05D005376 ORTHO05D006481 2.1e-06 57.0 90 41.1
CBR_g49097 Chara braunii HOM05D005376 ORTHO05D006481 2.1e-06 57.0 99 40.4
Cfa016268 Carpinus fangiana HOM05D005376 ORTHO05D006481 2.8e-06 56.6 136 33.1
FAN03G2197 Fragaria x ananassa HOM05D005376 ORTHO05D006481 4.7e-06 55.8 101 36.6
ECA232G4406 Erigeron canadensis HOM05D005376 ORTHO05D006481 6.1e-06 55.5 55 49.1
FAN01G1606 Fragaria x ananassa HOM05D005376 ORTHO05D006481 6.1e-06 55.5 101 36.6
FAN03G2430 Fragaria x ananassa HOM05D005376 ORTHO05D006481 6.1e-06 55.5 101 36.6
MBI17_g35259_MAGBIO Magnolia biondii HOM05D005376 ORTHO05D006481 8.0e-06 55.1 104 31.7
SalBow4G0945 Salvia bowleyana HOM05D005376 ORTHO05D006481 8.0e-06 55.1 74 45.9


User provided reference genes

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