Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 4.6e-107 391.3 215 100.0
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 6.6e-53 211.5 163 61.3
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 5.2e-50 201.8 134 70.1
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 8.9e-50 201.1 150 61.3
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 2.0e-49 199.9 145 66.2
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 4.4e-49 198.7 171 57.9
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 4.4e-49 198.7 174 54.6
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 7.5e-49 198.0 174 56.3
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 3.7e-48 195.7 145 62.8
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 2.7e-46 189.5 172 55.8
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 4.6e-46 188.7 174 56.3
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 1.0e-45 187.6 137 60.6
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 1.3e-45 187.2 162 54.9
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 2.3e-45 186.4 151 58.9
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.5e-44 183.0 123 65.9
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 5.6e-44 181.8 177 53.7
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.2e-43 180.6 179 51.4
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 1.6e-43 180.3 190 47.4
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 1.6e-43 180.3 145 58.6
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.6e-43 179.1 179 50.3
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 3.6e-43 179.1 179 50.3
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 4.7e-43 178.7 184 49.5
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 6.2e-43 178.3 172 52.9
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 1.1e-42 177.6 151 56.3
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 1.1e-42 177.6 167 53.9
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 3.1e-42 176.0 180 51.7
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 8.9e-42 174.5 183 49.7
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 1.2e-41 174.1 170 51.2
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 2.0e-41 173.3 172 51.2
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 3.4e-41 172.6 183 49.2
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 1.3e-40 170.6 168 50.0
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 8.3e-40 167.9 184 47.3
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 1.1e-39 167.5 183 48.6
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 5.1e-37 158.7 188 46.3
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 2.1e-35 153.3 181 46.4
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 1.4e-31 140.6 174 43.7
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 1.0e-29 134.4 125 48.0
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 1.7e-29 133.7 239 37.2
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 2.3e-29 133.3 151 42.4
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 7.3e-28 128.3 180 39.4
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 1.6e-27 127.1 179 37.4
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 8.1e-27 124.8 113 47.8
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 1.4e-26 124.0 115 47.8
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 1.4e-26 124.0 115 47.8
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 1.4e-26 124.0 115 47.8
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 1.4e-26 124.0 113 47.8
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 2.4e-26 123.2 113 46.9
TPR.G38724 Trifolium pratense HOM05D003324 ORTHO05D006468 3.4e-25 119.4 148 49.3
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 3.8e-24 115.9 173 40.5
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 4.2e-23 112.5 126 45.2
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 5.4e-23 112.1 164 37.8
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 2.1e-22 110.2 172 37.8
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 2.7e-22 109.8 106 46.2
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 2.7e-22 109.8 174 37.4
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 3.5e-22 109.4 173 35.8
Duzib192G0394 Durio zibethinus HOM05D005772 ORTHO05D006468 6.0e-22 108.6 137 45.3
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 1.7e-21 107.1 124 41.1
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 1.7e-21 107.1 124 41.1
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 2.3e-21 106.7 178 38.2
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 3.0e-21 106.3 175 36.6
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 6.6e-21 105.1 126 42.1
Haze_16205 Corylus avellana HOM05D005772 ORTHO05D006468 6.6e-21 105.1 102 52.9
FvH4_6g36610 Fragaria vesca HOM05D005772 ORTHO05D006468 8.7e-21 104.8 119 48.7
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.1e-20 104.4 168 35.7
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 1.9e-20 103.6 166 36.7
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 9.6e-20 101.3 169 37.9
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.3e-19 100.9 170 35.9
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 1.3e-19 100.9 126 42.1
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 2.1e-19 100.1 178 37.1
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 3.6e-19 99.4 142 35.9
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 6.2e-19 98.6 126 39.7
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 6.2e-19 98.6 191 34.0
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 1.1e-18 97.8 188 36.2
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 1.1e-18 97.8 172 35.5
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 1.8e-18 97.1 188 35.6
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 1.8e-18 97.1 176 34.1
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 1.8e-18 97.1 127 41.7
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 1.8e-18 97.1 175 35.4
Atru.chr1.2602 Acer truncatum HOM05D005772 ORTHO05D006468 2.4e-18 96.7 70 61.4
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 4.0e-18 95.9 183 36.1
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 4.0e-18 95.9 147 36.7
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 1.2e-17 94.4 178 36.0
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 1.2e-17 94.4 133 38.3
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 1.5e-17 94.0 117 42.7
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 2.0e-17 93.6 173 35.8
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 2.0e-17 93.6 173 31.8
Zm00001eb215960 Zea mays HOM05D046982 ORTHO05D006468 3.4e-17 92.8 125 39.2
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 5.8e-17 92.0 123 41.5
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 7.6e-17 91.7 174 33.3
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 7.6e-17 91.7 181 34.3
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 1.3e-16 90.9 146 37.0
Eucgr.A00749 Eucalyptus grandis HOM05D005772 ORTHO05D006468 1.3e-16 90.9 126 41.3
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.3e-16 90.9 172 32.0
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 2.2e-16 90.1 117 40.2
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.9e-16 89.7 130 37.7
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 3.8e-16 89.4 176 34.1
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 4.9e-16 89.0 148 39.9
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 1.2e-14 84.3 118 37.3
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 1.6e-14 84.0 119 37.8
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 3.5e-14 82.8 151 37.7
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 6.0e-14 82.0 176 32.4
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 7.9e-14 81.6 108 40.7
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 2.3e-13 80.1 175 30.3
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 3.0e-13 79.7 132 31.1
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 3.9e-13 79.3 126 33.3
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 2.5e-12 76.6 140 32.9
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 4.3e-12 75.9 118 32.2
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 1.6e-11 73.9 172 28.5
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 2.1e-11 73.6 118 31.4
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 4.8e-11 72.4 127 30.7
FvH4_4g20570 Fragaria vesca HOM05D005956 ORTHO05D006468 8.1e-11 71.6 95 40.0
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 1.1e-10 71.2 118 30.5
MD04G1024400 Malus domestica HOM05D005772 ORTHO05D006468 1.1e-10 71.2 78 43.6
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 1.4e-10 70.9 119 29.4
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 1.4e-10 70.9 82 41.5
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 6.9e-10 68.6 128 28.1
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 9.0e-10 68.2 103 29.1
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.5e-09 67.4 177 28.8
SGA_v2.0_scaffold2751G54198 Striga asiatica HOM05D005772 ORTHO05D006468 1.3e-08 64.3 120 40.0
Dinv20324 Davidia involucrata HOM05D005772 ORTHO05D006468 2.9e-08 63.2 179 34.6
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 6.4e-08 62.0 100 32.0
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 1.4e-07 60.8 132 36.4
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 1.6e-06 57.4 84 28.6
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 2.7e-06 56.6 68 41.2
ATR0709G081 Amborella trichopoda HOM05D005772 ORTHO05D006468 6.0e-06 55.5 130 35.4
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 6.0e-06 55.5 131 29.8


User provided reference genes

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